Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G018410 Citrullus lanatus HOM05D007318 ORTHO05D009289 1.2e-160 569.7 281 100.0
CsaV3_5G035390 Cucumis sativus L. HOM05D007318 ORTHO05D009289 8.2e-120 434.1 277 79.8
Sed0005914 Sechium edule HOM05D007318 ORTHO05D009289 1.9e-113 412.9 274 76.6
MELO3C012351.2 Cucumis melo HOM05D007318 ORTHO05D009289 8.2e-112 407.5 290 74.5
Ciclev10016201m.g Citrus clementina HOM05D007318 ORTHO05D009289 5.2e-90 335.1 276 60.1
MD02G1257000 Malus domestica HOM05D007318 ORTHO05D009289 2.2e-88 329.7 273 59.7
Atru.chr12.1022 Acer truncatum HOM05D007318 ORTHO05D009289 6.3e-88 328.2 273 59.0
Haze_02511 Corylus avellana HOM05D007318 ORTHO05D009289 2.4e-87 326.2 273 59.0
QL04p044887 Quercus lobata HOM05D007318 ORTHO05D009289 3.1e-87 325.9 273 59.3
Sabra10G0186800 Salix brachista HOM05D007318 ORTHO05D009289 4.1e-87 325.5 274 57.7
CiPaw.14G032900 Carya illinoinensis HOM05D007318 ORTHO05D009289 1.0e-85 320.9 271 58.7
Dinv09616 Davidia involucrata HOM05D007318 ORTHO05D009289 1.7e-85 320.1 274 57.7
Actinidia18618 Actinidia chinensis HOM05D007318 ORTHO05D009289 3.2e-84 315.8 272 55.9
Eucgr.J00256 Eucalyptus grandis HOM05D007318 ORTHO05D009289 3.2e-84 315.8 273 57.1
Oeu026589.2 Olea europaea HOM05D007318 ORTHO05D009289 4.2e-84 315.5 273 56.8
TWI63G0749 Tripterygium wilfordii HOM05D007318 ORTHO05D009289 1.6e-83 313.5 274 58.4
Nitab4.5_0011538g0040 Nicotiana tabacum HOM05D007318 ORTHO05D009289 2.7e-83 312.8 271 56.5
CSS0001089 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 3.6e-83 312.4 274 56.2
CSS0042589 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 4.7e-83 312.0 274 56.6
Lj6g0015884 Lotus japonicus HOM05D007318 ORTHO05D009289 1.0e-82 310.8 273 54.2
Rhsim03G0098000 Rhododendron simsii HOM05D007318 ORTHO05D009289 2.3e-82 309.7 274 56.2
Duzib151G0977 Durio zibethinus HOM05D007318 ORTHO05D009289 4.0e-82 308.9 273 55.3
GSVIVG01001002001 Vitis vinifera HOM05D007318 ORTHO05D009289 4.0e-82 308.9 273 57.1
Nitab4.5_0001437g0020 Nicotiana tabacum HOM05D007318 ORTHO05D009289 6.7e-82 308.1 276 54.7
RcHm_v2.0_Chr1g0332361 Rosa chinensis HOM05D007318 ORTHO05D009289 2.6e-81 306.2 270 55.2
Manes.03G085100 Manihot esculenta HOM05D007318 ORTHO05D009289 4.4e-81 305.4 273 54.9
CANSAT56G0802 Cannabis sativa HOM05D007318 ORTHO05D009289 5.7e-81 305.1 293 52.9
ClCG05G021760 Citrullus lanatus HOM05D007318 ORTHO05D009289 7.5e-81 304.7 179 83.2
Lalb_Chr01g0010421 Lupinus albus HOM05D007318 ORTHO05D009289 9.7e-81 304.3 272 54.0
CAN.G645.12 Capsicum annuum HOM05D007318 ORTHO05D009289 1.7e-80 303.5 270 54.8
