Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 1.9e-81 305.8 157 100.0
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 1.3e-79 299.7 162 96.9
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 3.0e-79 298.5 162 96.3
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 7.4e-78 293.9 162 94.4
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 4.8e-77 291.2 162 93.2
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 8.1e-77 290.4 162 92.6
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 1.4e-76 289.7 162 92.6
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.4e-76 289.7 157 93.6
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 1.4e-76 289.7 162 92.6
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 3.1e-76 288.5 161 92.5
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 4.0e-76 288.1 162 92.0
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 4.0e-76 288.1 162 92.0
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 5.3e-76 287.7 162 92.0
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 6.9e-76 287.3 160 92.5
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 9.0e-76 287.0 162 90.7
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 9.0e-76 287.0 161 93.2
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 9.0e-76 287.0 162 90.7
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 1.2e-75 286.6 162 91.4
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 1.2e-75 286.6 162 91.4
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 1.2e-75 286.6 162 92.0
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 1.2e-75 286.6 162 91.4
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 1.5e-75 286.2 161 91.3
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 1.5e-75 286.2 162 91.4
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 2.0e-75 285.8 162 90.7
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 2.0e-75 285.8 162 90.7
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 2.0e-75 285.8 162 90.7
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 2.0e-75 285.8 162 90.7
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 2.6e-75 285.4 162 90.7
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 3.4e-75 285.0 162 92.0
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 3.4e-75 285.0 162 90.7
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 3.4e-75 285.0 162 90.7
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 3.4e-75 285.0 162 90.7
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 3.4e-75 285.0 162 90.1
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 4.5e-75 284.6 162 90.7
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 4.5e-75 284.6 162 90.1
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 4.5e-75 284.6 162 90.7
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 4.5e-75 284.6 162 90.1
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 7.6e-75 283.9 162 90.1
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 7.6e-75 283.9 162 89.5
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 9.9e-75 283.5 162 90.7
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 9.9e-75 283.5 162 89.5
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 1.7e-74 282.7 162 90.1
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 1.7e-74 282.7 162 89.5
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 2.2e-74 282.3 162 90.1
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 3.8e-74 281.6 162 90.1
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 3.8e-74 281.6 158 90.5
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 3.8e-74 281.6 161 90.1
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 4.9e-74 281.2 168 87.5
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 4.9e-74 281.2 162 89.5
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 4.9e-74 281.2 162 89.5
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 8.4e-74 280.4 162 88.3
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 1.4e-73 279.6 162 88.9
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 1.4e-73 279.6 162 88.9
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 2.4e-73 278.9 161 87.6
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 4.2e-73 278.1 162 87.7
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 5.5e-73 277.7 162 88.3
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 5.5e-73 277.7 162 88.3
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 5.5e-73 277.7 175 83.4
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 5.5e-73 277.7 162 88.3
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 7.1e-73 277.3 162 88.3
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 1.2e-72 276.6 160 89.4
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 1.6e-72 276.2 162 87.7
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 2.1e-72 275.8 175 82.9
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 2.7e-72 275.4 162 87.0
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 3.5e-72 275.0 157 90.4
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 7.9e-72 273.9 158 88.6
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 1.0e-71 273.5 160 88.1
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 1.0e-71 273.5 157 88.5
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 1.0e-71 273.5 161 87.6
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 1.3e-71 273.1 159 87.4
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 1.8e-71 272.7 162 87.7
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 3.9e-71 271.6 182 80.8
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 6.7e-71 270.8 162 85.2
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 1.9e-70 269.2 150 92.7
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 1.9e-70 269.2 181 79.6
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 2.1e-69 265.8 162 84.6
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 6.2e-69 264.2 143 95.8
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 1.8e-68 262.7 161 83.9
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 7.6e-67 257.3 167 82.6
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 1.3e-66 256.5 158 82.9
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 1.7e-66 256.1 134 95.5
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 2.2e-66 255.8 135 94.1
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 1.9e-65 252.7 139 94.2
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 4.2e-65 251.5 143 88.8
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 1.6e-64 249.6 134 93.3
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 1.6e-64 249.6 135 91.9
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 2.7e-64 248.8 139 92.1
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 1.3e-63 246.5 134 91.8
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 5.7e-62 241.1 139 89.2
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 4.1e-60 235.0 160 73.8
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 3.4e-59 231.9 157 80.3
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 2.9e-58 228.8 162 77.2
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 8.5e-58 227.3 128 90.6
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 1.9e-57 226.1 157 77.7
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 2.5e-57 225.7 254 55.1
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 1.6e-56 223.0 156 76.3
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 2.7e-56 222.2 156 76.9
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 1.8e-52 209.5 122 89.3
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 2.6e-51 205.7 109 95.4
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 4.2e-49 198.4 110 90.9
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 1.6e-48 196.4 225 55.6
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 7.9e-48 194.1 117 86.3
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.0e-47 193.7 112 90.2
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.0e-47 193.7 112 90.2
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 6.7e-47 191.0 121 81.8
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 6.9e-44 181.0 177 62.1
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 4.5e-43 178.3 162 56.8
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 1.4e-36 156.8 172 50.0
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 4.5e-35 151.8 157 56.7
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 7.7e-35 151.0 108 75.9
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 2.5e-33 146.0 76 96.1
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 3.3e-30 135.6 112 65.2
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 1.2e-24 117.1 67 89.6
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 1.4e-23 113.6 67 86.6
Cpa.g.c27575.2 Carica papaya HOM05D006777 ORTHO05D008360 6.8e-23 111.3 57 93.0
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 1.2e-22 110.5 78 75.6
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 1.0e-18 97.4 67 74.6
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 1.9e-17 93.2 50 90.0
CSS0011736 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 3.1e-12 75.9 38 89.5
CSS0009674 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 8.6e-10 67.8 39 82.1


User provided reference genes

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