Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG06G000100 Citrullus lanatus HOM05D007580 ORTHO05D009620 1.0e-86 323.6 182 100.0
CsaV3_6G005830 Cucumis sativus L. HOM05D007580 ORTHO05D009620 2.2e-70 269.2 182 86.3
MELO3C022528.2 Cucumis melo HOM05D007580 ORTHO05D009620 4.7e-68 261.5 182 81.3
Sed0005443 Sechium edule HOM05D007580 ORTHO05D009620 1.3e-49 200.3 182 67.6
QL08p050656 Quercus lobata HOM05D007580 ORTHO05D009620 2.1e-44 183.0 185 58.4
Duzib138G0841 Durio zibethinus HOM05D007580 ORTHO05D009620 1.9e-40 169.9 178 57.9
COL.COLO4_12626 Corchorus olitorius HOM05D007580 ORTHO05D009620 7.1e-40 167.9 177 55.9
Cfa004181 Carpinus fangiana HOM05D007580 ORTHO05D009620 1.2e-39 167.2 185 57.3
Haze_15227 Corylus avellana HOM05D007580 ORTHO05D009620 2.1e-39 166.4 185 55.7
Duzib133G0099 Durio zibethinus HOM05D007580 ORTHO05D009620 2.1e-39 166.4 178 62.4
Sabra14G0055200 Salix brachista HOM05D007580 ORTHO05D009620 6.0e-39 164.9 177 57.6
Gohir.A08G129400 Gossypium hirsutum HOM05D007580 ORTHO05D009620 3.9e-38 162.2 178 57.3
CANSAT56G4452 Cannabis sativa HOM05D007580 ORTHO05D009620 3.3e-37 159.1 179 53.6
Gorai.004G156400 Gossypium raimondii HOM05D007580 ORTHO05D009620 5.6e-37 158.3 176 57.4
Gohir.D08G150700 Gossypium hirsutum HOM05D007580 ORTHO05D009620 9.5e-37 157.5 176 57.4
Thecc.01G368700 Theobroma cacao HOM05D007580 ORTHO05D009620 1.2e-36 157.1 178 58.4
Potri.002G153000 Populus trichocarpa HOM05D007580 ORTHO05D009620 2.1e-36 156.4 172 57.6
Prupe.2G154500 Prunus persica HOM05D007580 ORTHO05D009620 3.6e-36 155.6 176 55.1
MD07G1128600 Malus domestica HOM05D007580 ORTHO05D009620 4.7e-36 155.2 175 54.3
Manes.05G040200 Manihot esculenta HOM05D007580 ORTHO05D009620 1.1e-35 154.1 186 52.7
Sabra02G0121300 Salix brachista HOM05D007580 ORTHO05D009620 8.9e-35 151.0 173 58.4
Lalb_Chr01g0021151 Lupinus albus HOM05D007580 ORTHO05D009620 1.5e-34 150.2 176 54.0
Potri.014G077000 Populus trichocarpa HOM05D007580 ORTHO05D009620 2.6e-34 149.4 170 55.3
RcHm_v2.0_Chr1g0352211 Rosa chinensis HOM05D007580 ORTHO05D009620 1.7e-33 146.7 174 54.6
TWI14G1086 Tripterygium wilfordii HOM05D007580 ORTHO05D009620 4.9e-33 145.2 178 52.8
FAN03G2022 Fragaria x ananassa HOM05D007580 ORTHO05D009620 8.4e-33 144.4 172 55.2
FAN06G3292 Fragaria x ananassa HOM05D007580 ORTHO05D009620 8.4e-33 144.4 171 55.6
FAN06G5062 Fragaria x ananassa HOM05D007580 ORTHO05D009620 8.4e-33 144.4 171 55.6
FAN10G2444 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.4e-32 143.7 171 55.0
Manes.01G262404 Manihot esculenta HOM05D007580 ORTHO05D009620 1.9e-32 143.3 184 52.7
Ciclev10023708m.g Citrus clementina HOM05D007580 ORTHO05D009620 5.4e-32 141.7 182 49.5
