Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG06G010690 Citrullus lanatus HOM05D000034 ORTHO05D000001 6.3e-61 237.3 121 100.0
ClCG05G015840 Citrullus lanatus HOM05D000034 ORTHO05D000037 3.1e-36 155.2 148 58.1
ClCG04G000690 Citrullus lanatus HOM05D000034 ORTHO05D000001 2.3e-26 122.5 103 59.2
ClCG10G007770 Citrullus lanatus HOM05D000034 ORTHO05D000001 5.0e-26 121.3 97 61.9
ClCG02G013860 Citrullus lanatus HOM05D000034 ORTHO05D000001 1.4e-23 113.2 83 68.7
Atru.chr2.1090 Acer truncatum HOM05D000034 ORTHO05D000001 6.8e-23 110.9 92 55.4
Atru.chr13.248 Acer truncatum HOM05D000002 ORTHO05D000001 4.4e-22 108.2 93 53.8
Atru.chr2.3010 Acer truncatum HOM05D000002 ORTHO05D000001 4.4e-22 108.2 93 53.8
ClCG08G004390 Citrullus lanatus HOM05D000034 ORTHO05D000001 5.8e-22 107.8 81 64.2
ClCG06G009940 Citrullus lanatus HOM05D000034 ORTHO05D000001 1.4e-20 103.2 142 45.1
ClCG02G008400 Citrullus lanatus HOM05D000034 ORTHO05D000001 1.9e-20 102.8 76 65.8
ClCG04G002650 Citrullus lanatus HOM05D000034 ORTHO05D000001 7.8e-19 97.4 95 54.7
ClCG01G009600 Citrullus lanatus HOM05D000034 ORTHO05D000001 1.9e-17 92.8 92 56.5
ClCG06G010470 Citrullus lanatus HOM05D000034 ORTHO05D000001 9.5e-17 90.5 86 55.8
ClCG05G013050 Citrullus lanatus HOM05D000034 ORTHO05D000001 7.5e-14 80.9 101 48.5
GSVIVG01016108001 Vitis vinifera HOM05D000002 ORTHO05D000001 1.9e-12 76.3 86 41.9
Atru.chr3.3123 Acer truncatum HOM05D000265 ORTHO05D000161 4.6e-11 71.6 58 60.3
CANSAT25G3406 Cannabis sativa HOM05D024232 ORTHO05D000001 6.0e-11 71.2 92 41.3
SGA_v2.0_scaffold2G01302 Striga asiatica HOM05D000033 ORTHO05D001614 6.0e-11 71.2 93 40.9
Sed0003668 Sechium edule HOM05D000034 ORTHO05D000001 7.8e-11 70.9 88 42.0
CANSAT21G1279 Cannabis sativa HOM05D000002 ORTHO05D000001 6.6e-10 67.8 97 40.2
CANSAT25G2785 Cannabis sativa HOM05D000002 ORTHO05D000001 6.6e-10 67.8 101 37.6
Lalb_Chr05g0228251 Lupinus albus HOM05D008404 ORTHO05D000001 6.6e-10 67.8 72 44.4
Atru.chr5.3093 Acer truncatum HOM05D028342 ORTHO05D000001 1.9e-09 66.2 95 35.8
Lalb_Chr13g0298801 Lupinus albus HOM05D008404 ORTHO05D000001 2.5e-09 65.9 72 43.1
CANSAT25G2670 Cannabis sativa HOM05D000002 ORTHO05D000001 5.6e-09 64.7 88 38.6
CANSAT54G2325 Cannabis sativa HOM05D000002 ORTHO05D000001 5.6e-09 64.7 92 37.0
TPR.G833 Trifolium pratense HOM05D000002 ORTHO05D000001 5.6e-09 64.7 93 41.9
Lalb_Chr06g0171641 Lupinus albus HOM05D000002 ORTHO05D000001 1.2e-08 63.5 72 41.7
PSO013G0223 Papaver somniferum HOM05D000002 ORTHO05D000001 1.6e-08 63.2 108 35.2
Sed0021821 Sechium edule HOM05D000002 ORTHO05D000001 1.6e-08 63.2 76 39.5
PSO339G5847 Papaver somniferum HOM05D000002 ORTHO05D000001 2.1e-08 62.8 82 37.8
QL08p052300 Quercus lobata HOM05D000002 ORTHO05D000001 2.1e-08 62.8 95 36.8
Sed0000135 Sechium edule HOM05D000002 ORTHO05D000001 2.8e-08 62.4 82 35.4
RcHm_v2.0_Chr7g0190501 Rosa chinensis HOM05D000002 ORTHO05D000001 3.6e-08 62.0 89 40.4
SGA_v2.0_scaffold400G50849 Striga asiatica HOM05D000002 ORTHO05D000001 3.6e-08 62.0 76 38.2
