Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG06G012660 Citrullus lanatus HOM05D007659 ORTHO05D009227 1.4e-63 246.1 128 100.0
CsaV3_1G029210 Cucumis sativus L. HOM05D007659 ORTHO05D009227 6.0e-54 214.2 128 89.1
MELO3C010198.2 Cucumis melo HOM05D007659 ORTHO05D009227 5.1e-53 211.1 131 87.0
Sed0026034 Sechium edule HOM05D007659 ORTHO05D009227 4.3e-44 181.4 122 78.7
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 2.8e-27 125.6 121 54.5
RcHm_v2.0_Chr4g0405451 Rosa chinensis HOM05D007659 ORTHO05D009227 4.8e-27 124.8 125 57.6
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 8.2e-27 124.0 126 54.0
FAN07G1615 Fragaria x ananassa HOM05D007659 ORTHO05D009227 5.3e-26 121.3 101 63.4
MD12G1196500 Malus domestica HOM05D007659 ORTHO05D009227 3.5e-25 118.6 129 56.6
FvH4_4g09760 Fragaria vesca HOM05D007659 ORTHO05D009227 4.5e-25 118.2 101 61.4
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 7.7e-25 117.5 97 60.8
FAN22G0789 Fragaria x ananassa HOM05D007659 ORTHO05D009227 1.7e-24 116.3 104 59.6
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 2.2e-24 115.9 122 53.3
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 5.0e-24 114.8 121 51.2
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 6.5e-24 114.4 121 53.7
Eucgr.C02516 Eucalyptus grandis HOM05D007659 ORTHO05D009227 1.1e-23 113.6 126 51.6
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 1.5e-23 113.2 119 50.4
Gohir.D05G342500 Gossypium hirsutum HOM05D007659 ORTHO05D009227 2.5e-23 112.5 122 53.3
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 5.5e-23 111.3 97 57.7
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 7.2e-23 110.9 97 57.7
Eucgr.L01549 Eucalyptus grandis HOM05D007659 ORTHO05D009227 7.2e-23 110.9 126 50.8
Gorai.009G368800 Gossypium raimondii HOM05D007659 ORTHO05D009227 7.2e-23 110.9 122 53.3
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 9.4e-23 110.5 97 59.8
Gohir.A04G040700 Gossypium hirsutum HOM05D007659 ORTHO05D009227 2.1e-22 109.4 122 53.3
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 6.1e-22 107.8 79 63.3
Duzib187G1272 Durio zibethinus HOM05D007659 ORTHO05D009227 6.1e-22 107.8 121 51.2
Aqoxy7G03300 Aquilegia oxysepala HOM05D007659 ORTHO05D009227 1.8e-21 106.3 127 44.9
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 2.3e-21 105.9 111 53.2
Haze_19127 Corylus avellana HOM05D007659 ORTHO05D009227 3.0e-21 105.5 119 50.4
Sabra06G0137200 Salix brachista HOM05D007659 ORTHO05D009227 3.0e-21 105.5 121 47.1
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 5.2e-21 104.8 64 73.4
Thecc.09G154300 Theobroma cacao HOM05D007659 ORTHO05D009227 8.8e-21 104.0 79 67.1
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 2.0e-20 102.8 122 51.6
Glyma.17G071000 Glycine max HOM05D007659 ORTHO05D009227 3.3e-20 102.1 105 50.5
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 5.7e-20 101.3 80 60.0
TWI63G1302 Tripterygium wilfordii HOM05D007659 ORTHO05D009227 7.4e-20 100.9 122 49.2
VMungo1215G2964 Vigna mungo HOM05D007659 ORTHO05D009227 7.4e-20 100.9 101 52.5
A03p60380 Brassica napus HOM05D007659 ORTHO05D009227 1.7e-19 99.8 70 62.9
BraA03t15078Z Brassica rapa HOM05D007659 ORTHO05D009227 1.7e-19 99.8 70 62.9
BcaNung02735 Brassica carinata HOM05D007659 ORTHO05D009227 2.2e-19 99.4 77 59.7
Manes.06G031900 Manihot esculenta HOM05D007659 ORTHO05D009227 2.2e-19 99.4 121 43.8
BcaNung01556 Brassica carinata HOM05D007659 ORTHO05D009227 3.7e-19 98.6 70 61.4
Carub.0007s0971 Capsella rubella HOM05D007659 ORTHO05D009227 3.7e-19 98.6 67 64.2
Haze_19130 Corylus avellana HOM05D007659 ORTHO05D009227 8.2e-19 97.4 75 60.0
Lalb_Chr12g0198851 Lupinus albus HOM05D007659 ORTHO05D009227 8.2e-19 97.4 102 50.0
EL10Ac4g09658 Beta vulgaris HOM05D007659 ORTHO05D009227 1.1e-18 97.1 98 49.0
Phvul.003G153300 Phaseolus vulgaris HOM05D007659 ORTHO05D009227 1.1e-18 97.1 100 52.0
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 1.1e-18 97.1 100 54.0
C07p58250 Brassica napus HOM05D007659 ORTHO05D009227 1.4e-18 96.7 77 58.4
