Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G021770 Citrullus lanatus HOM05D007318 ORTHO05D009289 2.6e-32 141.4 67 100.0
ClCG05G018410 Citrullus lanatus HOM05D007318 ORTHO05D009289 4.9e-15 84.0 39 97.4
CsaV3_5G035390 Cucumis sativus L. HOM05D007318 ORTHO05D009289 2.1e-13 78.6 39 89.7
MELO3C012351.2 Cucumis melo HOM05D007318 ORTHO05D009289 1.3e-12 75.9 39 87.2
Sed0005914 Sechium edule HOM05D007318 ORTHO05D009289 5.1e-12 73.9 39 84.6
MD02G1257000 Malus domestica HOM05D007318 ORTHO05D009289 1.9e-11 72.0 39 82.1
CiPaw.14G032900 Carya illinoinensis HOM05D007318 ORTHO05D009289 2.5e-11 71.6 39 79.5
Sabra10G0186800 Salix brachista HOM05D007318 ORTHO05D009289 1.3e-10 69.3 39 71.8
Nitab4.5_0001437g0020 Nicotiana tabacum HOM05D007318 ORTHO05D009289 1.6e-10 68.9 39 74.4
Atru.chr12.1022 Acer truncatum HOM05D007318 ORTHO05D009289 2.1e-10 68.6 39 71.8
Potri.010G238500 Populus trichocarpa HOM05D007318 ORTHO05D009289 2.8e-10 68.2 39 71.8
Nitab4.5_0011538g0040 Nicotiana tabacum HOM05D007318 ORTHO05D009289 3.7e-10 67.8 39 71.8
PGR044G0176 Punica granatum HOM05D007318 ORTHO05D009289 6.2e-10 67.0 39 71.8
Ciclev10016201m.g Citrus clementina HOM05D007318 ORTHO05D009289 8.2e-10 66.6 39 69.2
GSVIVG01001002001 Vitis vinifera HOM05D007318 ORTHO05D009289 1.1e-09 66.2 39 71.8
CSS0042589 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 1.4e-09 65.9 39 66.7
TWI63G0749 Tripterygium wilfordii HOM05D007318 ORTHO05D009289 1.4e-09 65.9 39 71.8
Lj6g0015884 Lotus japonicus HOM05D007318 ORTHO05D009289 1.8e-09 65.5 39 69.2
CSS0001089 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 3.1e-09 64.7 39 64.1
Manes.03G085100 Manihot esculenta HOM05D007318 ORTHO05D009289 3.1e-09 64.7 39 71.8
AUR62043602 Chenopodium quinoa HOM05D007318 ORTHO05D009289 4.0e-09 64.3 39 66.7
Actinidia18618 Actinidia chinensis HOM05D007318 ORTHO05D009289 5.3e-09 63.9 37 67.6
Haze_02511 Corylus avellana HOM05D007318 ORTHO05D009289 5.3e-09 63.9 39 66.7
Oeu026589.2 Olea europaea HOM05D007318 ORTHO05D009289 6.9e-09 63.5 39 69.2
EL10Ac4g08684 Beta vulgaris HOM05D007318 ORTHO05D009289 9.0e-09 63.2 39 69.2
COL.COLO4_33011 Corchorus olitorius HOM05D007318 ORTHO05D009289 9.0e-09 63.2 39 69.2
Duzib151G0977 Durio zibethinus HOM05D007318 ORTHO05D009289 1.5e-08 62.4 39 69.2
Solyc11g006930.3 Solanum lycopersicum HOM05D007318 ORTHO05D009289 1.5e-08 62.4 39 66.7
PGSC0003DMG400023973 Solanum tuberosum HOM05D007318 ORTHO05D009289 1.5e-08 62.4 39 66.7
SGA_v2.0_scaffold13G06456 Striga asiatica HOM05D007318 ORTHO05D009289 2.0e-08 62.0 39 66.7
Sopen11g002850 Solanum pennellii HOM05D007318 ORTHO05D009289 2.6e-08 61.6 39 66.7
Thecc.03G070600 Theobroma cacao HOM05D007318 ORTHO05D009289 2.6e-08 61.6 39 69.2
CAN.G645.12 Capsicum annuum HOM05D007318 ORTHO05D009289 3.4e-08 61.2 39 66.7
Gorai.005G019900 Gossypium raimondii HOM05D007318 ORTHO05D009289 4.5e-08 60.8 39 69.2
Ca_20265_v3 Cicer arietinum L. HOM05D007318 ORTHO05D009289 7.6e-08 60.1 39 64.1
