Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG06G005730 Citrullus lanatus HOM05D000545 ORTHO05D000539 2.5e-68 261.9 128 100.0
ClCG09G004120 Citrullus lanatus HOM05D000545 ORTHO05D000539 2.9e-64 248.4 152 84.2
MELO3C023554.2 Cucumis melo HOM05D000545 ORTHO05D000539 3.2e-63 245.0 128 92.2
CsaV3_7G031020 Cucumis sativus L. HOM05D000545 ORTHO05D000539 2.1e-62 242.3 128 91.4
Sed0001584 Sechium edule HOM05D000545 ORTHO05D000539 7.1e-55 217.2 128 84.4
Gohir.A08G144100 Gossypium hirsutum HOM05D000545 ORTHO05D000539 2.9e-32 142.1 133 56.4
Cpa.g.sc125.6 Carica papaya HOM05D000545 ORTHO05D000539 1.9e-31 139.4 134 53.7
Gorai.004G172100 Gossypium raimondii HOM05D000545 ORTHO05D000539 1.2e-30 136.7 133 55.6
Duzib138G1104 Durio zibethinus HOM05D000545 ORTHO05D000539 1.6e-30 136.3 133 54.9
Gohir.D08G165100 Gossypium hirsutum HOM05D000545 ORTHO05D000539 7.9e-30 134.0 133 54.9
Haze_03201 Corylus avellana HOM05D000545 ORTHO05D000539 1.0e-29 133.7 149 49.7
Cfa010770 Carpinus fangiana HOM05D000545 ORTHO05D000539 2.0e-28 129.4 149 48.3
CiPaw.14G000300 Carya illinoinensis HOM05D000545 ORTHO05D000539 3.7e-27 125.2 148 47.3
Thecc.01G410300 Theobroma cacao HOM05D000545 ORTHO05D000539 1.1e-26 123.6 134 49.3
QL04p006303 Quercus lobata HOM05D000545 ORTHO05D000539 5.9e-25 117.9 149 45.6
Sabra16G0163200 Salix brachista HOM05D000545 ORTHO05D000539 1.7e-24 116.3 149 43.6
Prupe.2G014500 Prunus persica HOM05D000545 ORTHO05D000539 2.9e-24 115.5 149 42.3
FAN10G3954 Fragaria x ananassa HOM05D000545 ORTHO05D000539 1.9e-23 112.8 142 45.8
Manes.10G141400 Manihot esculenta HOM05D000545 ORTHO05D000539 1.9e-23 112.8 148 45.9
Atru.chr11.2622 Acer truncatum HOM05D000545 ORTHO05D000539 2.5e-23 112.5 127 51.2
FAN03G3292 Fragaria x ananassa HOM05D000545 ORTHO05D000539 3.2e-23 112.1 142 45.8
GSVIVG01032101001 Vitis vinifera HOM05D000545 ORTHO05D000539 7.2e-23 110.9 153 41.8
FvH4_7g01120 Fragaria vesca HOM05D000545 ORTHO05D000539 1.6e-22 109.8 142 44.4
FAN06G4835 Fragaria x ananassa HOM05D000545 ORTHO05D000539 2.1e-22 109.4 142 44.4
Gorai.004G066000 Gossypium raimondii HOM05D000545 ORTHO05D000539 2.1e-22 109.4 127 48.0
Dinv43440 Davidia involucrata HOM05D000545 ORTHO05D000539 2.7e-22 109.0 145 42.8
Potri.009G060600 Populus trichocarpa HOM05D000545 ORTHO05D000539 2.7e-22 109.0 148 39.9
FAN01G0595 Fragaria x ananassa HOM05D000545 ORTHO05D000539 3.6e-22 108.6 142 45.1
Potri.001G266000 Populus trichocarpa HOM05D000545 ORTHO05D000539 6.1e-22 107.8 149 40.9
Dinv09351 Davidia involucrata HOM05D000545 ORTHO05D000539 1.4e-21 106.7 145 42.1
Ciclev10032207m.g Citrus clementina HOM05D000545 ORTHO05D000539 2.0e-20 102.8 128 46.9
Actinidia19398 Actinidia chinensis HOM05D000545 ORTHO05D000539 5.7e-20 101.3 145 39.3
RcHm_v2.0_Chr1g0316121 Rosa chinensis HOM05D000545 ORTHO05D000539 5.7e-20 101.3 145 44.1
COL.COLO4_04857 Corchorus olitorius HOM05D000545 ORTHO05D000539 9.7e-20 100.5 167 39.5
Manes.07G006600 Manihot esculenta HOM05D000545 ORTHO05D000539 9.7e-20 100.5 149 40.3
Glyma.12G236800 Glycine max HOM05D000545 ORTHO05D000539 1.3e-19 100.1 132 43.9
