Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG06G000120 Citrullus lanatus HOM05D004717 ORTHO05D005636 4.5e-152 541.2 266 100.0
CsaV3_6G005870 Cucumis sativus L. HOM05D004717 ORTHO05D005636 1.1e-97 360.5 189 94.2
MELO3C022525.2 Cucumis melo HOM05D004717 ORTHO05D005636 2.4e-97 359.4 189 93.7
Sed0025396 Sechium edule HOM05D004717 ORTHO05D005636 9.5e-94 347.4 189 89.4
Sed0013821 Sechium edule HOM05D004717 ORTHO05D005636 3.1e-92 342.4 189 87.8
Duzib132G0983 Durio zibethinus HOM05D004717 ORTHO05D005636 2.5e-86 322.8 189 79.9
Thecc.02G155400 Theobroma cacao HOM05D004717 ORTHO05D005636 3.3e-86 322.4 189 81.0
Gohir.A12G132100 Gossypium hirsutum HOM05D004717 ORTHO05D005636 1.4e-84 317.0 189 78.8
GSVIVG01038782001 Vitis vinifera HOM05D004717 ORTHO05D005636 1.8e-84 316.6 189 79.9
Gorai.008G146900 Gossypium raimondii HOM05D004717 ORTHO05D005636 2.3e-84 316.2 189 78.8
Manes.08G039100 Manihot esculenta HOM05D004717 ORTHO05D005636 5.2e-84 315.1 189 79.9
Eucgr.G02601 Eucalyptus grandis HOM05D004717 ORTHO05D005636 8.9e-84 314.3 189 78.8
Atru.chr11.1095 Acer truncatum HOM05D004717 ORTHO05D005636 1.5e-83 313.5 189 77.8
CiPaw.06G062200 Carya illinoinensis HOM05D004717 ORTHO05D005636 2.4e-81 306.2 189 76.2
TWI74G1267 Tripterygium wilfordii HOM05D004717 ORTHO05D005636 2.7e-80 302.8 189 75.1
Dinv02673 Davidia involucrata HOM05D004717 ORTHO05D005636 4.6e-80 302.0 189 77.2
Prupe.1G348900 Prunus persica HOM05D004717 ORTHO05D005636 4.6e-80 302.0 189 74.6
Eucgr.G02666 Eucalyptus grandis HOM05D004717 ORTHO05D005636 1.7e-79 300.1 189 74.1
THA.LOC104800704 Tarenaya hassleriana HOM05D004717 ORTHO05D005636 3.0e-79 299.3 189 74.6
Lalb_Chr24g0398391 Lupinus albus HOM05D004717 ORTHO05D005636 3.9e-79 298.9 189 75.7
MD16G1003900 Malus domestica HOM05D004717 ORTHO05D005636 3.9e-79 298.9 189 74.1
PGR142G2311 Punica granatum HOM05D004717 ORTHO05D005636 6.6e-79 298.1 189 71.4
vmacro15638 Vaccinium macrocarpon HOM05D004717 ORTHO05D005636 6.6e-79 298.1 189 73.5
Gohir.D12G135700 Gossypium hirsutum HOM05D004717 ORTHO05D005636 1.1e-78 297.4 180 77.8
CSS0046676 Camellia sinensis var. sinensis HOM05D004717 ORTHO05D005636 1.5e-78 297.0 189 74.6
Lj6P708T54 Lonicera japonica HOM05D004717 ORTHO05D005636 1.9e-78 296.6 189 74.6
Lj5g0015714 Lotus japonicus HOM05D004717 ORTHO05D005636 7.3e-78 294.7 189 73.0
Haze_11783 Corylus avellana HOM05D004717 ORTHO05D005636 9.5e-78 294.3 189 73.5
MD13G1003500 Malus domestica HOM05D004717 ORTHO05D005636 9.5e-78 294.3 189 73.0
Potri.005G089500 Populus trichocarpa HOM05D004717 ORTHO05D005636 9.5e-78 294.3 189 73.0
