Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G025710 Citrullus lanatus HOM05D006540 ORTHO05D008202 1.8e-185 652.5 344 100.0
CiPaw.05G182700 Carya illinoinensis HOM05D006540 ORTHO05D008202 1.0e-132 477.2 349 76.5
Atru.chr11.2104 Acer truncatum HOM05D006540 ORTHO05D008202 3.1e-129 465.7 347 74.1
Cfa009208 Carpinus fangiana HOM05D006540 ORTHO05D008202 9.3e-126 454.1 347 74.9
MD13G1101900 Malus domestica HOM05D006540 ORTHO05D008202 1.6e-125 453.4 355 72.7
MD16G1102400 Malus domestica HOM05D006540 ORTHO05D008202 8.7e-124 447.6 352 71.0
Cpa.g.sc33.16 Carica papaya HOM05D006540 ORTHO05D008202 1.5e-123 446.8 352 69.0
Phvul.003G064400 Phaseolus vulgaris HOM05D006540 ORTHO05D008202 7.4e-123 444.5 348 71.8
PGR102G2745 Punica granatum HOM05D006540 ORTHO05D008202 7.4e-123 444.5 349 71.3
Manes.13G024900 Manihot esculenta HOM05D006540 ORTHO05D008202 1.4e-121 440.3 343 71.4
SalBow2G2200 Salvia bowleyana HOM05D006540 ORTHO05D008202 7.6e-120 434.5 359 68.5
RcHm_v2.0_Chr4g0432921 Rosa chinensis HOM05D006540 ORTHO05D008202 1.7e-119 433.3 359 69.4
MELO3C011955.2 Cucumis melo HOM05D006540 ORTHO05D008202 5.0e-119 431.8 281 84.7
Ciclev10032003m.g Citrus clementina HOM05D006540 ORTHO05D008202 5.5e-118 428.3 346 68.8
CsaV3_5G031170 Cucumis sativus L. HOM05D006540 ORTHO05D008202 5.5e-118 428.3 274 85.8
MSTRG.568 Avicennia marina HOM05D006540 ORTHO05D008202 9.3e-118 427.6 354 69.2
Prupe.1G243900 Prunus persica HOM05D006540 ORTHO05D008202 1.6e-117 426.8 351 69.8
Duzib268G1404 Durio zibethinus HOM05D006540 ORTHO05D008202 2.1e-117 426.4 352 70.7
Migut.K00595 Erythranthe guttata HOM05D006540 ORTHO05D008202 2.1e-117 426.4 356 67.4
Dinv24788 Davidia involucrata HOM05D006540 ORTHO05D008202 1.0e-116 424.1 353 68.6
Hma1.2p1_0223F.1_g093990 Hydrangea macrophylla HOM05D006540 ORTHO05D008202 1.3e-116 423.7 376 65.4
Glyma.17G134500 Glycine max HOM05D006540 ORTHO05D008202 1.8e-116 423.3 345 71.0
Eucgr.B03288 Eucalyptus grandis HOM05D006540 ORTHO05D008202 3.0e-116 422.5 356 68.0
FAN22G2305 Fragaria x ananassa HOM05D006540 ORTHO05D008202 3.9e-116 422.2 359 67.7
FAN17G1845 Fragaria x ananassa HOM05D006540 ORTHO05D008202 6.7e-116 421.4 359 67.4
FAN07G1259 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.1e-115 420.6 359 67.4
FvH4_4g25530 Fragaria vesca HOM05D006540 ORTHO05D008202 2.5e-115 419.5 359 67.1
FAN12G0822 Fragaria x ananassa HOM05D006540 ORTHO05D008202 2.5e-115 419.5 359 67.1
Oeu059907.1 Olea europaea HOM05D006540 ORTHO05D008202 7.4e-115 417.9 360 67.8
QL03p058139 Quercus lobata HOM05D006540 ORTHO05D008202 8.2e-114 414.5 403 61.0
Actinidia37429 Actinidia chinensis HOM05D006540 ORTHO05D008202 2.4e-113 412.9 350 67.1