vmacro13670 Vaccinium macrocarpon HOM05D000545 ORTHO05D000539 1.7e-19 99.8 146 40.4
Hma1.2p1_0184F.1_g081170 Hydrangea macrophylla HOM05D000545 ORTHO05D000539 2.2e-19 99.4 147 38.8
Rhsim07G0056100 Rhododendron simsii HOM05D000545 ORTHO05D000539 2.2e-19 99.4 145 40.0
Gohir.A08G054200 Gossypium hirsutum HOM05D000545 ORTHO05D000539 4.8e-19 98.2 135 44.4
THA.LOC104826680 Tarenaya hassleriana HOM05D000545 ORTHO05D000539 1.8e-18 96.3 126 38.1
Glyma.13G202300 Glycine max HOM05D000545 ORTHO05D000539 2.6e-17 92.4 132 43.2
Lalb_Chr03g0034101 Lupinus albus HOM05D000545 ORTHO05D000539 3.5e-17 92.0 150 38.0
TAR633G2356 Trochodendron aralioides HOM05D000545 ORTHO05D000539 3.5e-17 92.0 155 37.4
Duzib133G0283 Durio zibethinus HOM05D000545 ORTHO05D000539 5.9e-17 91.3 122 44.3
CSS0020271 Camellia sinensis var. sinensis HOM05D000545 ORTHO05D000539 1.0e-16 90.5 145 39.3
TWI73G0751 Tripterygium wilfordii HOM05D000545 ORTHO05D000539 1.3e-16 90.1 128 43.8
CANSAT80G1700 Cannabis sativa HOM05D000545 ORTHO05D000539 5.5e-15 84.7 145 36.6
Sc11g0009150 Simmondsia chinensis HOM05D000545 ORTHO05D000539 7.2e-15 84.3 152 32.9
TAR369G0774 Trochodendron aralioides HOM05D000545 ORTHO05D000539 2.7e-14 82.4 155 33.5
Sc10g0000100 Simmondsia chinensis HOM05D000545 ORTHO05D000539 8.0e-14 80.9 149 34.9
MD07G1011300 Malus domestica HOM05D000545 ORTHO05D000539 1.0e-13 80.5 68 54.4
TAR623G1120 Trochodendron aralioides HOM05D000545 ORTHO05D000539 1.8e-13 79.7 155 32.9
MD02G1309800 Malus domestica HOM05D000545 ORTHO05D000539 4.0e-13 78.6 68 52.9
Ca_23891_v3 Cicer arietinum L. HOM05D000545 ORTHO05D000539 1.5e-12 76.6 152 37.5
Lj7A571T38 Lonicera japonica HOM05D000545 ORTHO05D000539 2.0e-12 76.3 182 31.9
Medtr8g037270 Medicago truncatula HOM05D000545 ORTHO05D000539 7.5e-12 74.3 141 35.5
Psat4g148880 Pisum sativum HOM05D000545 ORTHO05D000539 8.3e-11 70.9 132 36.4
VMungo1127G1682 Vigna mungo HOM05D000545 ORTHO05D000539 1.4e-10 70.1 100 41.0
Phvul.011G211300 Phaseolus vulgaris HOM05D000545 ORTHO05D000539 1.8e-10 69.7 107 43.9
Prupe.4G249900 Prunus persica HOM05D000545 ORTHO05D000539 1.8e-10 69.7 153 34.0
GSVIVG01033313001 Vitis vinifera HOM05D000545 ORTHO05D000539 7.0e-10 67.8 131 34.4
Nitab4.5_0005476g0020 Nicotiana tabacum HOM05D000545 ORTHO05D000539 9.1e-10 67.4 121 37.2
Atru.chr1.1054 Acer truncatum HOM05D000545 ORTHO05D000539 1.2e-09 67.0 130 31.5
Cc02_g28060 Coffea canephora HOM05D000545 ORTHO05D000539 1.2e-09 67.0 119 36.1
CsaV3_1G042800 Cucumis sativus L. HOM05D000545 ORTHO05D000539 1.2e-09 67.0 153 32.7
MELO3C015196.2 Cucumis melo HOM05D000545 ORTHO05D000539 1.6e-09 66.6 153 32.7
PSO339G1099 Papaver somniferum HOM05D000545 ORTHO05D000539 2.0e-09 66.2 154 31.2
arahy.Tifrunner.gnm1.ann1.3C4V56 Arachis hypogaea HOM05D000545 ORTHO05D000539 2.7e-09 65.9 156 32.7
Nn7g36222 Nelumbo nucifera HOM05D000545 ORTHO05D000539 2.7e-09 65.9 159 32.1
SalBow6G1565 Salvia bowleyana HOM05D000545 ORTHO05D000539 2.7e-09 65.9 151 28.5
SalBow6G4778 Salvia bowleyana HOM05D000545 ORTHO05D000539 2.7e-09 65.9 151 28.5
PSO384G2356 Papaver somniferum HOM05D000545 ORTHO05D000539 3.5e-09 65.5 154 31.2