FAN12G1282 Fragaria x ananassa HOM05D004717 ORTHO05D005636 2.1e-77 293.1 189 74.6
Nitab4.5_0004808g0010 Nicotiana tabacum HOM05D004717 ORTHO05D005636 2.1e-77 293.1 189 72.0
PGR142G4258 Punica granatum HOM05D004717 ORTHO05D005636 2.1e-77 293.1 189 72.5
Potri.007G074500 Populus trichocarpa HOM05D004717 ORTHO05D005636 3.6e-77 292.4 189 71.4
RcHm_v2.0_Chr4g0446911 Rosa chinensis HOM05D004717 ORTHO05D005636 3.6e-77 292.4 189 73.5
Ah.01g024100 Amaranthus hybridus HOM05D004717 ORTHO05D005636 1.1e-76 290.8 189 74.6
CiPaw.05G171500 Carya illinoinensis HOM05D004717 ORTHO05D005636 1.1e-76 290.8 188 73.4
Glyma.16G218800 Glycine max HOM05D004717 ORTHO05D005636 1.1e-76 290.8 189 73.5
Cc11_g03470 Coffea canephora HOM05D004717 ORTHO05D005636 1.4e-76 290.4 189 69.3
Rhsim02G0075200 Rhododendron simsii HOM05D004717 ORTHO05D005636 1.4e-76 290.4 189 72.0
CiPaw.05G171400 Carya illinoinensis HOM05D004717 ORTHO05D005636 3.1e-76 289.3 189 72.0
Nitab4.5_0004979g0110 Nicotiana tabacum HOM05D004717 ORTHO05D005636 3.1e-76 289.3 189 69.8
Oeu003437.1 Olea europaea HOM05D004717 ORTHO05D005636 3.1e-76 289.3 189 69.8
GSVIVG01026135001 Vitis vinifera HOM05D004717 ORTHO05D005636 3.1e-76 289.3 189 72.0
AL6G34580 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 5.2e-76 288.5 188 71.3
CAN.G274.13 Capsicum annuum HOM05D004717 ORTHO05D005636 5.2e-76 288.5 188 70.7
Hma1.2p1_0513F.1_g169470 Hydrangea macrophylla HOM05D004717 ORTHO05D005636 5.2e-76 288.5 189 74.1
arahy.Tifrunner.gnm1.ann1.TS1LPS Arachis hypogaea HOM05D004717 ORTHO05D005636 8.9e-76 287.7 189 72.5
Lj2g0014996 Lotus japonicus HOM05D004717 ORTHO05D005636 8.9e-76 287.7 189 72.5
Sabra07G0063200 Salix brachista HOM05D004717 ORTHO05D005636 1.5e-75 287.0 189 69.3
Aa31LG3G18230 Aethionema arabicum HOM05D006471 ORTHO05D005636 2.0e-75 286.6 192 70.8
Ciclev10016775m.g Citrus clementina HOM05D004717 ORTHO05D005636 2.0e-75 286.6 189 69.8
Peaxi162Scf00681g00024 Petunia axillaris HOM05D004717 ORTHO05D005636 2.6e-75 286.2 189 70.4
AT5G23320 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 4.4e-75 285.4 188 71.3
AUR62012906 Chenopodium quinoa HOM05D004717 ORTHO05D005636 4.4e-75 285.4 188 73.9
Oeu033041.1 Olea europaea HOM05D004717 ORTHO05D005636 4.4e-75 285.4 189 69.3
VMungo0464G0417 Vigna mungo HOM05D004717 ORTHO05D005636 4.4e-75 285.4 189 71.4
arahy.Tifrunner.gnm1.ann1.8YZR55 Arachis hypogaea HOM05D004717 ORTHO05D005636 5.8e-75 285.0 189 71.4
Thecc.05G241200 Theobroma cacao HOM05D004717 ORTHO05D005636 5.8e-75 285.0 183 76.0
Gohir.A11G227800 Gossypium hirsutum HOM05D004717 ORTHO05D005636 9.9e-75 284.3 183 74.3