BolC7t46283H Brassica oleracea HOM05D007659 ORTHO05D009227 1.4e-18 96.7 77 58.4
Hund07205 Selenicereus undatus HOM05D007659 ORTHO05D009227 1.4e-18 96.7 95 54.7
Cc00_g30920 Coffea canephora HOM05D007659 ORTHO05D009227 1.8e-18 96.3 68 61.8
Thhalv10026581m.g Eutrema salsugineum HOM05D007659 ORTHO05D009227 1.8e-18 96.3 67 64.2
TPR.G24875 Trifolium pratense HOM05D007659 ORTHO05D009227 1.8e-18 96.3 69 63.8
Cc02_g28880 Coffea canephora HOM05D007659 ORTHO05D009227 2.4e-18 95.9 68 61.8
PGR102G1560 Punica granatum HOM05D007659 ORTHO05D009227 2.4e-18 95.9 121 43.8
Psat4g010200 Pisum sativum HOM05D007659 ORTHO05D009227 3.1e-18 95.5 95 52.6
AL7G21270 Arabidopsis lyrata HOM05D007659 ORTHO05D009227 4.1e-18 95.1 104 48.1
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 9.1e-18 94.0 122 46.7
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 9.1e-18 94.0 69 65.2
AT4G30845 Arabidopsis thaliana HOM05D007659 ORTHO05D009227 1.2e-17 93.6 104 47.1
Peaxi162Scf00038g00725 Petunia axillaris HOM05D007659 ORTHO05D009227 1.2e-17 93.6 106 47.2
arahy.Tifrunner.gnm1.ann1.FWLQ6H Arachis hypogaea HOM05D007659 ORTHO05D009227 2.6e-17 92.4 101 48.5
arahy.Tifrunner.gnm1.ann1.KUG4GU Arachis hypogaea HOM05D007659 ORTHO05D009227 2.6e-17 92.4 101 48.5
CARHR238720 Cardamine hirsuta HOM05D007659 ORTHO05D009227 2.6e-17 92.4 67 62.7
Ciclev10009916m.g Citrus clementina HOM05D007659 ORTHO05D009227 2.6e-17 92.4 89 52.8
PSO782G2453 Papaver somniferum HOM05D007659 ORTHO05D009227 2.6e-17 92.4 115 45.2
Aa31LG2G19540 Aethionema arabicum HOM05D007659 ORTHO05D009227 4.5e-17 91.7 111 45.9
MSTRG.6163 Avicennia marina HOM05D007659 ORTHO05D009227 4.5e-17 91.7 119 42.9
Medtr4g130250 Medicago truncatula HOM05D007659 ORTHO05D009227 5.9e-17 91.3 91 49.5
Migut.J01394 Erythranthe guttata HOM05D007659 ORTHO05D009227 7.7e-17 90.9 118 39.0
Lsat_1_v5_gn_7_50920 Lactuca sativa HOM05D007659 ORTHO05D009227 7.7e-17 90.9 101 48.5
HanXRQChr03g0066011 Helianthus annuus HOM05D007659 ORTHO05D009227 1.0e-16 90.5 106 45.3
PGSC0003DMG400011214 Solanum tuberosum HOM05D007659 ORTHO05D009227 1.3e-16 90.1 91 50.5
PSO063G0802 Papaver somniferum HOM05D007659 ORTHO05D009227 1.7e-16 89.7 115 43.5
Ah.06g188510 Amaranthus hybridus HOM05D000987 ORTHO05D000831 2.2e-16 89.4 85 56.5
Lj4g0008058 Lotus japonicus HOM05D007659 ORTHO05D009227 2.9e-16 89.0 94 51.1
Ca_21156_v3 Cicer arietinum L. HOM05D007659 ORTHO05D009227 3.8e-16 88.6 80 52.5
Solyc07g006040.3 Solanum lycopersicum HOM05D007659 ORTHO05D009227 5.0e-16 88.2 120 40.0
Sc06g0005340 Simmondsia chinensis HOM05D007659 ORTHO05D009227 6.5e-16 87.8 114 41.2
THA.LOC104803555 Tarenaya hassleriana HOM05D007659 ORTHO05D009227 8.5e-16 87.4 101 46.5
unitig_736.g22510 Utricularia gibba HOM05D007659 ORTHO05D009227 8.5e-16 87.4 79 50.6
SalBow6G0978 Salvia bowleyana HOM05D007659 ORTHO05D009227 1.5e-15 86.7 102 46.1
CDE04G0159 Ceratophyllum demersum HOM05D007659 ORTHO05D009227 3.2e-15 85.5 61 57.4
Nitab4.5_0016001g0010 Nicotiana tabacum HOM05D007659 ORTHO05D009227 3.2e-15 85.5 55 67.3
Potri.006G180200 Populus trichocarpa HOM05D007659 ORTHO05D009227 3.2e-15 85.5 47 78.7
MD04G1182900 Malus domestica HOM05D007659 ORTHO05D009227 1.6e-14 83.2 52 71.2
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 2.1e-14 82.8 116 43.1
ATR0111G019 Amborella trichopoda HOM05D007659 ORTHO05D009227 1.0e-13 80.5 81 48.1
Os03g0210900 Oryza sativa ssp. japonica HOM05D007659 ORTHO05D009227 8.8e-13 77.4 67 53.7
Zm00001eb400430 Zea mays HOM05D007659 ORTHO05D009227 1.2e-12 77.0 65 53.8
HPP92_006698 Vanilla planifolia HOM05D007659 ORTHO05D009227 3.4e-12 75.5 96 40.6
AagrBONN_evm.TU.Sc2ySwM_228.2308 Anthoceros agrestis HOM05D007659 ORTHO05D009227 2.9e-08 62.4 62 51.6
Pp3c17_8590 Physcomitrium patens HOM05D007659 ORTHO05D009227 3.8e-08 62.0 59 45.8
CBR_g10976 Chara braunii HOM05D007659 ORTHO05D009227 3.2e-07 58.9 51 54.9
Mapoly0004s0134 Marchantia polymorpha HOM05D007659 ORTHO05D009227 1.2e-06 57.0 51 51.0


User provided reference genes

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