Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG06G009450 Citrullus lanatus HOM05D000329 ORTHO05D005330 1.7e-61 239.2 121 100.0
MELO3C010156.2 Cucumis melo HOM05D000329 ORTHO05D005330 7.0e-44 180.6 96 95.8
Cpa.g.sc162.42 Carica papaya HOM05D000329 ORTHO05D028196 8.6e-34 147.1 101 78.2
GSVIVG01023507001 Vitis vinifera HOM05D000329 ORTHO05D005330 7.3e-33 144.1 96 79.2
Actinidia39997 Actinidia chinensis HOM05D000329 ORTHO05D005330 1.2e-32 143.3 95 78.9
Manes.09G147900 Manihot esculenta HOM05D000329 ORTHO05D005330 4.7e-32 141.4 92 78.3
Atru.chr2.977 Acer truncatum HOM05D000329 ORTHO05D005330 8.0e-32 140.6 116 65.5
Cfa006349 Carpinus fangiana HOM05D000329 ORTHO05D005330 8.0e-32 140.6 119 67.2
Nn1g02807 Nelumbo nucifera HOM05D000329 ORTHO05D005330 1.0e-31 140.2 87 80.5
QL03p030482 Quercus lobata HOM05D000329 ORTHO05D005330 1.0e-31 140.2 119 65.5
MSTRG.316 Avicennia marina HOM05D000329 ORTHO05D005330 1.4e-31 139.8 95 74.7
CSS0000359 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 1.4e-31 139.8 95 76.8
Cc02_g08850 Coffea canephora HOM05D000329 ORTHO05D005330 1.4e-31 139.8 95 74.7
Atru.chr2.952 Acer truncatum HOM05D000329 ORTHO05D005330 3.0e-31 138.7 99 72.7
RcHm_v2.0_Chr3g0449631 Rosa chinensis HOM05D000329 ORTHO05D005330 5.2e-31 137.9 96 74.0
TAR636G0200 Trochodendron aralioides HOM05D000329 ORTHO05D005330 5.2e-31 137.9 96 75.0
FvH4_6g01900 Fragaria vesca HOM05D000329 ORTHO05D005330 6.8e-31 137.5 96 72.9
FAN14G2464 Fragaria x ananassa HOM05D000329 ORTHO05D005330 6.8e-31 137.5 96 72.9
FAN14G5238 Fragaria x ananassa HOM05D000329 ORTHO05D005330 6.8e-31 137.5 96 72.9
CSS0019027 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 8.9e-31 137.1 89 78.7
FAN09G2051 Fragaria x ananassa HOM05D000329 ORTHO05D005330 8.9e-31 137.1 96 72.9
PGR004G1157 Punica granatum HOM05D000329 ORTHO05D005330 8.9e-31 137.1 96 74.0
Duzib177G0982 Durio zibethinus HOM05D000329 ORTHO05D005330 1.2e-30 136.7 96 74.0
Ciclev10018568m.g Citrus clementina HOM05D000329 ORTHO05D005330 1.5e-30 136.3 105 67.6
COL.COLO4_15478 Corchorus olitorius HOM05D000329 ORTHO05D005330 1.5e-30 136.3 100 71.0
Thecc.05G271000 Theobroma cacao HOM05D000329 ORTHO05D005330 1.5e-30 136.3 98 72.4
Prupe.7G018700 Prunus persica HOM05D000329 ORTHO05D005330 2.0e-30 136.0 96 70.8
arahy.Tifrunner.gnm1.ann1.LXR25M Arachis hypogaea HOM05D000329 ORTHO05D005330 3.4e-30 135.2 89 77.5
FAN05G0322 Fragaria x ananassa HOM05D000329 ORTHO05D005330 3.4e-30 135.2 96 71.9
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 3.4e-30 135.2 92 73.9
CiPaw.08G118500 Carya illinoinensis HOM05D000329 ORTHO05D005330 4.4e-30 134.8 88 78.4
Gohir.A08G217300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 4.4e-30 134.8 96 72.9
Gohir.D08G234300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 4.4e-30 134.8 96 72.9
Gorai.004G249100 Gossypium raimondii HOM05D000329 ORTHO05D005330 4.4e-30 134.8 96 72.9