Glyma.15G117500 Glycine max HOM05D007318 ORTHO05D009289 1.7e-80 303.5 274 55.5
COL.COLO4_33011 Corchorus olitorius HOM05D007318 ORTHO05D009289 6.3e-80 301.6 273 54.9
DCAR_018980 Daucus carota HOM05D007318 ORTHO05D009289 6.3e-80 301.6 276 54.0
SalBow6G3105 Salvia bowleyana HOM05D007318 ORTHO05D009289 4.1e-79 298.9 271 55.0
Sopen11g002850 Solanum pennellii HOM05D007318 ORTHO05D009289 9.1e-79 297.7 277 53.4
VMungo0720G2068 Vigna mungo HOM05D007318 ORTHO05D009289 9.1e-79 297.7 272 53.7
Phvul.007G242433 Phaseolus vulgaris HOM05D007318 ORTHO05D009289 1.2e-78 297.4 273 54.2
Gorai.005G019900 Gossypium raimondii HOM05D007318 ORTHO05D009289 1.6e-78 297.0 273 53.1
Gohir.D02G016400 Gossypium hirsutum HOM05D007318 ORTHO05D009289 2.0e-78 296.6 273 53.1
Nn7g37225 Nelumbo nucifera HOM05D007318 ORTHO05D009289 7.7e-78 294.7 274 54.4
MBI13_g32993_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 1.0e-77 294.3 277 53.4
FAN01G1304 Fragaria x ananassa HOM05D007318 ORTHO05D009289 1.1e-76 290.8 268 53.4
Peaxi162Scf00173g00322 Petunia axillaris HOM05D007318 ORTHO05D009289 1.9e-76 290.0 262 54.6
FAN06G3353 Fragaria x ananassa HOM05D007318 ORTHO05D009289 2.5e-76 289.7 268 53.0
Migut.F01608 Erythranthe guttata HOM05D007318 ORTHO05D009289 7.2e-76 288.1 271 51.7
FvH4_7g05530 Fragaria vesca HOM05D007318 ORTHO05D009289 7.2e-76 288.1 268 53.0
Prupe.2G075500 Prunus persica HOM05D007318 ORTHO05D009289 1.2e-75 287.3 229 61.1
ECA238G4459 Erigeron canadensis HOM05D007318 ORTHO05D009289 2.1e-75 286.6 273 52.7
arahy.Tifrunner.gnm1.ann1.PPG341 Arachis hypogaea HOM05D007318 ORTHO05D009289 6.1e-75 285.0 289 51.2
Hund22276 Selenicereus undatus HOM05D007318 ORTHO05D009289 1.4e-74 283.9 272 51.1
Cc02_g09660 Coffea canephora HOM05D007318 ORTHO05D009289 2.3e-74 283.1 275 50.2
arahy.Tifrunner.gnm1.ann1.CJJ3HV Arachis hypogaea HOM05D007318 ORTHO05D009289 3.0e-74 282.7 271 53.1
arahy.Tifrunner.gnm1.ann1.CYVU5X Arachis hypogaea HOM05D007318 ORTHO05D009289 3.0e-74 282.7 271 53.1
HanXRQChr07g0194021 Helianthus annuus HOM05D007318 ORTHO05D009289 4.0e-74 282.3 273 51.6
TPR.G10614 Trifolium pratense HOM05D007318 ORTHO05D009289 8.3e-72 274.6 279 51.6
Ca_20265_v3 Cicer arietinum L. HOM05D007318 ORTHO05D009289 4.5e-70 268.9 284 48.6
Lsat_1_v5_gn_2_104460 Lactuca sativa HOM05D007318 ORTHO05D009289 4.5e-70 268.9 279 49.5
Medtr1g050425 Medicago truncatula HOM05D007318 ORTHO05D009289 2.3e-69 266.5 304 45.7
MBI13_g44214_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 8.6e-69 264.6 267 51.3
Potri.010G238500 Populus trichocarpa HOM05D007318 ORTHO05D009289 2.5e-68 263.1 224 58.0