Lj4g0023216 Lotus japonicus HOM05D006540 ORTHO05D008202 2.4e-113 412.9 348 66.7
Aa31LG2G5960 Aethionema arabicum HOM05D006540 ORTHO05D008202 3.1e-113 412.5 359 65.5
BcaC06g33900 Brassica carinata HOM05D006540 ORTHO05D008202 3.1e-113 412.5 355 66.8
vmacro16198 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 6.9e-113 411.4 353 66.6
Thhalv10004491m.g Eutrema salsugineum HOM05D006540 ORTHO05D008202 9.0e-113 411.0 360 65.8
CANSAT35G0572 Cannabis sativa HOM05D006540 ORTHO05D008202 2.6e-112 409.5 350 68.0
Cc11_g15700 Coffea canephora HOM05D006540 ORTHO05D008202 5.9e-112 408.3 359 67.1
C07p35560 Brassica napus HOM05D006540 ORTHO05D008202 1.7e-111 406.8 355 65.9
BolC7t44080H Brassica oleracea HOM05D006540 ORTHO05D008202 1.7e-111 406.8 355 65.9
Gorai.002G186600 Gossypium raimondii HOM05D006540 ORTHO05D008202 1.7e-111 406.8 354 68.6
Haze_12245 Corylus avellana HOM05D006540 ORTHO05D008202 5.0e-111 405.2 366 66.9
Sp2g15690 Schrenkiella parvula HOM05D006540 ORTHO05D008202 6.5e-111 404.8 359 64.3
A06p41910 Brassica napus HOM05D006540 ORTHO05D008202 1.4e-110 403.7 357 64.1
BraA06t27110Z Brassica rapa HOM05D006540 ORTHO05D008202 1.4e-110 403.7 357 64.1
Gohir.D01G150500 Gossypium hirsutum HOM05D006540 ORTHO05D008202 1.9e-110 403.3 354 68.4
Sed0005489 Sechium edule HOM05D006540 ORTHO05D008202 1.9e-110 403.3 274 81.0
CARHR147570 Cardamine hirsuta HOM05D006540 ORTHO05D008202 5.5e-110 401.7 359 63.8
TWI18G0987 Tripterygium wilfordii HOM05D006540 ORTHO05D008202 2.1e-109 399.8 355 65.6
arahy.Tifrunner.gnm1.ann1.LD9JWE Arachis hypogaea HOM05D006540 ORTHO05D008202 4.6e-109 398.7 351 67.2
arahy.Tifrunner.gnm1.ann1.NX3C69 Arachis hypogaea HOM05D006540 ORTHO05D008202 7.9e-109 397.9 355 66.8
AL5G15370 Arabidopsis lyrata HOM05D006540 ORTHO05D008202 1.8e-108 396.7 354 63.6
AT3G26580 Arabidopsis thaliana HOM05D006540 ORTHO05D008202 8.8e-108 394.4 355 63.4
TAR622G1382 Trochodendron aralioides HOM05D006540 ORTHO05D008202 8.8e-108 394.4 351 65.0
EL10Ac6g13801 Beta vulgaris HOM05D006540 ORTHO05D008202 1.7e-106 390.2 358 64.2
Actinidia15092 Actinidia chinensis HOM05D006540 ORTHO05D008202 2.8e-106 389.4 349 64.8
BcaC06g31063 Brassica carinata HOM05D006540 ORTHO05D008202 4.8e-106 388.7 357 62.7
THA.LOC104825662 Tarenaya hassleriana HOM05D006540 ORTHO05D008202 4.1e-105 385.6 351 62.1
Rhsim12G0110600 Rhododendron simsii HOM05D006540 ORTHO05D008202 5.3e-105 385.2 356 64.6
Sabra13G0070200 Salix brachista HOM05D006540 ORTHO05D008202 4.5e-104 382.1 341 65.4
Lj6A811T79 Lonicera japonica HOM05D006540 ORTHO05D008202 7.7e-104 381.3 355 62.3
