Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG06G013380 Citrullus lanatus HOM05D015664 ORTHO05D008524 8.3e-97 357.1 185 100.0
MELO3C017459.2 Cucumis melo HOM05D015664 ORTHO05D008524 1.9e-69 266.2 189 81.0
CsaV3_1G031630 Cucumis sativus L. HOM05D015664 ORTHO05D008524 1.6e-60 236.5 188 71.8
Sed0025640 Sechium edule HOM05D015664 ORTHO05D008524 5.0e-49 198.4 187 64.7
Sed0007534 Sechium edule HOM05D015664 ORTHO05D008524 3.3e-45 185.7 193 61.7
CiPaw.08G035800 Carya illinoinensis HOM05D007262 ORTHO05D008524 7.0e-11 71.6 189 38.1
Atru.chr7.610 Acer truncatum HOM05D015664 ORTHO05D008524 1.2e-10 70.9 67 47.8
Atru.chr7.612 Acer truncatum HOM05D007262 ORTHO05D008524 4.5e-10 68.9 109 41.3
Cfa013501 Carpinus fangiana HOM05D007262 ORTHO05D008524 2.9e-09 66.2 152 36.8
CiPaw.07G192600 Carya illinoinensis HOM05D007262 ORTHO05D008524 2.9e-09 66.2 114 40.4
Hma1.2p1_0900F.1_g234550 Hydrangea macrophylla HOM05D007262 ORTHO05D008524 2.9e-09 66.2 157 35.0
COL.COLO4_28647 Corchorus olitorius HOM05D015664 ORTHO05D008524 3.8e-09 65.9 141 34.8
Prupe.1G085200 Prunus persica HOM05D007262 ORTHO05D008524 8.6e-09 64.7 146 34.2
Haze_22091 Corylus avellana HOM05D007262 ORTHO05D008524 1.5e-08 63.9 159 34.6
Potri.006G167300 Populus trichocarpa HOM05D007262 ORTHO05D008524 2.5e-08 63.2 102 38.2
TAR383G0997 Trochodendron aralioides HOM05D007262 ORTHO05D008524 2.5e-08 63.2 147 36.1
Ciclev10010707m.g Citrus clementina HOM05D007262 ORTHO05D008524 3.2e-08 62.8 116 36.2
Potri.018G091900 Populus trichocarpa HOM05D007262 ORTHO05D008524 3.2e-08 62.8 103 39.8
Nn8g40468 Nelumbo nucifera HOM05D007262 ORTHO05D008524 9.5e-08 61.2 173 34.7
Thecc.09G176800 Theobroma cacao HOM05D007262 ORTHO05D008524 9.5e-08 61.2 180 32.8
Gorai.013G246500 Gossypium raimondii HOM05D007262 ORTHO05D008524 1.2e-07 60.8 155 33.5
Gohir.D13G216200 Gossypium hirsutum HOM05D007262 ORTHO05D008524 1.6e-07 60.5 155 34.2
Hma1.2p1_1025F.1_g249350 Hydrangea macrophylla HOM05D007262 ORTHO05D008524 1.6e-07 60.5 105 39.0
COL.COLO4_37717 Corchorus olitorius HOM05D007262 ORTHO05D008524 3.6e-07 59.3 172 34.3
Lsat_1_v5_gn_7_54640 Lactuca sativa HOM05D007262 ORTHO05D008524 3.6e-07 59.3 100 37.0
Sc08g0005310 Simmondsia chinensis HOM05D007262 ORTHO05D008524 3.6e-07 59.3 186 32.3
Sabra06G0129200 Salix brachista HOM05D007262 ORTHO05D008524 6.1e-07 58.5 149 30.9
Rhsim01G0003900 Rhododendron simsii HOM05D000138 ORTHO05D000078 8.0e-07 58.2 102 31.4
CsaV3_1G031620 Cucumis sativus L. HOM05D007262 ORTHO05D008524 1.0e-06 57.8 92 43.5
Duzib128G1044 Durio zibethinus HOM05D015664 ORTHO05D008524 1.0e-06 57.8 177 36.2
Gohir.A13G212100 Gossypium hirsutum HOM05D007262 ORTHO05D008524 1.0e-06 57.8 161 33.5
Glyma.13G096700 Glycine max HOM05D007262 ORTHO05D008524 2.3e-06 56.6 100 41.0
Prupe.1G085100 Prunus persica HOM05D015664 ORTHO05D008524 2.3e-06 56.6 219 30.6
QL02p097844 Quercus lobata HOM05D007262 ORTHO05D008524 4.0e-06 55.8 189 30.2
COL.COLO4_37718 Corchorus olitorius HOM05D018436 ORTHO05D008524 5.2e-06 55.5 82 41.5
Sabra18G0079000 Salix brachista HOM05D007262 ORTHO05D008524 6.8e-06 55.1 176 29.0
CSS0001479 Camellia sinensis var. sinensis HOM05D007262 ORTHO05D008524 8.8e-06 54.7 148 30.4


User provided reference genes

Program Settings