Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G024400 Citrullus lanatus HOM05D003874 ORTHO05D004545 1.2e-186 656.4 336 100.0
MELO3C022165.2 Cucumis melo HOM05D003874 ORTHO05D004545 6.0e-162 574.3 337 87.2
ClCG08G000760 Citrullus lanatus HOM05D003874 ORTHO05D004545 1.4e-155 553.1 338 86.4
CsaV3_5G039860 Cucumis sativus L. HOM05D003874 ORTHO05D004545 1.9e-155 552.7 337 84.0
MELO3C012083.2 Cucumis melo HOM05D003874 ORTHO05D004545 1.2e-146 523.5 338 82.0
CsaV3_5G032550 Cucumis sativus L. HOM05D003874 ORTHO05D004545 9.7e-144 513.8 338 82.0
Sed0026799 Sechium edule HOM05D003874 ORTHO05D004545 1.1e-139 500.4 343 79.3
Sed0021145 Sechium edule HOM05D003874 ORTHO05D004545 1.1e-126 457.2 399 64.9
Sabra13G0085100 Salix brachista HOM05D003874 ORTHO05D004545 2.4e-73 280.0 348 49.7
Cfa008075 Carpinus fangiana HOM05D003874 ORTHO05D004545 6.8e-73 278.5 352 49.7
CANSAT21G0097 Cannabis sativa HOM05D003874 ORTHO05D004545 7.6e-72 275.0 343 48.1
MD10G1004400 Malus domestica HOM05D003874 ORTHO05D004545 1.3e-71 274.2 353 48.4
Prupe.8G006800 Prunus persica HOM05D003874 ORTHO05D004545 1.3e-71 274.2 335 50.1
RcHm_v2.0_Chr6g0251151 Rosa chinensis HOM05D003874 ORTHO05D004545 3.8e-71 272.7 340 49.4
Dinv22112 Davidia involucrata HOM05D003874 ORTHO05D004545 1.1e-70 271.2 337 49.0
Dinv37410 Davidia involucrata HOM05D003874 ORTHO05D004545 1.4e-70 270.8 332 51.2
FAN20G2080 Fragaria x ananassa HOM05D003874 ORTHO05D004545 2.4e-70 270.0 348 49.4
Manes.02G201800 Manihot esculenta HOM05D003874 ORTHO05D004545 2.4e-70 270.0 341 49.0
Haze_13960 Corylus avellana HOM05D003874 ORTHO05D004545 3.2e-70 269.6 382 46.6
Potri.019G071300 Populus trichocarpa HOM05D003874 ORTHO05D004545 7.1e-70 268.5 360 46.1
Duzib268G0037 Durio zibethinus HOM05D003874 ORTHO05D004545 9.2e-70 268.1 377 45.4
FAN24G1984 Fragaria x ananassa HOM05D003874 ORTHO05D004545 2.7e-69 266.5 347 49.3
Gorai.013G133000 Gossypium raimondii HOM05D003874 ORTHO05D004545 3.5e-69 266.2 367 45.0
Gohir.D13G118600 Gossypium hirsutum HOM05D003874 ORTHO05D004545 6.0e-69 265.4 370 45.1
FvH4_2g00770 Fragaria vesca HOM05D003874 ORTHO05D004545 7.8e-69 265.0 347 49.0
QL09p001799 Quercus lobata HOM05D003874 ORTHO05D004545 7.8e-69 265.0 357 45.7
COL.COLO4_25146 Corchorus olitorius HOM05D003874 ORTHO05D004545 1.3e-68 264.2 387 43.7
Gohir.A13G115500 Gossypium hirsutum HOM05D003874 ORTHO05D004545 1.3e-68 264.2 370 45.1
FAN27G1922 Fragaria x ananassa HOM05D003874 ORTHO05D004545 6.6e-68 261.9 347 47.6
Thecc.08G178800 Theobroma cacao HOM05D003874 ORTHO05D004545 5.6e-67 258.8 369 45.8
Ciclev10020185m.g Citrus clementina HOM05D003874 ORTHO05D004545 9.6e-67 258.1 362 45.9
Manes.18G116100 Manihot esculenta HOM05D003874 ORTHO05D004545 1.3e-66 257.7 358 46.4
Cpa.g.sc21.87 Carica papaya HOM05D003874 ORTHO05D004545 1.6e-66 257.3 389 46.5
CiPaw.03G014100 Carya illinoinensis HOM05D003874 ORTHO05D004545 2.8e-66 256.5 383 44.4