Duzib248G0112 Durio zibethinus HOM05D006540 ORTHO05D008202 1.3e-103 380.6 351 65.2
Potri.013G090000 Populus trichocarpa HOM05D006540 ORTHO05D008202 1.1e-102 377.5 340 64.7
COL.COLO4_24263 Corchorus olitorius HOM05D006540 ORTHO05D008202 2.5e-102 376.3 346 62.1
Carub.0005s0457 Capsella rubella HOM05D006540 ORTHO05D008202 7.2e-102 374.8 354 61.6
DCAR_024432 Daucus carota HOM05D006540 ORTHO05D008202 2.7e-101 372.9 325 64.0
Ca_22583_v3 Cicer arietinum L. HOM05D006540 ORTHO05D008202 6.1e-101 371.7 344 63.7
Medtr8g069450 Medicago truncatula HOM05D006540 ORTHO05D008202 1.8e-100 370.2 345 64.6
PGSC0003DMG400018605 Solanum tuberosum HOM05D006540 ORTHO05D008202 1.8e-100 370.2 357 61.3
Thecc.02G259400 Theobroma cacao HOM05D006540 ORTHO05D008202 3.0e-100 369.4 352 63.9
vmacro01127 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 8.8e-100 367.9 348 59.2
Gohir.A01G159600 Gossypium hirsutum HOM05D006540 ORTHO05D008202 4.4e-99 365.5 354 62.7
Peaxi162Scf00128g00138 Petunia axillaris HOM05D006540 ORTHO05D008202 5.7e-99 365.2 361 59.8
Psat4g116680 Pisum sativum HOM05D006540 ORTHO05D008202 2.8e-98 362.8 357 63.0
CDE09G1037 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 3.7e-98 362.5 344 62.5
Nitab4.5_0000007g0060 Nicotiana tabacum HOM05D006540 ORTHO05D008202 4.8e-98 362.1 358 60.6
CDE02G2769 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 1.4e-97 360.5 344 60.2
Nitab4.5_0003628g0010 Nicotiana tabacum HOM05D006540 ORTHO05D008202 1.6e-96 357.1 358 60.1
unitig_21.g20872 Utricularia gibba HOM05D006540 ORTHO05D008202 8.5e-95 351.3 352 59.9
Aqoxy3G01202 Aquilegia oxysepala HOM05D006540 ORTHO05D008202 2.5e-94 349.7 353 59.2
Lalb_Chr05g0228421 Lupinus albus HOM05D006540 ORTHO05D008202 2.5e-94 349.7 344 60.5
Ah.03g133040 Amaranthus hybridus HOM05D006540 ORTHO05D008202 7.2e-94 348.2 358 60.6
Sc04g0009450 Simmondsia chinensis HOM05D006540 ORTHO05D008202 1.2e-93 347.4 352 59.1
GSVIVG01004073001 Vitis vinifera HOM05D006540 ORTHO05D008202 2.3e-92 343.2 196 85.7
AUR62024282 Chenopodium quinoa HOM05D006540 ORTHO05D008202 6.7e-92 341.7 350 61.4
Sopen05g008320 Solanum pennellii HOM05D006540 ORTHO05D008202 8.8e-92 341.3 359 57.1
ECA233G5619 Erigeron canadensis HOM05D006540 ORTHO05D008202 4.4e-91 339.0 283 66.8
Lsat_1_v5_gn_8_152220 Lactuca sativa HOM05D006540 ORTHO05D008202 7.5e-91 338.2 364 58.5
CSS0000303 Camellia sinensis var. sinensis HOM05D006540 ORTHO05D008202 9.7e-91 337.8 362 57.7
CAN.G832.5 Capsicum annuum HOM05D006540 ORTHO05D008202 2.2e-90 336.7 359 57.7
PSO017G4849 Papaver somniferum HOM05D006540 ORTHO05D008202 2.2e-90 336.7 368 56.5
Nn4g22628 Nelumbo nucifera HOM05D006540 ORTHO05D008202 7.0e-89 331.6 193 84.5
