Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG06G012090 Citrullus lanatus HOM05D008006 ORTHO05D010181 3.7e-182 641.3 312 100.0
MELO3C010256.2 Cucumis melo HOM05D008006 ORTHO05D010181 7.3e-162 573.9 307 90.2
CsaV3_1G028580 Cucumis sativus L. HOM05D008006 ORTHO05D010181 8.1e-161 570.5 307 90.2
Sed0023235 Sechium edule HOM05D008006 ORTHO05D010181 3.0e-139 498.8 308 80.5
Hma1.2p1_0085F.1_g044170 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 7.5e-98 361.3 314 59.2
Gohir.A06G096100 Gossypium hirsutum HOM05D008006 ORTHO05D010181 4.1e-96 355.5 286 60.5
Prupe.7G252900 Prunus persica HOM05D008006 ORTHO05D010181 7.0e-96 354.8 272 64.3
Haze_19299 Corylus avellana HOM05D008006 ORTHO05D010181 9.1e-96 354.4 290 61.4
Gorai.010G110900 Gossypium raimondii HOM05D008006 ORTHO05D010181 2.7e-95 352.8 286 60.1
Duzib187G1563 Durio zibethinus HOM05D008006 ORTHO05D010181 5.9e-95 351.7 298 59.1
MD15G1157700 Malus domestica HOM05D008006 ORTHO05D010181 5.9e-95 351.7 271 63.8
Cfa020870 Carpinus fangiana HOM05D008006 ORTHO05D010181 7.7e-95 351.3 299 59.5
COL.COLO4_22070 Corchorus olitorius HOM05D008006 ORTHO05D010181 1.7e-94 350.1 298 58.1
CiPaw.15G179000 Carya illinoinensis HOM05D008006 ORTHO05D010181 3.8e-94 349.0 279 62.7
Thecc.09G037000 Theobroma cacao HOM05D008006 ORTHO05D010181 8.5e-94 347.8 289 59.2
Peaxi162Scf00981g00002 Petunia axillaris HOM05D008006 ORTHO05D010181 1.5e-93 347.1 279 61.3
Potri.018G112900 Populus trichocarpa HOM05D008006 ORTHO05D010181 5.5e-93 345.1 281 60.5
Sabra18G0096000 Salix brachista HOM05D008006 ORTHO05D010181 5.5e-93 345.1 287 58.9
PGR142G2664 Punica granatum HOM05D008006 ORTHO05D010181 9.4e-93 344.4 291 60.5
SGA_v2.0_scaffold229G43287 Striga asiatica HOM05D008006 ORTHO05D010181 2.1e-92 343.2 297 58.9
QL02p091617 Quercus lobata HOM05D008006 ORTHO05D010181 2.7e-92 342.8 297 58.9
MSTRG.3655 Avicennia marina HOM05D008006 ORTHO05D010181 6.1e-92 341.7 280 61.4
CAN.G883.7 Capsicum annuum HOM05D008006 ORTHO05D010181 8.0e-92 341.3 297 57.6
Oeu023348.1 Olea europaea HOM05D008006 ORTHO05D010181 1.4e-91 340.5 304 55.3
Nitab4.5_0000973g0020 Nicotiana tabacum HOM05D008006 ORTHO05D010181 2.3e-91 339.7 313 57.5
PGSC0003DMG401009429 Solanum tuberosum HOM05D008006 ORTHO05D010181 2.3e-91 339.7 304 57.9
Nitab4.5_0000443g0190 Nicotiana tabacum HOM05D008006 ORTHO05D010181 3.0e-91 339.3 302 57.0
TAR376G0197 Trochodendron aralioides HOM05D008006 ORTHO05D010181 6.8e-91 338.2 298 58.1
Lsat_1_v5_gn_8_113701 Lactuca sativa HOM05D008006 ORTHO05D010181 2.6e-90 336.3 297 57.9
Dinv19107 Davidia involucrata HOM05D008006 ORTHO05D007530 3.4e-90 335.9 275 61.8
CANSAT11G1793 Cannabis sativa HOM05D008006 ORTHO05D010181 1.7e-89 333.6 287 57.5
Manes.14G140100 Manihot esculenta HOM05D008006 ORTHO05D010181 2.2e-89 333.2 275 60.0
Cc07_g12390 Coffea canephora HOM05D008006 ORTHO05D010181 2.8e-89 332.8 305 56.4
Sopen02g017480 Solanum pennellii HOM05D008006 ORTHO05D010181 3.7e-89 332.4 304 56.6
Phvul.009G208600 Phaseolus vulgaris HOM05D008006 ORTHO05D010181 6.3e-89 331.6 268 60.4
DCAR_005377 Daucus carota HOM05D008006 ORTHO05D010181 1.4e-88 330.5 287 56.1
VMungo1309G1328 Vigna mungo HOM05D008006 ORTHO05D010181 4.1e-88 328.9 268 60.4
Cpa.g.sc46.96 Carica papaya HOM05D008006 ORTHO05D010181 5.4e-88 328.6 306 52.6