QL04p036080 Quercus lobata HOM05D004717 ORTHO05D005636 1.3e-74 283.9 189 72.0
Sc08g0003750 Simmondsia chinensis HOM05D004717 ORTHO05D005636 2.2e-74 283.1 189 70.4
Carub.0006s2109 Capsella rubella HOM05D004717 ORTHO05D005636 2.9e-74 282.7 188 69.1
QL04p036464 Quercus lobata HOM05D004717 ORTHO05D005636 2.9e-74 282.7 200 69.0
MSTRG.7889 Avicennia marina HOM05D004717 ORTHO05D005636 3.8e-74 282.3 189 69.8
C03p04250 Brassica napus HOM05D004717 ORTHO05D005636 3.8e-74 282.3 188 70.2
BolC3t12957H Brassica oleracea HOM05D004717 ORTHO05D005636 3.8e-74 282.3 188 70.2
AL6G18770 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 4.9e-74 282.0 188 70.7
AT5G08335 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 4.9e-74 282.0 188 71.3
Gohir.D11G240300 Gossypium hirsutum HOM05D004717 ORTHO05D005636 6.4e-74 281.6 183 73.8
Gorai.007G253700 Gossypium raimondii HOM05D004717 ORTHO05D005636 6.4e-74 281.6 183 73.8
Carub.0006s0723 Capsella rubella HOM05D004717 ORTHO05D005636 8.4e-74 281.2 188 71.3
Solyc04g009010.2 Solanum lycopersicum HOM05D004717 ORTHO05D005636 8.4e-74 281.2 188 69.7
BraA03t09724Z Brassica rapa HOM05D004717 ORTHO05D005636 1.1e-73 280.8 188 70.7
ECA247G4036 Erigeron canadensis HOM05D004717 ORTHO05D005636 1.1e-73 280.8 189 69.8
Phvul.004G144800 Phaseolus vulgaris HOM05D004717 ORTHO05D005636 1.1e-73 280.8 189 70.4
AUR62001133 Chenopodium quinoa HOM05D004717 ORTHO05D005636 1.4e-73 280.4 188 70.2
HanXRQChr08g0237151 Helianthus annuus HOM05D004717 ORTHO05D005636 1.4e-73 280.4 189 69.8
TPR.G28016 Trifolium pratense HOM05D004717 ORTHO05D005636 1.4e-73 280.4 189 71.4
A03p03770 Brassica napus HOM05D004717 ORTHO05D005636 1.9e-73 280.0 188 70.2
PGSC0003DMG400011510 Solanum tuberosum HOM05D004717 ORTHO05D005636 1.9e-73 280.0 188 69.7
EL10Ac9g21225 Beta vulgaris HOM05D004717 ORTHO05D005636 2.4e-73 279.6 189 68.8
Lj3g0022258 Lotus japonicus HOM05D004717 ORTHO05D005636 2.4e-73 279.6 189 71.4
Lj6P714T12 Lonicera japonica HOM05D004717 ORTHO05D005636 4.1e-73 278.9 180 73.3
Duzib177G0848 Durio zibethinus HOM05D004717 ORTHO05D005636 5.4e-73 278.5 183 74.9
Lsat_1_v5_gn_9_25720 Lactuca sativa HOM05D004717 ORTHO05D005636 7.1e-73 278.1 189 68.8
SGA_v2.0_scaffold62G21625 Striga asiatica HOM05D004717 ORTHO05D005636 7.1e-73 278.1 189 68.8
GSVIVG01038778001 Vitis vinifera HOM05D004717 ORTHO05D005636 7.1e-73 278.1 189 70.4
Psat1g123480 Pisum sativum HOM05D004717 ORTHO05D005636 9.2e-73 277.7 189 69.3
CARHR190220 Cardamine hirsuta HOM05D004717 ORTHO05D005636 1.6e-72 276.9 188 68.1
BcaB01g05612 Brassica carinata HOM05D004717 ORTHO05D005636 2.1e-72 276.6 188 70.7