ECA238G4459 Erigeron canadensis HOM05D007318 ORTHO05D009289 7.6e-08 60.1 39 64.1
SalBow6G3105 Salvia bowleyana HOM05D007318 ORTHO05D009289 7.6e-08 60.1 39 64.1
Cc02_g09660 Coffea canephora HOM05D007318 ORTHO05D009289 1.0e-07 59.7 39 61.5
Glyma.15G117500 Glycine max HOM05D007318 ORTHO05D009289 1.3e-07 59.3 39 64.1
Gohir.D02G016400 Gossypium hirsutum HOM05D007318 ORTHO05D009289 1.3e-07 59.3 39 66.7
Lj2A32G32 Lonicera japonica HOM05D007318 ORTHO05D009289 1.3e-07 59.3 39 59.0
MBI13_g32993_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 1.3e-07 59.3 39 64.1
QL04p044887 Quercus lobata HOM05D007318 ORTHO05D009289 1.3e-07 59.3 39 61.5
TAR636G1683 Trochodendron aralioides HOM05D007318 ORTHO05D009289 1.3e-07 59.3 39 64.1
Dinv09616 Davidia involucrata HOM05D007318 ORTHO05D009289 1.7e-07 58.9 39 59.0
Medtr1g050425 Medicago truncatula HOM05D007318 ORTHO05D009289 1.7e-07 58.9 39 61.5
Eucgr.J00256 Eucalyptus grandis HOM05D007318 ORTHO05D009289 2.2e-07 58.5 39 61.5
PSO384G0062 Papaver somniferum HOM05D007318 ORTHO05D009289 2.2e-07 58.5 39 59.0
Psat2g020440 Pisum sativum HOM05D007318 ORTHO05D009289 2.9e-07 58.2 39 61.5
Hund22276 Selenicereus undatus HOM05D007318 ORTHO05D009289 2.9e-07 58.2 39 64.1
Lsat_1_v5_gn_2_104460 Lactuca sativa HOM05D007318 ORTHO05D009289 3.8e-07 57.8 39 56.4
Lalb_Chr01g0010421 Lupinus albus HOM05D007318 ORTHO05D009289 3.8e-07 57.8 38 63.2
Rhsim03G0098000 Rhododendron simsii HOM05D007318 ORTHO05D009289 3.8e-07 57.8 37 59.5
TPR.G10614 Trifolium pratense HOM05D007318 ORTHO05D009289 3.8e-07 57.8 39 64.1
MSTRG.421 Avicennia marina HOM05D007318 ORTHO05D009289 6.5e-07 57.0 39 61.5
DCAR_018980 Daucus carota HOM05D007318 ORTHO05D009289 6.5e-07 57.0 39 64.1
Glyma.02G164100 Glycine max HOM05D007318 ORTHO05D009289 6.5e-07 57.0 39 61.5
unitig_0.g1560 Utricularia gibba HOM05D007318 ORTHO05D009289 6.5e-07 57.0 38 63.2
Peaxi162Scf00173g00322 Petunia axillaris HOM05D007318 ORTHO05D009289 8.4e-07 56.6 38 60.5
VMungo0720G2068 Vigna mungo HOM05D007318 ORTHO05D009289 8.4e-07 56.6 39 59.0
arahy.Tifrunner.gnm1.ann1.CJJ3HV Arachis hypogaea HOM05D007318 ORTHO05D009289 1.1e-06 56.2 39 59.0
arahy.Tifrunner.gnm1.ann1.CYVU5X Arachis hypogaea HOM05D007318 ORTHO05D009289 1.1e-06 56.2 39 59.0
arahy.Tifrunner.gnm1.ann1.PPG341 Arachis hypogaea HOM05D007318 ORTHO05D009289 1.1e-06 56.2 39 59.0
Phvul.007G242433 Phaseolus vulgaris HOM05D007318 ORTHO05D009289 1.1e-06 56.2 39 59.0
Aqoxy1G02117 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 1.4e-06 55.8 38 60.5
HanXRQChr07g0194021 Helianthus annuus HOM05D007318 ORTHO05D009289 1.4e-06 55.8 39 59.0
Psat6g095000 Pisum sativum HOM05D007318 ORTHO05D009289 2.5e-06 55.1 39 59.0
CANSAT56G0802 Cannabis sativa HOM05D007318 ORTHO05D009289 4.2e-06 54.3 30 73.3
Nn7g37225 Nelumbo nucifera HOM05D007318 ORTHO05D009289 4.2e-06 54.3 39 59.0


User provided reference genes

Program Settings