DCAR_000979 Daucus carota HOM05D000329 ORTHO05D005330 7.5e-30 134.0 86 80.2
Lj2C42G9 Lonicera japonica HOM05D000329 ORTHO05D005330 9.8e-30 133.7 96 70.8
Potri.019G019100 Populus trichocarpa HOM05D000329 ORTHO05D005330 1.3e-29 133.3 92 75.0
CANSAT54G2567 Cannabis sativa HOM05D000329 ORTHO05D005330 2.9e-29 132.1 96 70.8
Oeu014525.1 Olea europaea HOM05D000329 ORTHO05D005330 2.9e-29 132.1 84 78.6
AUR62040926 Chenopodium quinoa HOM05D000329 ORTHO05D005330 6.4e-29 131.0 102 67.6
AUR62004837 Chenopodium quinoa HOM05D000329 ORTHO05D005330 1.1e-28 130.2 102 67.6
Phvul.006G105600 Phaseolus vulgaris HOM05D000329 ORTHO05D005330 1.4e-28 129.8 96 72.9
ECA238G1533 Erigeron canadensis HOM05D000329 ORTHO05D005330 1.8e-28 129.4 82 79.3
Thhalv10019943m.g Eutrema salsugineum HOM05D000329 ORTHO05D005330 1.8e-28 129.4 116 63.8
Lsat_1_v5_gn_2_16061 Lactuca sativa HOM05D000329 ORTHO05D005330 1.8e-28 129.4 84 76.2
TWI56G0006 Tripterygium wilfordii HOM05D000329 ORTHO05D005330 3.2e-28 128.6 89 75.3
AT3G04490 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 5.4e-28 127.9 109 66.1
MD04G1230100 Malus domestica HOM05D000329 ORTHO05D005330 5.4e-28 127.9 97 68.0
PSO017G0764 Papaver somniferum HOM05D000329 ORTHO05D005330 1.6e-27 126.3 84 75.0
PSO063G2047 Papaver somniferum HOM05D000329 ORTHO05D005330 1.6e-27 126.3 84 75.0
Sabra19G0031800 Salix brachista HOM05D000329 ORTHO05D005330 1.6e-27 126.3 106 66.0
CsaV3_1G045290 Cucumis sativus L. HOM05D000329 ORTHO05D005330 2.0e-27 125.9 65 96.9
Duzib106G0267 Durio zibethinus HOM05D000329 ORTHO05D005330 2.0e-27 125.9 96 67.7
Migut.F01542 Erythranthe guttata HOM05D000329 ORTHO05D005330 2.0e-27 125.9 89 68.5
THA.LOC104827286 Tarenaya hassleriana HOM05D000329 ORTHO05D005330 2.0e-27 125.9 116 59.5
Aa31LG5G14930 Aethionema arabicum HOM05D000329 ORTHO05D005330 2.7e-27 125.6 109 65.1
Glyma.03G251100 Glycine max HOM05D000329 ORTHO05D005330 2.7e-27 125.6 96 70.8
TPR.G6911 Trifolium pratense HOM05D000329 ORTHO05D005330 2.7e-27 125.6 96 72.9
Sp3g03340 Schrenkiella parvula HOM05D000329 ORTHO05D005330 3.5e-27 125.2 111 64.0
BcaC05g30221 Brassica carinata HOM05D000329 ORTHO05D005330 4.6e-27 124.8 108 63.0
BcaC05g29938 Brassica carinata HOM05D000329 ORTHO05D005330 1.0e-26 123.6 108 62.0
A05p42990 Brassica napus HOM05D000329 ORTHO05D005330 1.0e-26 123.6 108 62.0
C05p62760 Brassica napus HOM05D000329 ORTHO05D005330 1.0e-26 123.6 108 62.0
BolC5t34929H Brassica oleracea HOM05D000329 ORTHO05D005330 1.0e-26 123.6 108 62.0
BraA05t23043Z Brassica rapa HOM05D000329 ORTHO05D005330 1.0e-26 123.6 108 62.0
HanXRQChr13g0397671 Helianthus annuus HOM05D000329 ORTHO05D005330 1.0e-26 123.6 77 79.2
Carub.0003s0365 Capsella rubella HOM05D000329 ORTHO05D005330 1.7e-26 122.9 101 67.3
Sc09g0004230 Simmondsia chinensis HOM05D000329 ORTHO05D005330 1.7e-26 122.9 96 67.7
Aqoxy2G03671 Aquilegia oxysepala HOM05D000329 ORTHO05D005330 3.0e-26 122.1 87 71.3