Duzib106G0072 Durio zibethinus HOM05D004717 ORTHO05D005636 2.1e-72 276.6 183 74.3
Nn2g12497 Nelumbo nucifera HOM05D004717 ORTHO05D005636 3.5e-72 275.8 189 67.7
DCAR_027608 Daucus carota HOM05D004717 ORTHO05D005636 4.6e-72 275.4 180 70.6
Migut.L01402 Erythranthe guttata HOM05D004717 ORTHO05D005636 4.6e-72 275.4 189 66.1
Thhalv10014725m.g Eutrema salsugineum HOM05D004717 ORTHO05D005636 4.6e-72 275.4 188 70.2
Medtr6g075160 Medicago truncatula HOM05D004717 ORTHO05D005636 4.6e-72 275.4 189 68.3
CARHR204740 Cardamine hirsuta HOM05D004717 ORTHO05D005636 6.0e-72 275.0 188 69.7
CANSAT11G2572 Cannabis sativa HOM05D004717 ORTHO05D005636 7.8e-72 274.6 189 68.3
EL10Ac7g17906 Beta vulgaris HOM05D004717 ORTHO05D005636 1.7e-71 273.5 187 70.1
CDE02G0493 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 2.3e-71 273.1 188 67.0
TPR.G9035 Trifolium pratense HOM05D004717 ORTHO05D005636 5.1e-71 271.9 188 69.7
Aqoxy6G00094 Aquilegia oxysepala HOM05D004717 ORTHO05D005636 8.6e-71 271.2 189 66.1
Ah.08g214600 Amaranthus hybridus HOM05D004717 ORTHO05D005636 2.5e-70 269.6 189 68.3
Sc17g0002110 Simmondsia chinensis HOM05D004717 ORTHO05D005636 4.3e-70 268.9 188 70.2
Lalb_Chr16g0386851 Lupinus albus HOM05D004717 ORTHO05D005636 5.6e-70 268.5 187 70.6
PSO782G0831 Papaver somniferum HOM05D004717 ORTHO05D005636 9.6e-70 267.7 188 67.6
SGA_v2.0_scaffold8G04231 Striga asiatica HOM05D004717 ORTHO05D005636 1.2e-69 267.3 189 65.6
Migut.E00157 Erythranthe guttata HOM05D004717 ORTHO05D005636 8.1e-69 264.6 189 66.7
Sp6g34610 Schrenkiella parvula HOM05D004717 ORTHO05D005636 3.1e-68 262.7 172 70.9
Lsat_1_v5_gn_5_170960 Lactuca sativa HOM05D004717 ORTHO05D005636 5.2e-68 261.9 188 65.4
unitig_8.g3169 Utricularia gibba HOM05D004717 ORTHO05D005636 9.0e-68 261.2 189 63.5
MBI14_g08135_MAGBIO Magnolia biondii HOM05D004717 ORTHO05D005636 2.2e-66 256.5 189 66.1
SHI07248 Sapria himalayana HOM05D004717 ORTHO05D005636 5.4e-65 251.9 185 64.9
Lj3P847T27 Lonicera japonica HOM05D004717 ORTHO05D005636 1.6e-64 250.4 180 67.2
HPP92_018371 Vanilla planifolia HOM05D004717 ORTHO05D005636 9.6e-62 241.1 184 59.8
Cpa.g.sc59.26 Carica papaya HOM05D004717 ORTHO05D005636 3.6e-61 239.2 187 61.0
HanXRQChr01g0011051 Helianthus annuus HOM05D004717 ORTHO05D005636 1.1e-60 237.7 188 60.1
PSO170G2864 Papaver somniferum HOM05D004717 ORTHO05D005636 5.3e-60 235.3 162 69.1
Actinidia35903 Actinidia chinensis HOM05D004717 ORTHO05D005636 3.8e-58 229.2 180 60.0
CDE04G3142 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 1.4e-57 227.3 162 66.0