Medtr7g076270 Medicago truncatula HOM05D007580 ORTHO05D009620 3.5e-31 139.0 182 50.0
TPR.G37829 Trifolium pratense HOM05D007580 ORTHO05D009620 4.6e-31 138.7 172 50.6
FAN01G0874 Fragaria x ananassa HOM05D007580 ORTHO05D009620 2.3e-30 136.3 172 52.9
Hma1.2p1_0398F.1_g143830 Hydrangea macrophylla HOM05D007580 ORTHO05D009620 3.0e-30 136.0 182 46.7
Glyma.18G227800 Glycine max HOM05D007580 ORTHO05D009620 1.6e-28 130.2 179 49.7
Cpa.g.sc18.198 Carica papaya HOM05D007580 ORTHO05D009620 8.9e-27 124.4 151 53.0
VMungo1383G0280 Vigna mungo HOM05D007580 ORTHO05D009620 2.2e-25 119.8 180 47.8
Solyc01g091790.2 Solanum lycopersicum HOM05D007580 ORTHO05D009620 4.9e-25 118.6 170 47.1
Nitab4.5_0004550g0100 Nicotiana tabacum HOM05D007580 ORTHO05D009620 6.4e-25 118.2 188 45.7
PGSC0003DMG400017056 Solanum tuberosum HOM05D007580 ORTHO05D009620 6.4e-25 118.2 172 52.9
TAR656G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 8.4e-25 117.9 182 42.9
TAR003G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.4e-24 117.1 182 42.3
DCAR_006906 Daucus carota HOM05D007580 ORTHO05D009620 1.9e-24 116.7 184 46.7
Sopen01g037570 Solanum pennellii HOM05D007580 ORTHO05D009620 5.4e-24 115.2 170 47.1
CiPaw.01G053500 Carya illinoinensis HOM05D007580 ORTHO05D009620 2.1e-23 113.2 165 47.9
Migut.B01687 Erythranthe guttata HOM05D007580 ORTHO05D009620 2.1e-23 113.2 171 43.3
Oeu024417.1 Olea europaea HOM05D007580 ORTHO05D009620 3.5e-23 112.5 191 44.0
CiPaw.01G052900 Carya illinoinensis HOM05D007580 ORTHO05D009620 1.3e-22 110.5 160 48.1
TAR375G0300 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.5e-21 107.1 180 41.1
GSVIVG01027528001 Vitis vinifera HOM05D007580 ORTHO05D009620 3.3e-21 105.9 175 40.6
Aqoxy7G00453 Aquilegia oxysepala HOM05D007580 ORTHO05D009620 9.6e-21 104.4 174 39.7
Nn1g01349 Nelumbo nucifera HOM05D007580 ORTHO05D009620 9.6e-21 104.4 171 41.5
Psat0s1132g0080 Pisum sativum HOM05D007580 ORTHO05D009620 4.8e-20 102.1 189 42.3
Actinidia33444 Actinidia chinensis HOM05D007580 ORTHO05D009620 6.2e-20 101.7 172 40.1
Nitab4.5_0010430g0050 Nicotiana tabacum HOM05D007580 ORTHO05D009620 6.2e-20 101.7 173 46.8
CARHR000490 Cardamine hirsuta HOM05D007580 ORTHO05D009620 1.8e-19 100.1 171 39.8
Ca_07865_v3 Cicer arietinum L. HOM05D007580 ORTHO05D009620 2.4e-19 99.8 186 39.8
Rhsim01G0155700 Rhododendron simsii HOM05D007580 ORTHO05D009620 5.3e-19 98.6 171 45.0
Thhalv10009990m.g Eutrema salsugineum HOM05D007580 ORTHO05D009620 9.0e-19 97.8 170 40.0
CSS0034624 Camellia sinensis var. sinensis HOM05D007580 ORTHO05D009620 1.5e-18 97.1 182 39.6
AT1G01840 Arabidopsis thaliana HOM05D007580 ORTHO05D009620 4.5e-18 95.5 181 40.9
PGR031G3829 Punica granatum HOM05D007580 ORTHO05D009620 4.5e-18 95.5 179 45.3