Lalb_Chr05g0226751 Lupinus albus HOM05D008404 ORTHO05D000001 6.2e-08 61.2 72 38.9
PSO832G1651 Papaver somniferum HOM05D000002 ORTHO05D000001 6.2e-08 61.2 79 35.4
MD00G1084700 Malus domestica HOM05D000002 ORTHO05D000001 8.1e-08 60.8 78 38.5
Actinidia06412 Actinidia chinensis HOM05D000034 ORTHO05D000001 1.1e-07 60.5 61 52.5
CANSAT64G1606 Cannabis sativa HOM05D000002 ORTHO05D000001 1.4e-07 60.1 92 34.8
PSO170G3169 Papaver somniferum HOM05D000002 ORTHO05D000001 1.4e-07 60.1 78 38.5
PSO478G4367 Papaver somniferum HOM05D000002 ORTHO05D000001 1.4e-07 60.1 79 35.4
TPR.G36530 Trifolium pratense HOM05D007933 ORTHO05D000001 1.4e-07 60.1 96 40.6
TPR.G36567 Trifolium pratense HOM05D000002 ORTHO05D000001 1.4e-07 60.1 94 39.4
TPR.G12295 Trifolium pratense HOM05D000002 ORTHO05D000001 1.8e-07 59.7 87 32.2
Atru.chr10.264 Acer truncatum HOM05D000002 ORTHO05D000001 2.3e-07 59.3 92 28.3
CSS0025925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-07 59.3 82 41.5
Oeu040352.1 Olea europaea HOM05D001270 ORTHO05D001099 2.3e-07 59.3 81 39.5
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 2.3e-07 59.3 73 42.5
ClCG06G009010 Citrullus lanatus HOM05D000034 ORTHO05D000001 3.1e-07 58.9 96 40.6
TPR.G25216 Trifolium pratense HOM05D000319 ORTHO05D000001 3.1e-07 58.9 90 35.6
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 3.1e-07 58.9 96 37.5
Aqoxy5G02395 Aquilegia oxysepala HOM05D000002 ORTHO05D000001 4.0e-07 58.5 76 32.9
Nitab4.5_0005846g0030 Nicotiana tabacum HOM05D002833 ORTHO05D003210 4.0e-07 58.5 75 40.0
Psat3g119480 Pisum sativum HOM05D008404 ORTHO05D000001 4.0e-07 58.5 95 33.7
TPR.G32556 Trifolium pratense HOM05D000002 ORTHO05D000001 4.0e-07 58.5 90 34.4
CSS0041353 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-07 58.2 82 40.2
Nitab4.5_0004147g0060 Nicotiana tabacum HOM05D002833 ORTHO05D000001 5.2e-07 58.2 82 39.0
Sabra06G0056900 Salix brachista HOM05D000002 ORTHO05D000001 6.8e-07 57.8 94 33.0
TPR.G22156 Trifolium pratense HOM05D000002 ORTHO05D000001 6.8e-07 57.8 85 32.9
CANSAT25G2146 Cannabis sativa HOM05D008404 ORTHO05D000001 8.9e-07 57.4 79 36.7
Sabra13G0015400 Salix brachista HOM05D004841 ORTHO05D005874 8.9e-07 57.4 95 31.6
CSS0008547 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-06 57.0 82 40.2
Psat0s3478g0040 Pisum sativum HOM05D008404 ORTHO05D000001 1.2e-06 57.0 81 33.3
MELO3C013392.2 Cucumis melo HOM05D000002 ORTHO05D000001 1.5e-06 56.6 79 36.7
CsaV3_7G000640 Cucumis sativus L. HOM05D000002 ORTHO05D000001 1.5e-06 56.6 79 36.7
MD07G1259300 Malus domestica HOM05D000002 ORTHO05D000157 1.5e-06 56.6 78 38.5
Nitab4.5_0000305g0090 Nicotiana tabacum HOM05D002833 ORTHO05D000001 1.5e-06 56.6 75 38.7
PSO170G6306 Papaver somniferum HOM05D000002 ORTHO05D000001 1.5e-06 56.6 72 38.9
PSO832G0334 Papaver somniferum HOM05D000002 ORTHO05D000001 1.5e-06 56.6 85 35.3
Rhsim05G0196600 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.5e-06 56.6 77 33.8
TPR.G32053 Trifolium pratense HOM05D000002 ORTHO05D000001 1.5e-06 56.6 72 30.6
