Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 9.4e-212 740.0 381 100.0
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 2.7e-190 668.7 381 90.8
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 3.5e-190 668.3 381 90.3
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 1.2e-134 483.8 279 82.8
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 5.6e-132 474.9 371 65.8
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 2.8e-131 472.6 382 63.6
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 1.8e-130 469.9 390 63.6
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 3.1e-130 469.2 380 63.2
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 9.0e-130 467.6 383 64.8
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 1.5e-129 466.8 380 63.7
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 5.8e-129 464.9 370 64.1
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 4.9e-128 461.8 370 63.5
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 1.4e-127 460.3 373 64.9
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 2.5e-127 459.5 384 61.7
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 3.2e-127 459.1 347 66.6
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 3.2e-127 459.1 384 63.0
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 9.3e-127 457.6 376 63.6
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 9.3e-127 457.6 374 62.0
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 3.5e-126 455.7 366 64.5
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 4.6e-126 455.3 354 64.4
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 3.0e-125 452.6 383 62.7
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 8.7e-125 451.1 372 62.6
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.1e-124 450.7 382 60.7
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 2.5e-124 449.5 395 58.7
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 3.3e-124 449.1 366 62.6
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 4.3e-124 448.7 370 62.2
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 9.7e-124 447.6 366 63.1
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 1.1e-122 444.1 359 62.4
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 5.3e-122 441.8 382 59.9
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 6.9e-122 441.4 375 61.6
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 6.9e-122 441.4 375 61.6
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 2.6e-121 439.5 373 60.6
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 3.4e-121 439.1 374 61.0
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 2.9e-120 436.0 375 60.5
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 3.8e-120 435.6 394 57.1
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 5.0e-120 435.3 379 61.2
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 1.4e-119 433.7 375 61.1
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 2.5e-119 433.0 365 62.2
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 3.2e-119 432.6 370 61.1
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 5.5e-119 431.8 375 61.6
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 7.2e-119 431.4 375 58.4
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 9.4e-119 431.0 378 58.5
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 3.0e-117 426.0 373 59.2
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 2.5e-116 422.9 390 56.9
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 9.7e-116 421.0 380 57.6
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 1.7e-115 420.2 325 65.8
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 4.8e-115 418.7 363 59.8
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 9.1e-114 414.5 370 60.8
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 6.5e-112 408.3 372 56.2
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 1.1e-111 407.5 372 57.8
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 1.1e-111 407.5 365 57.3
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 1.4e-111 407.1 376 57.2
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 3.2e-111 406.0 363 57.0
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 5.5e-111 405.2 373 59.0
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 1.2e-110 404.1 437 51.0
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 2.1e-110 403.3 342 60.5
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 1.0e-109 401.0 392 54.3
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 1.4e-109 400.6 364 56.3
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 1.8e-109 400.2 363 57.3
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 3.0e-109 399.4 363 57.3
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 2.6e-108 396.4 370 57.6
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 3.3e-108 396.0 367 58.0
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 3.3e-108 396.0 340 57.1
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 4.4e-108 395.6 377 54.6
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 5.7e-108 395.2 372 54.6
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 2.2e-107 393.3 297 65.7
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 6.3e-107 391.7 381 55.4
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 6.3e-107 391.7 374 53.2
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 1.4e-106 390.6 375 56.0
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 1.8e-106 390.2 377 56.0
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 2.4e-106 389.8 363 57.0
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 5.3e-106 388.7 374 54.8
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 2.0e-105 386.7 335 58.5
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 2.6e-105 386.3 393 52.7
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 3.5e-105 386.0 363 55.1
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 4.5e-105 385.6 363 55.1
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 1.3e-104 384.0 363 54.8
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 1.7e-104 383.6 369 56.4
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 2.2e-104 383.3 330 60.0
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 8.5e-104 381.3 367 55.3
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 2.5e-103 379.8 370 57.3
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 3.2e-103 379.4 373 55.2
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 4.2e-103 379.0 376 54.5
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 1.4e-101 374.0 353 55.2
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 1.1e-100 370.9 346 56.6
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 1.6e-97 360.5 290 61.7
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 2.0e-97 360.1 301 60.5
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 1.1e-95 354.4 265 66.8
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 1.9e-95 353.6 244 70.5
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 7.2e-95 351.7 273 62.3
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 9.4e-95 351.3 382 51.6
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 1.2e-92 344.4 282 60.3
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 3.4e-92 342.8 342 52.6
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 8.3e-91 338.2 342 52.0
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 2.7e-89 333.2 369 49.1
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 1.0e-88 331.3 239 68.6
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 1.1e-87 327.8 415 45.5
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 8.0e-86 321.6 314 54.8
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 5.4e-82 308.9 240 63.3
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 1.2e-78 297.7 319 49.2
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 2.0e-76 290.4 323 48.0
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 2.6e-76 290.0 208 64.9
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 2.0e-73 280.4 171 73.1
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 1.5e-68 264.2 334 47.0
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 3.4e-68 263.1 300 47.7
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 5.0e-64 249.2 294 47.3
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 3.6e-54 216.5 254 45.7
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 4.1e-50 203.0 188 60.6
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 4.1e-50 203.0 140 72.9
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 3.4e-44 183.3 137 62.8
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 2.9e-43 180.3 324 36.1
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 1.1e-39 168.3 207 43.0
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 1.3e-35 154.8 232 40.1
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 9.9e-28 128.6 186 39.2
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 8.4e-27 125.6 71 78.9
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 2.7e-17 94.0 103 49.5
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 6.5e-11 72.8 55 58.2
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 9.3e-10 68.9 67 47.8
Nn2g16007 Nelumbo nucifera HOM05D006491 ORTHO05D008412 9.7e-07 58.9 88 44.3


User provided reference genes

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