MBI04_g23901_MAGBIO Magnolia biondii HOM05D008006 ORTHO05D010181 5.4e-88 328.6 284 56.7
Medtr1g052525 Medicago truncatula HOM05D008006 ORTHO05D010181 2.0e-87 326.6 268 59.0
unitig_0.g2635 Utricularia gibba HOM05D008006 ORTHO05D010181 5.0e-86 322.0 286 56.3
RcHm_v2.0_Chr2g0086431 Rosa chinensis HOM05D008006 ORTHO05D010181 2.5e-85 319.7 284 58.1
QL02p091673 Quercus lobata HOM05D008006 ORTHO05D010181 4.2e-85 318.9 281 57.7
THA.LOC104827422 Tarenaya hassleriana HOM05D008006 ORTHO05D010181 6.1e-84 315.1 276 55.4
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 1.5e-82 310.5 286 54.5
FvH4_1g01510 Fragaria vesca HOM05D008006 ORTHO05D010181 2.6e-82 309.7 285 55.8
Migut.K01160 Erythranthe guttata HOM05D008006 ORTHO05D010181 7.5e-82 308.1 300 55.3
FAN23G1450 Fragaria x ananassa HOM05D008006 ORTHO05D010181 7.5e-82 308.1 285 54.4
FAN28G2644 Fragaria x ananassa HOM05D008006 ORTHO05D010181 1.7e-81 307.0 285 55.8
Sc03g0006000 Simmondsia chinensis HOM05D008006 ORTHO05D010181 3.1e-80 302.8 291 53.6
Ah.07g202950 Amaranthus hybridus HOM05D008006 ORTHO05D010181 9.2e-80 301.2 279 57.7
CSS0020571 Camellia sinensis var. sinensis HOM05D008006 ORTHO05D010181 1.2e-79 300.8 310 53.9
EL10Ac6g14724 Beta vulgaris HOM05D008006 ORTHO05D010181 1.3e-78 297.4 278 56.5
Aqoxy6G02620 Aquilegia oxysepala HOM05D008006 ORTHO05D010181 7.3e-77 291.6 296 53.0
Zm00001eb102080 Zea mays HOM05D008006 ORTHO05D010181 7.3e-77 291.6 288 55.2
HPP92_022771 Vanilla planifolia HOM05D008006 ORTHO05D010181 8.3e-73 278.1 296 50.7
ATR0605G334 Amborella trichopoda HOM05D008006 ORTHO05D010181 1.4e-72 277.3 294 49.3
AUR62016258 Chenopodium quinoa HOM05D008006 ORTHO05D010181 3.2e-72 276.2 268 54.9
SalBow5G3372 Salvia bowleyana HOM05D008006 ORTHO05D010181 5.0e-70 268.9 291 51.2
Gohir.D06G096200 Gossypium hirsutum HOM05D008006 ORTHO05D010181 1.1e-69 267.7 220 58.6
SEGI_07410 Sequoiadendron giganteum HOM05D008006 ORTHO05D010181 3.3e-69 266.2 288 47.9
Actinidia28771 Actinidia chinensis HOM05D008006 ORTHO05D010181 7.5e-58 228.4 205 57.1
HanXRQChr15g0486431 Helianthus annuus HOM05D008006 ORTHO05D010181 1.1e-53 214.5 161 63.4
Mapoly0054s0065 Marchantia polymorpha HOM05D008006 ORTHO05D010181 1.2e-52 211.1 270 45.6
AUR62003323 Chenopodium quinoa HOM05D002832 ORTHO05D007530 6.6e-46 188.7 136 64.7
Lalb_Chr11g0072821 Lupinus albus HOM05D008006 ORTHO05D010181 3.0e-38 163.3 117 67.5
SMO364G0826 Selaginella moellendorffii HOM05D008006 ORTHO05D010181 6.9e-35 152.1 214 44.9
Solyc02g068350.1 Solanum lycopersicum HOM05D008006 ORTHO05D010181 9.3e-32 141.7 167 47.3
CBR_g4365 Chara braunii HOM05D008006 ORTHO05D010181 4.8e-28 129.4 308 31.8
AUR62043755 Chenopodium quinoa HOM05D008006 ORTHO05D010181 6.9e-27 125.6 82 72.0
Cre16.g675000 Chlamydomonas reinhardtii HOM05D008006 ORTHO05D010181 3.8e-25 119.8 292 37.0
FAN26G1902 Fragaria x ananassa HOM05D008006 ORTHO05D010181 2.5e-21 107.1 128 47.7
Hma1.2p1_2924F.1_g330380 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 2.7e-15 87.0 57 63.2
Oeu046642.1 Olea europaea HOM05D008006 ORTHO05D010181 9.3e-08 62.0 70 44.3
FAN26G1226 Fragaria x ananassa HOM05D008006 ORTHO05D010181 1.3e-06 58.2 77 44.2


User provided reference genes

Program Settings