TAR628G1590 Trochodendron aralioides HOM05D003874 ORTHO05D004545 8.1e-66 255.0 359 46.0
Potri.013G099200 Populus trichocarpa HOM05D003874 ORTHO05D004545 1.4e-65 254.2 358 45.5
Atru.chr13.2495 Acer truncatum HOM05D003874 ORTHO05D004545 3.1e-65 253.1 341 48.1
Duzib177G0949 Durio zibethinus HOM05D003874 ORTHO05D004545 4.0e-65 252.7 374 43.9
Atru.chr13.2507 Acer truncatum HOM05D003874 ORTHO05D004545 6.9e-65 251.9 341 48.1
TWI18G0284 Tripterygium wilfordii HOM05D003874 ORTHO05D004545 9.0e-65 251.5 362 44.5
CiPaw.04G009100 Carya illinoinensis HOM05D003874 ORTHO05D004545 5.8e-64 248.8 369 46.6
TWI75G0660 Tripterygium wilfordii HOM05D003874 ORTHO05D004545 4.2e-62 242.7 361 44.9
Sabra19G0083400 Salix brachista HOM05D003637 ORTHO05D004175 5.4e-62 242.3 408 41.4
CSS0015095 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 3.0e-60 236.5 334 42.8
MD05G1003400 Malus domestica HOM05D003874 ORTHO05D004545 3.0e-60 236.5 359 44.6
Cc10_g08580 Coffea canephora HOM05D003874 ORTHO05D004545 5.1e-60 235.7 357 43.7
CSS0009242 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 1.1e-59 234.6 334 42.5
Rhsim12G0002900 Rhododendron simsii HOM05D003874 ORTHO05D004545 1.1e-59 234.6 364 42.0
TAR376G0450 Trochodendron aralioides HOM05D003874 ORTHO05D004545 9.6e-59 231.5 363 43.3
Actinidia29373 Actinidia chinensis HOM05D003874 ORTHO05D004545 2.8e-58 229.9 398 39.7
Actinidia03528 Actinidia chinensis HOM05D003874 ORTHO05D004545 4.0e-57 226.1 402 38.3
Nn5g27385 Nelumbo nucifera HOM05D003874 ORTHO05D004545 6.9e-57 225.3 369 42.5
vmacro00941 Vaccinium macrocarpon HOM05D003874 ORTHO05D004545 6.4e-55 218.8 357 39.2
Sabra13G0083800 Salix brachista HOM05D003874 ORTHO05D004545 2.4e-54 216.9 306 45.4
Nitab4.5_0000980g0270 Nicotiana tabacum HOM05D003874 ORTHO05D004545 5.4e-54 215.7 330 41.5
CSS0025181 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 7.9e-53 211.8 350 42.0
PGR042G0135 Punica granatum HOM05D003874 ORTHO05D004545 1.3e-52 211.1 341 42.8
Eucgr.F02945 Eucalyptus grandis HOM05D003874 ORTHO05D004545 2.3e-52 210.3 404 38.4
MBI03_g29107_MAGBIO Magnolia biondii HOM05D003874 ORTHO05D004545 1.9e-51 207.2 389 38.8
SGA_v2.0_scaffold118G32614 Striga asiatica HOM05D003874 ORTHO05D004545 3.3e-51 206.5 332 41.6
Lsat_1_v5_gn_9_75521 Lactuca sativa HOM05D003874 ORTHO05D004545 5.6e-51 205.7 340 42.6
Migut.C01383 Erythranthe guttata HOM05D003874 ORTHO05D004545 1.6e-50 204.1 336 40.8
Peaxi162Scf00078g00734 Petunia axillaris HOM05D003874 ORTHO05D004545 1.6e-50 204.1 355 38.9
SGA_v2.0_scaffold24G10651 Striga asiatica HOM05D003874 ORTHO05D004545 4.8e-50 202.6 339 41.0
DCAR_003510 Daucus carota HOM05D003874 ORTHO05D004545 1.0e-47 194.9 327 39.4
Oeu028635.2 Olea europaea HOM05D003874 ORTHO05D004545 1.3e-47 194.5 358 39.4
Aqoxy6G00117 Aquilegia oxysepala HOM05D003874 ORTHO05D004545 1.7e-47 194.1 338 39.9
ClCG11G008410 Citrullus lanatus HOM05D003874 ORTHO05D004545 6.5e-47 192.2 369 36.9
