Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 8.1e-293 1009.6 485 100.0
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 1.4e-249 865.9 487 86.0
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 1.2e-248 862.8 480 86.2
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 1.2e-222 776.5 492 76.6
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 1.3e-197 693.3 500 66.2
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 7.1e-196 687.6 501 65.3
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 1.0e-194 683.7 494 66.2
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 1.7e-194 682.9 494 65.8
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 3.0e-194 682.2 501 66.5
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 6.4e-189 664.5 496 65.3
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 1.6e-187 659.8 472 66.3
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 1.6e-187 659.8 484 66.3
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 2.1e-187 659.4 400 74.2
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 1.0e-186 657.1 476 66.6
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.3e-186 656.8 500 62.2
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 1.3e-186 656.8 472 65.3
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 3.9e-186 655.2 484 63.4
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.5e-185 653.3 500 62.2
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.5e-185 653.3 502 62.0
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 1.5e-185 653.3 477 65.4
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.9e-185 652.9 500 61.8
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 1.9e-185 652.9 469 67.2
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 1.9e-185 652.9 481 65.7
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 2.5e-185 652.5 497 63.0
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 2.5e-185 652.5 502 62.0
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.3e-185 651.7 500 62.0
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.6e-185 651.4 500 61.8
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.6e-185 651.4 500 62.0
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 7.3e-185 651.0 500 62.0
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.6e-184 649.8 500 61.8
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.6e-184 649.8 500 61.6
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 1.4e-183 646.7 465 66.7
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.8e-183 646.4 500 61.4
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.4e-183 646.0 500 61.4
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 2.4e-183 646.0 484 64.9
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 6.9e-183 644.4 472 65.0
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 6.9e-183 644.4 480 64.2
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.2e-182 643.7 500 61.4
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 7.6e-182 641.0 489 62.4
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 2.2e-181 639.4 470 65.5
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 2.4e-180 636.0 473 64.1
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 2.4e-180 636.0 500 61.2
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 9.3e-180 634.0 480 62.3
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 1.3e-178 630.2 401 69.3
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 1.3e-178 630.2 398 71.9
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 3.0e-178 629.0 488 62.1
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 1.9e-177 626.3 473 62.8
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 4.3e-177 625.2 497 61.0
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 4.3e-177 625.2 401 70.8
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 2.8e-176 622.5 397 70.8
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 1.4e-175 620.2 473 62.8
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 3.1e-175 619.0 480 62.7
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 3.1e-175 619.0 471 62.8
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 3.1e-175 619.0 470 62.8
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 5.3e-175 618.2 409 68.7
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 1.5e-174 616.7 464 63.4
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 1.5e-174 616.7 397 71.3
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 2.0e-174 616.3 402 70.1
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 7.6e-174 614.4 473 63.0
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 9.9e-174 614.0 465 63.4
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 1.1e-172 610.5 390 72.8
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 1.2e-171 607.1 411 66.2
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 1.6e-171 606.7 398 68.3
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 7.9e-171 604.4 397 69.5
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 3.9e-170 602.1 497 59.0
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 6.7e-170 601.3 359 73.0
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 1.5e-169 600.1 471 59.7
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 1.6e-168 596.7 402 68.4
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 2.1e-168 596.3 501 57.5
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 1.1e-167 594.0 404 68.3
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 3.1e-167 592.4 400 68.2
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 1.2e-166 590.5 402 68.2
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 3.4e-166 589.0 371 72.8
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 7.6e-166 587.8 397 68.3
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 1.1e-164 583.9 484 60.1
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 5.1e-162 575.1 369 69.9
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 8.2e-160 567.8 401 65.6
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 1.2e-158 563.9 402 63.9
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 2.0e-158 563.1 469 57.4
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 2.2e-157 559.7 454 59.9
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 1.1e-156 557.4 400 63.2
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 6.7e-154 548.1 374 65.5
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 2.5e-153 546.2 497 54.1
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 3.7e-152 542.3 390 64.1
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 3.7e-152 542.3 357 67.2
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 1.2e-150 537.3 456 59.4
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 5.9e-150 535.0 466 57.5
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 3.8e-149 532.3 406 61.6
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 7.2e-148 528.1 355 68.7
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 1.3e-146 523.9 349 69.1
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 2.4e-143 513.1 409 58.7
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 4.7e-131 472.2 402 55.2
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 1.1e-127 461.1 386 58.0
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 9.1e-127 458.0 294 73.5
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 2.7e-118 429.9 446 52.2
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 2.5e-116 423.3 353 58.9
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 3.3e-100 369.8 404 46.8
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 5.8e-97 359.0 297 59.6
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 1.6e-86 324.3 431 41.5
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 2.1e-83 313.9 206 70.4
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 6.8e-82 308.9 441 40.8
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 9.6e-68 261.9 450 36.7
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 3.1e-66 256.9 400 38.5
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 5.8e-65 252.7 162 69.8
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 5.4e-63 246.1 302 42.7
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 3.3e-44 183.7 206 47.6
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 3.8e-40 170.2 375 30.7
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 5.7e-28 129.8 89 69.7
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 1.2e-25 122.1 323 30.7
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 2.2e-19 101.3 296 29.1
MBI01_g04536_MAGBIO Magnolia biondii HOM05D007060 ORTHO05D009087 8.5e-16 89.4 67 62.7
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 3.6e-14 84.0 59 62.7
CBR_g29367 Chara braunii HOM05D007060 ORTHO05D009087 2.8e-11 74.3 83 48.2


User provided reference genes

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