Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG06G009460 Citrullus lanatus HOM05D000329 ORTHO05D005330 7.2e-56 220.3 109 100.0
COL.COLO4_15480 Corchorus olitorius HOM05D000329 ORTHO05D005330 1.1e-11 73.6 57 66.7
MELO3C010156.2 Cucumis melo HOM05D000329 ORTHO05D005330 4.6e-10 68.2 36 94.4
CsaV3_1G045290 Cucumis sativus L. HOM05D000329 ORTHO05D005330 4.6e-10 68.2 36 94.4
Actinidia39997 Actinidia chinensis HOM05D000329 ORTHO05D005330 1.9e-08 62.8 36 86.1
Gohir.A08G217300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 1.9e-08 62.8 36 86.1
Gohir.D08G234300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 1.9e-08 62.8 36 86.1
Gorai.004G249100 Gossypium raimondii HOM05D000329 ORTHO05D005330 1.9e-08 62.8 36 86.1
COL.COLO4_15478 Corchorus olitorius HOM05D000329 ORTHO05D005330 2.5e-08 62.4 48 70.8
Duzib177G0982 Durio zibethinus HOM05D000329 ORTHO05D005330 2.5e-08 62.4 36 83.3
Lj2C42G9 Lonicera japonica HOM05D000329 ORTHO05D005330 3.3e-08 62.0 53 64.2
Medtr7g115710 Medicago truncatula HOM05D000329 ORTHO05D005330 3.3e-08 62.0 36 83.3
CSS0000359 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 4.3e-08 61.6 36 83.3
CSS0019027 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 4.3e-08 61.6 36 83.3
Ca_09463_v3 Cicer arietinum L. HOM05D000329 ORTHO05D005330 4.3e-08 61.6 36 83.3
Ciclev10018568m.g Citrus clementina HOM05D000329 ORTHO05D005330 4.3e-08 61.6 36 83.3
FAN14G2464 Fragaria x ananassa HOM05D000329 ORTHO05D005330 4.3e-08 61.6 36 80.6
GSVIVG01023507001 Vitis vinifera HOM05D000329 ORTHO05D005330 4.3e-08 61.6 36 83.3
Duzib106G0267 Durio zibethinus HOM05D000329 ORTHO05D005330 5.6e-08 61.2 38 78.9
CANSAT54G2567 Cannabis sativa HOM05D000329 ORTHO05D005330 7.3e-08 60.8 36 80.6
Ah.06g191840 Amaranthus hybridus HOM05D000329 ORTHO05D005330 9.5e-08 60.5 36 80.6
Glyma.03G251100 Glycine max HOM05D000329 ORTHO05D005330 9.5e-08 60.5 48 68.8
CiPaw.08G118500 Carya illinoinensis HOM05D000329 ORTHO05D005330 1.2e-07 60.1 36 83.3
Psat3g006480 Pisum sativum HOM05D000329 ORTHO05D005330 1.2e-07 60.1 36 80.6
Potri.019G019100 Populus trichocarpa HOM05D000329 ORTHO05D005330 1.2e-07 60.1 36 83.3
vmacro19990 Vaccinium macrocarpon HOM05D000329 ORTHO05D005330 1.2e-07 60.1 36 80.6
EL10Ac4g09016 Beta vulgaris HOM05D000329 ORTHO05D005330 1.6e-07 59.7 39 74.4
MD04G1230100 Malus domestica HOM05D000329 ORTHO05D005330 1.6e-07 59.7 36 77.8
Phvul.006G105600 Phaseolus vulgaris HOM05D000329 ORTHO05D005330 1.6e-07 59.7 36 75.0
Prupe.7G018700 Prunus persica HOM05D000329 ORTHO05D005330 1.6e-07 59.7 36 77.8
RcHm_v2.0_Chr3g0449631 Rosa chinensis HOM05D000329 ORTHO05D005330 1.6e-07 59.7 36 77.8
Sabra19G0031800 Salix brachista HOM05D000329 ORTHO05D005330 1.6e-07 59.7 36 83.3
TPR.G6911 Trifolium pratense HOM05D000329 ORTHO05D005330 1.6e-07 59.7 36 77.8
FvH4_6g01900 Fragaria vesca HOM05D000329 ORTHO05D005330 2.8e-07 58.9 36 77.8
FAN05G0322 Fragaria x ananassa HOM05D000329 ORTHO05D005330 2.8e-07 58.9 36 77.8
FAN05G4177 Fragaria x ananassa HOM05D000329 ORTHO05D005330 2.8e-07 58.9 36 77.8
FAN09G2051 Fragaria x ananassa HOM05D000329 ORTHO05D005330 2.8e-07 58.9 36 77.8
FAN14G5238 Fragaria x ananassa HOM05D000329 ORTHO05D005330 2.8e-07 58.9 36 77.8
Sc09g0004230 Simmondsia chinensis HOM05D000329 ORTHO05D005330 2.8e-07 58.9 36 77.8
arahy.Tifrunner.gnm1.ann1.LXR25M Arachis hypogaea HOM05D000329 ORTHO05D005330 3.6e-07 58.5 48 66.7
Manes.09G147900 Manihot esculenta HOM05D000329 ORTHO05D005330 3.6e-07 58.5 36 83.3
TAR636G0200 Trochodendron aralioides HOM05D000329 ORTHO05D005330 3.6e-07 58.5 36 80.6
AUR62040926 Chenopodium quinoa HOM05D000329 ORTHO05D005330 4.7e-07 58.2 57 57.9
Haze_04429 Corylus avellana HOM05D000329 ORTHO05D005330 4.7e-07 58.2 36 80.6
Dinv06015 Davidia involucrata HOM05D000329 ORTHO05D005330 4.7e-07 58.2 36 83.3
Nn1g02807 Nelumbo nucifera HOM05D000329 ORTHO05D005330 4.7e-07 58.2 48 64.6
Lj1g0020261 Lotus japonicus HOM05D000329 ORTHO05D005330 6.2e-07 57.8 31 87.1
AUR62004837 Chenopodium quinoa HOM05D000329 ORTHO05D005330 8.0e-07 57.4 52 59.6
Thecc.05G271000 Theobroma cacao HOM05D000329 ORTHO05D005330 8.0e-07 57.4 36 80.6
Cfa006349 Carpinus fangiana HOM05D000329 ORTHO05D005330 1.4e-06 56.6 36 77.8
Cc02_g08850 Coffea canephora HOM05D000329 ORTHO05D005330 1.8e-06 56.2 32 81.2
Atru.chr2.977 Acer truncatum HOM05D000329 ORTHO05D005330 2.3e-06 55.8 35 80.0
Os10g0477000 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D005330 2.3e-06 55.8 36 77.8
PGR004G1157 Punica granatum HOM05D000329 ORTHO05D005330 3.1e-06 55.5 32 75.0
HanXRQChr13g0397671 Helianthus annuus HOM05D000329 ORTHO05D005330 5.2e-06 54.7 36 75.0
Lsat_1_v5_gn_2_16061 Lactuca sativa HOM05D000329 ORTHO05D005330 5.2e-06 54.7 41 68.3
Atru.chr2.952 Acer truncatum HOM05D000329 ORTHO05D005330 8.9e-06 53.9 35 77.1
TWI56G0006 Tripterygium wilfordii HOM05D000329 ORTHO05D005330 8.9e-06 53.9 35 74.3


User provided reference genes

Program Settings