Hma1.2p1_0016F.1_g010740 Hydrangea macrophylla HOM05D003874 ORTHO05D004545 1.1e-46 191.4 299 42.8
Hma1.2p1_0016F.1_g010745 Hydrangea macrophylla HOM05D003874 ORTHO05D004545 1.1e-46 191.4 299 42.8
MSTRG.1601 Avicennia marina HOM05D003874 ORTHO05D004545 1.4e-46 191.0 333 39.6
Nitab4.5_0000283g0160 Nicotiana tabacum HOM05D003874 ORTHO05D004545 2.5e-46 190.3 330 39.4
CsaV3_2G033240 Cucumis sativus L. HOM05D003874 ORTHO05D004545 3.5e-45 186.4 363 37.7
Aa31LG9G4130 Aethionema arabicum HOM05D003874 ORTHO05D004545 6.0e-45 185.7 335 40.6
Thhalv10025948m.g Eutrema salsugineum HOM05D003874 ORTHO05D004545 1.0e-44 184.9 327 37.9
Nitab4.5_0000554g0030 Nicotiana tabacum HOM05D003874 ORTHO05D004545 2.3e-44 183.7 374 36.9
PSO170G4959 Papaver somniferum HOM05D003874 ORTHO05D004545 2.3e-44 183.7 363 37.2
SalBow1G3841 Salvia bowleyana HOM05D003874 ORTHO05D004545 3.9e-44 183.0 335 37.6
Nitab4.5_0000213g0070 Nicotiana tabacum HOM05D003874 ORTHO05D004545 5.1e-44 182.6 376 34.8
SalBow6G4185 Salvia bowleyana HOM05D003874 ORTHO05D004545 6.7e-44 182.2 334 38.6
PSO017G0683 Papaver somniferum HOM05D003874 ORTHO05D004545 1.9e-43 180.6 350 39.1
CDE08G0633 Ceratophyllum demersum HOM05D003874 ORTHO05D004545 5.7e-43 179.1 362 34.0
SalBow7G3598 Salvia bowleyana HOM05D003874 ORTHO05D004545 5.7e-43 179.1 355 38.6
THA.LOC104808737 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 7.4e-43 178.7 349 37.8
Carub.0007s2901 Capsella rubella HOM05D003874 ORTHO05D004545 1.6e-42 177.6 329 37.4
CDE02G0043 Ceratophyllum demersum HOM05D003874 ORTHO05D004545 8.2e-42 175.3 333 36.9
AT4G13530 Arabidopsis thaliana HOM05D003874 ORTHO05D004545 1.1e-41 174.9 338 37.0
MSTRG.24132 Avicennia marina HOM05D003874 ORTHO05D004545 1.4e-41 174.5 335 38.5
Lj7A419T39 Lonicera japonica HOM05D003874 ORTHO05D004545 1.5e-40 171.0 389 35.2
THA.LOC104821626 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 1.5e-40 171.0 340 36.2
HanXRQChr15g0484691 Helianthus annuus HOM05D003874 ORTHO05D004545 2.6e-40 170.2 325 37.8
EL10Ac1g01274 Beta vulgaris HOM05D003874 ORTHO05D004545 3.4e-40 169.9 329 40.4
ECA232G3741 Erigeron canadensis HOM05D003874 ORTHO05D004545 3.4e-40 169.9 338 35.8
GSVIVG01036285001 Vitis vinifera HOM05D003874 ORTHO05D004545 5.8e-40 169.1 126 65.1
MSTRG.22473 Avicennia marina HOM05D003874 ORTHO05D004545 1.3e-39 167.9 335 35.8
BcaC08g44301 Brassica carinata HOM05D003874 ORTHO05D004545 1.4e-38 164.5 335 37.0
C06p17230 Brassica napus HOM05D003874 ORTHO05D004545 1.9e-38 164.1 335 37.0
BolC6t36923H Brassica oleracea HOM05D003874 ORTHO05D004545 1.9e-38 164.1 335 37.0
PGSC0003DMG400008421 Solanum tuberosum HOM05D003874 ORTHO05D004545 5.5e-38 162.5 352 34.1
CARHR219160 Cardamine hirsuta HOM05D003874 ORTHO05D004545 9.3e-38 161.8 340 35.9
AL7G43110 Arabidopsis lyrata HOM05D003874 ORTHO05D004545 1.2e-37 161.4 336 34.2
Aqoxy5G01942 Aquilegia oxysepala HOM05D003874 ORTHO05D004545 2.7e-37 160.2 349 36.1
