Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG06G009960 Citrullus lanatus HOM05D025760 ORTHO05D009123 7.0e-54 214.2 148 100.0
MELO3C008515.2 Cucumis melo HOM05D025760 ORTHO05D009123 1.5e-40 169.9 148 73.0
CsaV3_2G011320 Cucumis sativus L. HOM05D025760 ORTHO05D009123 2.3e-36 156.0 148 72.3
Sed0012467 Sechium edule HOM05D025760 ORTHO05D009123 1.9e-22 109.8 148 54.7
TAR365G1148 Trochodendron aralioides HOM05D007553 ORTHO05D009123 8.1e-10 67.8 81 66.7
Manes.01G009500 Manihot esculenta HOM05D007553 ORTHO05D009123 4.4e-08 62.0 78 50.0
Ciclev10022861m.g Citrus clementina HOM05D007553 ORTHO05D009123 5.8e-08 61.6 85 61.2
AT2G44080 Arabidopsis thaliana HOM05D007553 ORTHO05D009123 1.3e-07 60.5 90 53.3
AL4G42960 Arabidopsis lyrata HOM05D007553 ORTHO05D009123 1.7e-07 60.1 90 53.3
Thhalv10001780m.g Eutrema salsugineum HOM05D007553 ORTHO05D009123 1.7e-07 60.1 84 53.6
Cpa.g.sc9.240 Carica papaya HOM05D007553 ORTHO05D009123 2.2e-07 59.7 92 56.5
TWI15G0237 Tripterygium wilfordii HOM05D007553 ORTHO05D009123 2.2e-07 59.7 83 62.7
Ah.07g203320 Amaranthus hybridus HOM05D007553 ORTHO05D009123 3.8e-07 58.9 78 60.3
Carub.0004s2663 Capsella rubella HOM05D007553 ORTHO05D009123 3.8e-07 58.9 86 59.3
Migut.N03014 Erythranthe guttata HOM05D007553 ORTHO05D009123 4.9e-07 58.5 75 56.0
Sp4g26160 Schrenkiella parvula HOM05D007553 ORTHO05D009123 4.9e-07 58.5 90 52.2
THA.LOC104804341 Tarenaya hassleriana HOM05D007553 ORTHO05D009123 1.9e-06 56.6 75 49.3
THA.LOC104802351 Tarenaya hassleriana HOM05D007553 ORTHO05D009123 2.4e-06 56.2 85 44.7
Potri.007G146401 Populus trichocarpa HOM05D007553 ORTHO05D009123 3.2e-06 55.8 83 63.9
QL10p064915 Quercus lobata HOM05D007553 ORTHO05D009123 4.2e-06 55.5 91 53.8
PGR042G0659 Punica granatum HOM05D007553 ORTHO05D009123 5.4e-06 55.1 85 54.1
Thecc.05G000600 Theobroma cacao HOM05D007553 ORTHO05D009123 7.1e-06 54.7 91 58.2
BcaC01g05187 Brassica carinata HOM05D007553 ORTHO05D009123 9.2e-06 54.3 95 46.3
A03p24670 Brassica napus HOM05D007553 ORTHO05D009123 9.2e-06 54.3 95 46.3


User provided reference genes

Program Settings