AL1G10480 Arabidopsis lyrata HOM05D007580 ORTHO05D009620 5.8e-18 95.1 175 40.0
Carub.0001s0037 Capsella rubella HOM05D007580 ORTHO05D009620 5.8e-18 95.1 172 41.3
Phvul.008G070400 Phaseolus vulgaris HOM05D007580 ORTHO05D009620 7.6e-18 94.7 162 44.4
Lsat_1_v5_gn_7_8361 Lactuca sativa HOM05D007580 ORTHO05D009620 1.3e-17 94.0 175 40.0
PSO478G4117 Papaver somniferum HOM05D007580 ORTHO05D009620 1.7e-17 93.6 197 38.1
PSO782G0900 Papaver somniferum HOM05D007580 ORTHO05D009620 6.4e-17 91.7 199 38.2
PSO782G1514 Papaver somniferum HOM05D007580 ORTHO05D009620 1.4e-16 90.5 200 37.5
Sc23g0003300 Simmondsia chinensis HOM05D007580 ORTHO05D009620 1.4e-16 90.5 171 40.4
BraA10t42299Z Brassica rapa HOM05D007580 ORTHO05D009620 7.1e-16 88.2 170 38.8
THA.LOC104814091 Tarenaya hassleriana HOM05D007580 ORTHO05D009620 1.2e-15 87.4 176 40.9
Lsat_1_v5_gn_7_8421 Lactuca sativa HOM05D007580 ORTHO05D009620 2.1e-15 86.7 175 38.9
A10p00190 Brassica napus HOM05D007580 ORTHO05D009620 2.7e-15 86.3 170 38.2
Peaxi162Scf00021g00055 Petunia axillaris HOM05D007580 ORTHO05D009620 2.7e-15 86.3 181 39.8
Glyma.09G264200 Glycine max HOM05D007580 ORTHO05D009620 3.5e-15 85.9 104 53.8
BcaB03g13622 Brassica carinata HOM05D007580 ORTHO05D009620 4.6e-15 85.5 173 39.3
BolC5t28812H Brassica oleracea HOM05D007580 ORTHO05D009620 4.6e-15 85.5 173 39.3
Sp1g00440 Schrenkiella parvula HOM05D007580 ORTHO05D009620 6.7e-14 81.6 176 38.6
ECA236G4638 Erigeron canadensis HOM05D007580 ORTHO05D009620 7.4e-13 78.2 177 37.3
Lj1g0023268 Lotus japonicus HOM05D007580 ORTHO05D009620 7.4e-13 78.2 173 40.5
Aa31LG1G11200 Aethionema arabicum HOM05D007580 ORTHO05D009620 2.1e-12 76.6 176 36.9
HanXRQChr04g0121781 Helianthus annuus HOM05D007580 ORTHO05D009620 2.8e-12 76.3 175 40.6
Ah.05g176020 Amaranthus hybridus HOM05D007580 ORTHO05D009620 8.1e-12 74.7 173 37.0
C05p00230 Brassica napus HOM05D007580 ORTHO05D009620 1.2e-10 70.9 171 35.1
vmacro20972 Vaccinium macrocarpon HOM05D007580 ORTHO05D009620 3.4e-10 69.3 99 47.5
MBI12_g06406_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 1.7e-09 67.0 174 36.8
MBI12_g45243_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 1.7e-09 67.0 174 36.8
SGA_v2.0_scaffold95G28871 Striga asiatica HOM05D007580 ORTHO05D009620 3.8e-09 65.9 172 41.3
SalBow3G0911 Salvia bowleyana HOM05D007580 ORTHO05D009620 1.1e-08 64.3 174 39.1
AUR62026657 Chenopodium quinoa HOM05D007580 ORTHO05D009620 2.1e-07 60.1 153 41.2
FAN10G0406 Fragaria x ananassa HOM05D007580 ORTHO05D009620 2.1e-07 60.1 75 58.7
AUR62033366 Chenopodium quinoa HOM05D007580 ORTHO05D009620 3.5e-07 59.3 102 48.0
Dinv32421 Davidia involucrata HOM05D007580 ORTHO05D009620 6.7e-06 55.1 112 43.8


User provided reference genes

Program Settings