Ca_09463_v3 Cicer arietinum L. HOM05D000329 ORTHO05D005330 5.0e-26 121.3 96 69.8
Peaxi162Scf00304g10137 Petunia axillaris HOM05D000329 ORTHO05D005330 6.6e-26 120.9 78 76.9
SGA_v2.0_scaffold50G18503 Striga asiatica HOM05D000329 ORTHO05D005330 6.6e-26 120.9 102 65.7
BcaC05g30194 Brassica carinata HOM05D000329 ORTHO05D005330 8.6e-26 120.6 84 72.6
ATR0736G139 Amborella trichopoda HOM05D000329 ORTHO05D005330 4.3e-25 118.2 102 56.9
Psat3g006480 Pisum sativum HOM05D000329 ORTHO05D005330 9.5e-25 117.1 96 65.6
AL3G14470 Arabidopsis lyrata HOM05D000329 ORTHO05D005330 2.8e-24 115.5 85 72.9
Medtr7g115710 Medicago truncatula HOM05D000329 ORTHO05D005330 2.8e-24 115.5 96 66.7
FAN05G4177 Fragaria x ananassa HOM05D000329 ORTHO05D005330 4.7e-24 114.8 144 48.6
Ah.06g191840 Amaranthus hybridus HOM05D000329 ORTHO05D005330 8.0e-24 114.0 96 62.5
Sed0009230 Sechium edule HOM05D000329 ORTHO05D028196 1.0e-23 113.6 59 94.9
Lj1g0020261 Lotus japonicus HOM05D000329 ORTHO05D005330 1.4e-23 113.2 99 64.6
vmacro19990 Vaccinium macrocarpon HOM05D000329 ORTHO05D005330 2.3e-23 112.5 147 47.6
Zm00001eb045870 Zea mays HOM05D000329 ORTHO05D005330 8.9e-23 110.5 96 64.6
CDE08G1167 Ceratophyllum demersum HOM05D000329 ORTHO05D005330 1.5e-22 109.8 96 60.4
Os10g0477000 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D005330 5.8e-22 107.8 96 61.5
Lalb_Chr18g0044041 Lupinus albus HOM05D000329 ORTHO05D005330 8.3e-21 104.0 103 52.4
AT4G38092 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 5.4e-20 101.3 86 62.8
Mapoly0091s0014 Marchantia polymorpha HOM05D000329 ORTHO05D005330 1.1e-17 93.6 84 53.6
EL10Ac4g09016 Beta vulgaris HOM05D000329 ORTHO05D005330 5.6e-17 91.3 93 55.9
SMO356G0150 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 2.1e-16 89.4 110 45.5
unitig_46.g18343 Utricularia gibba HOM05D000329 ORTHO05D005330 2.1e-16 89.4 66 68.2
Pp3c6_27570 Physcomitrium patens HOM05D000329 ORTHO05D005330 1.8e-15 86.3 90 50.0
AagrBONN_evm.TU.Sc2ySwM_228.3774 Anthoceros agrestis HOM05D000329 ORTHO05D005330 2.3e-15 85.9 102 45.1
COL.COLO4_15480 Corchorus olitorius HOM05D000329 ORTHO05D005330 5.2e-15 84.7 100 51.0
SMO002G0004 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 2.2e-13 79.3 85 49.4
Nitab4.5_0003285g0080 Nicotiana tabacum HOM05D000329 ORTHO05D005330 2.9e-13 79.0 94 52.1
CBR_g8586 Chara braunii HOM05D000329 ORTHO05D005330 3.2e-12 75.5 80 47.5
Cre09.g404350 Chlamydomonas reinhardtii HOM05D000329 ORTHO05D005330 4.7e-08 61.6 87 37.9
BraA01t03057Z Brassica rapa HOM05D000329 ORTHO05D028196 6.2e-08 61.2 51 64.7
A06p19390 Brassica napus HOM05D000329 ORTHO05D028196 1.4e-07 60.1 51 62.7
Haze_04429 Corylus avellana HOM05D000329 ORTHO05D005330 1.4e-07 60.1 35 85.7
Dinv06015 Davidia involucrata HOM05D000329 ORTHO05D005330 2.0e-06 56.2 32 84.4
Nitab4.5_0000432g0080 Nicotiana tabacum HOM05D000329 ORTHO05D005330 2.6e-06 55.8 41 68.3


User provided reference genes

Program Settings