Aa31LG11G2780 Aethionema arabicum HOM05D004717 ORTHO05D005636 1.0e-55 221.1 141 68.1
Zm00001eb144100 Zea mays HOM05D004717 ORTHO05D005636 1.0e-55 221.1 156 62.8
DCAR_023472 Daucus carota HOM05D004717 ORTHO05D005636 2.3e-55 219.9 141 72.3
AUR62011721 Chenopodium quinoa HOM05D004717 ORTHO05D005636 8.7e-55 218.0 141 72.3
HanXRQChr17g0556721 Helianthus annuus HOM05D004717 ORTHO05D005636 2.1e-53 213.4 149 67.1
Pp3c3_35430 Physcomitrium patens HOM05D004717 ORTHO05D005636 4.8e-53 212.2 189 54.5
ATR0580G192 Amborella trichopoda HOM05D004717 ORTHO05D005636 1.2e-51 207.6 141 64.5
SMO117G0139 Selaginella moellendorffii HOM05D004717 ORTHO05D005636 1.2e-51 207.6 184 54.3
Rhsim02G0074800 Rhododendron simsii HOM05D004717 ORTHO05D005636 2.6e-51 206.5 189 55.6
Mapoly0062s0094 Marchantia polymorpha HOM05D004717 ORTHO05D005636 1.5e-46 190.7 184 48.9
Sopen04g004190 Solanum pennellii HOM05D004717 ORTHO05D005636 1.2e-43 181.0 110 72.7
TAR381G0283 Trochodendron aralioides HOM05D004717 ORTHO05D005636 2.9e-42 176.4 120 69.2
Glyma.09G169200 Glycine max HOM05D004717 ORTHO05D005636 2.1e-40 170.2 189 50.3
COL.COLO4_20086 Corchorus olitorius HOM05D004717 ORTHO05D005636 5.1e-39 165.6 95 78.9
SalBow2G2042 Salvia bowleyana HOM05D004717 ORTHO05D005636 1.6e-37 160.6 189 46.6
MCO05G386 Micromonas commoda HOM05D004717 ORTHO05D005636 1.5e-35 154.1 188 43.6
PRCOL_00002165 Prasinoderma coloniale HOM05D004717 ORTHO05D005636 2.3e-31 140.2 180 48.3
Haze_27496 Corylus avellana HOM05D004717 ORTHO05D005636 5.7e-30 135.6 179 43.6
SEGI_39005 Sequoiadendron giganteum HOM05D004717 ORTHO05D005636 1.5e-22 110.9 71 62.0
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 3.3e-22 109.8 186 39.8
Ca_23673_v3 Cicer arietinum L. HOM05D004717 ORTHO05D005636 4.4e-22 109.4 120 47.5
Hund05579 Selenicereus undatus HOM05D004717 ORTHO05D005636 4.4e-22 109.4 106 49.1
ECA247G3377 Erigeron canadensis HOM05D004717 ORTHO05D005636 2.8e-21 106.7 65 72.3
Cfa021666 Carpinus fangiana HOM05D004717 ORTHO05D005636 2.4e-20 103.6 183 34.4
AagrBONN_evm.TU.Sc2ySwM_344.2327 Anthoceros agrestis HOM05D004717 ORTHO05D005636 5.3e-20 102.4 113 47.8
Os04g0602900 Oryza sativa ssp. japonica HOM05D004717 ORTHO05D005636 3.4e-19 99.8 71 60.6
AagrBONN_evm.TU.Sc2ySwM_117.4144 Anthoceros agrestis HOM05D004717 ORTHO05D005636 7.7e-19 98.6 104 49.0
Eucgr.D01405 Eucalyptus grandis HOM05D004717 ORTHO05D005636 7.7e-19 98.6 103 51.5
RhsimUnG0160700 Rhododendron simsii HOM05D004717 ORTHO05D005636 1.8e-12 77.4 55 70.9
Actinidia11311 Actinidia chinensis HOM05D004717 ORTHO05D005636 1.4e-07 61.2 36 75.0


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