PGSC0003DMG400012413 Solanum tuberosum HOM05D003874 ORTHO05D004545 7.9e-37 158.7 334 37.4
Solyc07g063050.1 Solanum lycopersicum HOM05D003874 ORTHO05D004545 3.9e-36 156.4 333 36.9
A05p16560 Brassica napus HOM05D003874 ORTHO05D004545 8.7e-36 155.2 331 35.0
Sopen07g031240 Solanum pennellii HOM05D003874 ORTHO05D004545 1.1e-35 154.8 333 36.6
Ah.05g170390 Amaranthus hybridus HOM05D003874 ORTHO05D004545 2.8e-34 150.2 330 37.9
AUR62038535 Chenopodium quinoa HOM05D003874 ORTHO05D004545 2.8e-34 150.2 215 43.7
Thhalv10028826m.g Eutrema salsugineum HOM05D003874 ORTHO05D004545 1.1e-33 148.3 335 35.8
Sp7g11130 Schrenkiella parvula HOM05D003874 ORTHO05D004545 2.4e-33 147.1 302 36.1
AUR62013384 Chenopodium quinoa HOM05D003874 ORTHO05D004545 4.1e-33 146.4 222 44.1
THA.LOC104813368 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 5.3e-33 146.0 187 44.4
MELO3C008094.2 Cucumis melo HOM05D003874 ORTHO05D004545 6.9e-33 145.6 477 28.5
BraA05t20564Z Brassica rapa HOM05D003874 ORTHO05D004545 1.5e-32 144.4 329 33.4
DCAR_014068 Daucus carota HOM05D003874 ORTHO05D004545 3.4e-32 143.3 204 40.7
CAN.G761.11 Capsicum annuum HOM05D003874 ORTHO05D004545 4.5e-32 142.9 306 35.9
CAN.G761.10 Capsicum annuum HOM05D003874 ORTHO05D004545 5.9e-32 142.5 306 35.9
Sc21g0007200 Simmondsia chinensis HOM05D003874 ORTHO05D004545 1.3e-31 141.4 335 34.6
Hund16917 Selenicereus undatus HOM05D003874 ORTHO05D004545 6.5e-31 139.0 107 65.4
Aa31LG9G11920 Aethionema arabicum HOM05D003874 ORTHO05D004545 8.5e-31 138.7 376 33.2
THA.LOC104806752 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 1.4e-30 137.9 385 33.5
AL6G43860 Arabidopsis lyrata HOM05D003874 ORTHO05D004545 3.2e-30 136.7 274 38.3
Sp6g07450 Schrenkiella parvula HOM05D003874 ORTHO05D004545 9.4e-30 135.2 357 32.8
BcaB05g23922 Brassica carinata HOM05D003874 ORTHO05D004545 1.6e-29 134.4 337 32.9
Carub.0006s2864 Capsella rubella HOM05D003874 ORTHO05D004545 2.1e-29 134.0 169 45.6
BcaB01g01449 Brassica carinata HOM05D003874 ORTHO05D004545 1.0e-28 131.7 204 39.7
unitig_37.g13076 Utricularia gibba HOM05D003874 ORTHO05D004545 1.0e-28 131.7 145 49.7
A02p26740 Brassica napus HOM05D003874 ORTHO05D004545 5.1e-28 129.4 215 40.5
BraA02t07678Z Brassica rapa HOM05D003874 ORTHO05D004545 5.1e-28 129.4 215 40.5
BcaC03g16428 Brassica carinata HOM05D003874 ORTHO05D004545 6.7e-28 129.0 100 61.0
C02p42530 Brassica napus HOM05D003874 ORTHO05D004545 6.7e-28 129.0 100 61.0
BolC2t10292H Brassica oleracea HOM05D003874 ORTHO05D004545 6.7e-28 129.0 111 57.7
AT4G10080 Arabidopsis thaliana HOM05D003874 ORTHO05D004545 1.1e-27 128.3 335 33.7
CARHR261100 Cardamine hirsuta HOM05D003874 ORTHO05D004545 2.0e-27 127.5 367 32.4
MBI06_g14322_MAGBIO Magnolia biondii HOM05D003874 ORTHO05D004545 3.3e-27 126.7 151 48.3
A09p28850 Brassica napus HOM05D003874 ORTHO05D004545 4.3e-27 126.3 153 45.8
BraA09t38447Z Brassica rapa HOM05D003874 ORTHO05D004545 4.3e-27 126.3 153 45.8
Lalb_Chr15g0080071 Lupinus albus HOM05D003874 ORTHO05D004545 1.7e-26 124.4 104 62.5