ClCG02G023180 Citrullus lanatus HOM05D000545 ORTHO05D000539 4.5e-09 65.1 147 32.7
arahy.Tifrunner.gnm1.ann1.TY3GKM Arachis hypogaea HOM05D000545 ORTHO05D000539 7.7e-09 64.3 156 32.1
Phvul.006G062200 Phaseolus vulgaris HOM05D000545 ORTHO05D000539 7.7e-09 64.3 153 32.7
Glyma.18G071000 Glycine max HOM05D000545 ORTHO05D000539 1.0e-08 63.9 153 32.7
VMungo0540G2022 Vigna mungo HOM05D000545 ORTHO05D000539 1.0e-08 63.9 153 32.7
MELO3C014590.2 Cucumis melo HOM05D000545 ORTHO05D000539 1.7e-08 63.2 155 31.6
Sed0015811 Sechium edule HOM05D000545 ORTHO05D000539 1.7e-08 63.2 153 34.0
Haze_19897 Corylus avellana HOM05D000545 ORTHO05D000539 2.2e-08 62.8 134 33.6
Oeu006565.1 Olea europaea HOM05D000545 ORTHO05D000539 2.9e-08 62.4 127 35.4
Solyc01g087240.3 Solanum lycopersicum HOM05D000545 ORTHO05D000539 2.9e-08 62.4 107 37.4
Nitab4.5_0007165g0020 Nicotiana tabacum HOM05D000545 ORTHO05D000539 3.8e-08 62.0 103 39.8
Sabra09G0044700 Salix brachista HOM05D000545 ORTHO05D000539 3.8e-08 62.0 156 30.8
MSTRG.28064 Avicennia marina HOM05D000545 ORTHO05D000539 5.0e-08 61.6 137 32.8
Cfa016844 Carpinus fangiana HOM05D000545 ORTHO05D000539 1.5e-07 60.1 116 29.3
Glyma.08G335900 Glycine max HOM05D000545 ORTHO05D000539 1.5e-07 60.1 153 32.7
Sopen01g034290 Solanum pennellii HOM05D000545 ORTHO05D000539 1.5e-07 60.1 102 37.3
PGSC0003DMG400006863 Solanum tuberosum HOM05D000545 ORTHO05D000539 1.5e-07 60.1 108 37.0
Ca_14875_v3 Cicer arietinum L. HOM05D000545 ORTHO05D000539 1.9e-07 59.7 150 32.0
HanXRQChr17g0562971 Helianthus annuus HOM05D000545 ORTHO05D000539 1.9e-07 59.7 125 27.2
Lalb_Chr18g0050461 Lupinus albus HOM05D000545 ORTHO05D000539 1.9e-07 59.7 132 31.8
Atru.chr3.2710 Acer truncatum HOM05D000545 ORTHO05D000539 2.5e-07 59.3 152 31.6
ClCG03G013220 Citrullus lanatus HOM05D000545 ORTHO05D000539 2.5e-07 59.3 153 30.7
Migut.N02320 Erythranthe guttata HOM05D000545 ORTHO05D000539 3.2e-07 58.9 147 35.4
Lj6g0002522 Lotus japonicus HOM05D000545 ORTHO05D000539 3.2e-07 58.9 152 33.6
Actinidia16336 Actinidia chinensis HOM05D000545 ORTHO05D000539 4.2e-07 58.5 147 32.0
Ciclev10015808m.g Citrus clementina HOM05D000545 ORTHO05D000539 9.4e-07 57.4 152 30.9
Peaxi162Scf00953g00217 Petunia axillaris HOM05D000545 ORTHO05D000539 1.6e-06 56.6 110 34.5
AUR62009388 Chenopodium quinoa HOM05D000545 ORTHO05D000539 2.1e-06 56.2 146 28.1
Psat5g165120 Pisum sativum HOM05D000545 ORTHO05D000539 2.1e-06 56.2 157 31.8
CSS0044548 Camellia sinensis var. sinensis HOM05D000545 ORTHO05D000539 2.7e-06 55.8 150 32.0
AUR62023070 Chenopodium quinoa HOM05D000545 ORTHO05D000539 2.7e-06 55.8 122 31.1
EL10Ac2g04334 Beta vulgaris HOM05D000545 ORTHO05D000539 3.6e-06 55.5 126 31.0
CsaV3_6G039350 Cucumis sativus L. HOM05D000545 ORTHO05D000539 3.6e-06 55.5 147 29.3
Thecc.05G159600 Theobroma cacao HOM05D000545 ORTHO05D000539 4.7e-06 55.1 132 28.8
Ciclev10005144m.g Citrus clementina HOM05D000545 ORTHO05D000539 8.0e-06 54.3 131 32.1
Manes.06G163900 Manihot esculenta HOM05D000545 ORTHO05D000539 8.0e-06 54.3 152 28.9


User provided reference genes

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