Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G022690 Citrullus lanatus HOM05D008112 ORTHO05D010225 6.6e-64 247.3 131 100.0
MELO3C012251.2 Cucumis melo HOM05D008112 ORTHO05D010225 2.4e-26 122.5 107 68.2
CsaV3_5G034340 Cucumis sativus L. HOM05D008112 ORTHO05D010225 5.3e-21 104.8 99 65.7
Sed0024639 Sechium edule HOM05D008112 ORTHO05D010225 5.1e-16 88.2 101 57.4
TAR622G0251 Trochodendron aralioides HOM05D008112 ORTHO05D010225 2.9e-11 72.4 94 41.5
Manes.06G068400 Manihot esculenta HOM05D008112 ORTHO05D010225 2.5e-10 69.3 91 36.3
Manes.14G102600 Manihot esculenta HOM05D008112 ORTHO05D010225 4.2e-10 68.6 91 33.0
Thecc.02G230800 Theobroma cacao HOM05D008112 ORTHO05D010225 9.3e-10 67.4 70 47.1
Nn3g17844 Nelumbo nucifera HOM05D008112 ORTHO05D010225 1.2e-09 67.0 83 45.8
Prupe.1G311100 Prunus persica HOM05D008112 ORTHO05D010225 6.7e-08 61.2 83 43.4
Sed0023854 Sechium edule HOM05D008112 ORTHO05D010225 6.7e-08 61.2 93 55.9
TAR371G0405 Trochodendron aralioides HOM05D008112 ORTHO05D010225 1.5e-07 60.1 90 37.8
Gohir.D02G169900 Gossypium hirsutum HOM05D008112 ORTHO05D010225 1.9e-07 59.7 91 40.7
Gorai.005G190400 Gossypium raimondii HOM05D008112 ORTHO05D010225 3.3e-07 58.9 91 39.6
Gohir.A03G146800 Gossypium hirsutum HOM05D008112 ORTHO05D010225 5.7e-07 58.2 93 40.9
Atru.chr11.70 Acer truncatum HOM05D008112 ORTHO05D010225 7.4e-07 57.8 91 48.4
Cfa018594 Carpinus fangiana HOM05D008112 ORTHO05D010225 7.4e-07 57.8 94 38.3
TAR629G1885 Trochodendron aralioides HOM05D008112 ORTHO05D010225 1.3e-06 57.0 68 44.1
CiPaw.15G085200 Carya illinoinensis HOM05D008112 ORTHO05D010225 2.2e-06 56.2 86 39.5


User provided reference genes

Program Settings