AagrBONN_evm.TU.Sc2ySwM_340.2104 Anthoceros agrestis HOM05D000002 ORTHO05D000001 2.0e-06 56.2 74 36.5
Peaxi162Scf00023g01122 Petunia axillaris HOM05D010760 ORTHO05D000001 2.0e-06 56.2 75 38.7
CSS0017698 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-06 55.8 82 39.0
CSS0041837 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-06 55.8 82 39.0
Hma1.2p1_0018F.1_g012350 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.6e-06 55.8 97 34.0
Psat6g037960 Pisum sativum HOM05D008404 ORTHO05D000001 2.6e-06 55.8 93 32.3
TPR.G529 Trifolium pratense HOM05D007933 ORTHO05D000001 2.6e-06 55.8 93 40.9
TAR650G0001 Trochodendron aralioides HOM05D000067 ORTHO05D000001 2.6e-06 55.8 92 33.7
Hma1.2p1_0948F.1_g240460 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.4e-06 55.5 74 37.8
Peaxi162Scf00202g00046 Petunia axillaris HOM05D002833 ORTHO05D003210 3.4e-06 55.5 75 38.7
CAN.G547.11 Capsicum annuum HOM05D000545 ORTHO05D014546 4.4e-06 55.1 91 31.9
CAN.G761.6 Capsicum annuum HOM05D012364 ORTHO05D014546 4.4e-06 55.1 91 31.9
MELO3C028804.2 Cucumis melo HOM05D000002 ORTHO05D000001 4.4e-06 55.1 86 32.6
Nn1g06783 Nelumbo nucifera HOM05D023713 ORTHO05D000001 4.4e-06 55.1 93 34.4
PSO832G3798 Papaver somniferum HOM05D000002 ORTHO05D000001 4.4e-06 55.1 79 34.2
Psat2g175040 Pisum sativum HOM05D008404 ORTHO05D000001 4.4e-06 55.1 77 35.1
Atru.chr8.2260 Acer truncatum HOM05D000002 ORTHO05D000001 5.8e-06 54.7 76 34.2
Hma1.2p1_0700F.1_g205820 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.8e-06 54.7 68 39.7
MD17G1115400 Malus domestica HOM05D000002 ORTHO05D000001 5.8e-06 54.7 88 35.2
Psat4g210200 Pisum sativum HOM05D018610 ORTHO05D000001 5.8e-06 54.7 86 38.4
Actinidia03788 Actinidia chinensis HOM05D000002 ORTHO05D000001 7.6e-06 54.3 142 28.9
Actinidia04430 Actinidia chinensis HOM05D000002 ORTHO05D000001 7.6e-06 54.3 92 32.6
Aa31LG1G6100 Aethionema arabicum HOM05D000002 ORTHO05D000001 7.6e-06 54.3 77 37.7
Hma1.2p1_0020F.1_g014040 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.6e-06 54.3 74 36.5
Hma1.2p1_0233F.1_g098110 Hydrangea macrophylla HOM05D014274 ORTHO05D024986 7.6e-06 54.3 68 39.7
Hma1.2p1_1307F.1_g274730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.6e-06 54.3 74 36.5
PSO384G4937 Papaver somniferum HOM05D000002 ORTHO05D000001 7.6e-06 54.3 83 33.7
PSO761G0433 Papaver somniferum HOM05D000002 ORTHO05D000001 7.6e-06 54.3 75 34.7
Peaxi162Scf00031g00297 Petunia axillaris HOM05D010760 ORTHO05D003210 7.6e-06 54.3 75 36.0
Sabra18G0040600 Salix brachista HOM05D000002 ORTHO05D010776 7.6e-06 54.3 75 33.3
MD11G1146000 Malus domestica HOM05D000002 ORTHO05D000001 9.9e-06 53.9 73 39.7
Nitab4.5_0001153g0020 Nicotiana tabacum HOM05D012364 ORTHO05D014546 9.9e-06 53.9 91 30.8
PSO017G2967 Papaver somniferum HOM05D000002 ORTHO05D000001 9.9e-06 53.9 77 36.4
Peaxi162Scf00019g00041 Petunia axillaris HOM05D002833 ORTHO05D000001 9.9e-06 53.9 75 37.3
TAR180G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 9.9e-06 53.9 79 38.0


User provided reference genes

Program Settings