CDE07G0664 Ceratophyllum demersum HOM05D003874 ORTHO05D004545 2.8e-26 123.6 180 39.4
arahy.Tifrunner.gnm1.ann1.GHV9B3 Arachis hypogaea HOM05D003874 ORTHO05D004545 1.1e-25 121.7 103 63.1
arahy.Tifrunner.gnm1.ann1.N113B0 Arachis hypogaea HOM05D003874 ORTHO05D004545 1.1e-25 121.7 103 63.1
Oeu046029.1 Olea europaea HOM05D003874 ORTHO05D004545 1.1e-25 121.7 94 58.5
Oeu013912.1 Olea europaea HOM05D003874 ORTHO05D004545 3.1e-25 120.2 454 26.0
Psat5g232160 Pisum sativum HOM05D003874 ORTHO05D004545 1.2e-24 118.2 126 54.0
TPR.G25536 Trifolium pratense HOM05D003874 ORTHO05D004545 2.0e-24 117.5 170 45.3
Ca_27532_v3 Cicer arietinum L. HOM05D003874 ORTHO05D004545 7.7e-24 115.5 106 62.3
Lj3g0022236 Lotus japonicus HOM05D003874 ORTHO05D004545 7.7e-24 115.5 107 56.1
BcaC04g21012 Brassica carinata HOM05D003874 ORTHO05D004545 1.1e-22 111.7 287 34.1
C09p36670 Brassica napus HOM05D003874 ORTHO05D004545 1.1e-22 111.7 287 34.1
BolC9t56498H Brassica oleracea HOM05D003874 ORTHO05D004545 1.1e-22 111.7 287 34.1
Zm00001eb182290 Zea mays HOM05D003874 ORTHO05D004545 1.1e-22 111.7 139 45.3
Glyma.06G323500 Glycine max HOM05D003874 ORTHO05D004545 2.5e-22 110.5 191 41.4
Medtr3g006350 Medicago truncatula HOM05D003874 ORTHO05D004545 3.2e-22 110.2 247 35.6
CSS0021765 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 4.2e-22 109.8 71 74.6
Os02g0558500 Oryza sativa ssp. japonica HOM05D003874 ORTHO05D004545 2.7e-21 107.1 96 47.9
VMungo1080G0642 Vigna mungo HOM05D003874 ORTHO05D004545 2.7e-21 107.1 180 40.6
HPP92_005639 Vanilla planifolia HOM05D000572 ORTHO05D000840 2.3e-20 104.0 333 28.8
Zm00001eb366050 Zea mays HOM05D003874 ORTHO05D004545 3.0e-20 103.6 164 34.8
Phvul.005G002800 Phaseolus vulgaris HOM05D003874 ORTHO05D004545 8.8e-20 102.1 174 42.0
Glyma.04G111000 Glycine max HOM05D003874 ORTHO05D004545 1.1e-19 101.7 108 52.8
Solyc11g040300.2 Solanum lycopersicum HOM05D003874 ORTHO05D004545 2.0e-19 100.9 71 66.2
BcaB05g25162 Brassica carinata HOM05D003874 ORTHO05D004545 2.6e-19 100.5 338 29.6
Sopen11g018310 Solanum pennellii HOM05D003874 ORTHO05D004545 2.6e-19 100.5 307 30.3
HPP92_009210 Vanilla planifolia HOM05D003874 ORTHO05D004545 5.0e-15 86.3 327 27.8
Zm00001eb145550 Zea mays HOM05D003874 ORTHO05D004545 8.5e-15 85.5 184 29.3
SEGI_28614 Sequoiadendron giganteum HOM05D003874 ORTHO05D004545 2.2e-10 70.9 155 32.9
CARHR261120 Cardamine hirsuta HOM05D003874 ORTHO05D004545 4.8e-10 69.7 231 29.4
Nn4g22326 Nelumbo nucifera HOM05D003874 ORTHO05D004545 3.1e-09 67.0 40 75.0
Sabra16G0296100 Salix brachista HOM05D003874 ORTHO05D004545 7.0e-09 65.9 105 38.1
Sabra16G0293600 Salix brachista HOM05D003874 ORTHO05D004545 1.6e-08 64.7 105 38.1
Sabra16G0294500 Salix brachista HOM05D003874 ORTHO05D004545 7.7e-08 62.4 105 37.1
Pp3c15_17300 Physcomitrium patens HOM05D001925 ORTHO05D004257 1.7e-07 61.2 100 36.0


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