ATR0686G190 Amborella trichopoda HOM05D006540 ORTHO05D008202 9.1e-89 331.3 284 67.3
VMungo0251G1250 Vigna mungo HOM05D006540 ORTHO05D008202 1.0e-87 327.8 278 69.1
Rhsim12G0041000 Rhododendron simsii HOM05D006540 ORTHO05D008202 5.0e-87 325.5 431 49.4
HanXRQChr08g0208131 Helianthus annuus HOM05D006540 ORTHO05D008202 5.5e-86 322.0 368 55.4
PSO478G4529 Papaver somniferum HOM05D006540 ORTHO05D008202 1.4e-84 317.4 354 56.2
AUR62005459 Chenopodium quinoa HOM05D006540 ORTHO05D008202 9.8e-83 311.2 350 57.4
MBI10_g13027_MAGBIO Magnolia biondii HOM05D006540 ORTHO05D008202 8.0e-77 291.6 392 50.3
TPR.G17765 Trifolium pratense HOM05D006540 ORTHO05D008202 8.8e-76 288.1 323 57.0
HPP92_002022 Vanilla planifolia HOM05D006540 ORTHO05D008202 8.6e-71 271.6 295 54.9
BcaB01g00564 Brassica carinata HOM05D006540 ORTHO05D008202 5.6e-70 268.9 233 64.8
TAR374G0845 Trochodendron aralioides HOM05D006540 ORTHO05D008202 2.3e-63 246.9 280 56.8
Os03g0428800 Oryza sativa ssp. japonica HOM05D006540 ORTHO05D008202 4.0e-60 236.1 201 62.7
Zm00001eb096140 Zea mays HOM05D006540 ORTHO05D008202 7.3e-54 215.3 285 49.1
AagrBONN_evm.TU.Sc2ySwM_340.367 Anthoceros agrestis HOM05D006540 ORTHO05D008202 1.8e-52 210.7 245 49.0
Mapoly0037s0067 Marchantia polymorpha HOM05D006540 ORTHO05D008202 1.9e-49 200.7 245 48.2
SEGI_37038 Sequoiadendron giganteum HOM05D006540 ORTHO05D008202 4.6e-48 196.1 173 53.8
Pp3c27_6670 Physcomitrium patens HOM05D006540 ORTHO05D008202 1.8e-44 184.1 193 48.2
SMO347G0417 Selaginella moellendorffii HOM05D006540 ORTHO05D008202 5.8e-43 179.1 249 43.4
BcaC06g33898 Brassica carinata HOM05D006540 ORTHO05D008202 1.4e-25 121.3 82 68.3
Cre12.g528050 Chlamydomonas reinhardtii HOM05D006540 ORTHO05D008202 4.0e-20 103.2 153 38.6
Oeu029879.1 Olea europaea HOM05D006540 ORTHO05D008202 2.6e-19 100.5 74 66.2
RcHm_v2.0_Chr5g0067811 Rosa chinensis HOM05D006540 ORTHO05D008202 8.4e-18 95.5 61 83.6
CBR_g8379 Chara braunii HOM05D006540 ORTHO05D008202 1.9e-17 94.4 144 38.9
QL04p066147 Quercus lobata HOM05D006540 ORTHO05D008202 2.5e-14 84.0 72 72.2
PRCOL_00004949 Prasinoderma coloniale HOM05D006540 ORTHO05D008202 7.4e-14 82.4 214 32.7
MCO07G599 Micromonas commoda HOM05D006540 ORTHO05D008202 1.5e-11 74.7 246 28.5
TAR625G0150 Trochodendron aralioides HOM05D006540 ORTHO05D008202 2.9e-10 70.5 97 50.5
unitig_744.g24293 Utricularia gibba HOM05D006540 ORTHO05D008202 3.8e-10 70.1 44 68.2
Solyc05g013480.4 Solanum lycopersicum HOM05D006540 ORTHO05D008202 1.5e-06 58.2 195 34.4
Pp3c6_29630 Physcomitrium patens HOM05D006540 ORTHO05D008202 5.7e-06 56.2 88 38.6


User provided reference genes

Program Settings