SGA_v2.0_scaffold13G06456 Striga asiatica HOM05D007318 ORTHO05D009289 5.5e-68 261.9 271 49.8
PGR044G0176 Punica granatum HOM05D007318 ORTHO05D009289 6.1e-67 258.5 222 56.3
Aqoxy1G02117 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 2.3e-66 256.5 276 48.2
EL10Ac4g08684 Beta vulgaris HOM05D007318 ORTHO05D009289 4.0e-66 255.8 271 46.9
Cpa.g.sc5.264 Carica papaya HOM05D007318 ORTHO05D009289 4.0e-66 255.8 231 52.4
unitig_0.g1560 Utricularia gibba HOM05D007318 ORTHO05D009289 5.2e-66 255.4 272 47.4
PSO384G0062 Papaver somniferum HOM05D007318 ORTHO05D009289 8.9e-66 254.6 279 48.4
Psat2g020440 Pisum sativum HOM05D007318 ORTHO05D009289 1.2e-65 254.2 316 44.0
Lj2A32G32 Lonicera japonica HOM05D007318 ORTHO05D009289 4.9e-64 248.8 275 47.6
Solyc11g006930.3 Solanum lycopersicum HOM05D007318 ORTHO05D009289 6.3e-64 248.4 225 56.0
Aqoxy1G02095 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 2.4e-63 246.5 288 45.1
Zm00001eb196200 Zea mays HOM05D007318 ORTHO05D009289 1.1e-60 237.7 269 46.1
Os11g0136500 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 2.3e-58 229.9 267 43.8
ATR1096G030 Amborella trichopoda HOM05D007318 ORTHO05D009289 3.0e-58 229.6 226 49.6
ClCG00G005260 Citrullus lanatus HOM05D007318 ORTHO05D009289 2.9e-56 223.0 135 80.0
TAR636G1683 Trochodendron aralioides HOM05D007318 ORTHO05D009289 9.2e-55 218.0 159 67.9
Os12g0133400 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 1.6e-54 217.2 267 41.6
Cfa011269 Carpinus fangiana HOM05D007318 ORTHO05D009289 2.0e-54 216.9 195 54.9
Thecc.03G070600 Theobroma cacao HOM05D007318 ORTHO05D009289 2.3e-53 213.4 159 64.2
Glyma.02G164100 Glycine max HOM05D007318 ORTHO05D009289 3.9e-53 212.6 159 63.5
MSTRG.421 Avicennia marina HOM05D007318 ORTHO05D009289 1.1e-52 211.1 155 64.5
AUR62043602 Chenopodium quinoa HOM05D007318 ORTHO05D009289 1.5e-49 200.7 328 37.2
HPP92_018209 Vanilla planifolia HOM05D007318 ORTHO05D009289 5.8e-49 198.7 271 39.5
Mapoly0020s0170 Marchantia polymorpha HOM05D007318 ORTHO05D009289 7.8e-46 188.3 276 38.8
AagrBONN_evm.TU.Sc2ySwM_368.1913 Anthoceros agrestis HOM05D007318 ORTHO05D009289 1.7e-45 187.2 276 37.0
Psat6g095000 Pisum sativum HOM05D007318 ORTHO05D009289 2.5e-44 183.3 258 39.9
AUR62042079 Chenopodium quinoa HOM05D007318 ORTHO05D009289 1.9e-39 167.2 186 45.7
SMO172G0015 Selaginella moellendorffii HOM05D007318 ORTHO05D009289 1.4e-34 151.0 247 34.8
Lsat_1_v5_gn_5_177140 Lactuca sativa HOM05D007318 ORTHO05D009289 1.7e-32 144.1 148 52.7
SEGI_17929 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 1.4e-31 141.0 143 50.3
PRCOL_00002097 Prasinoderma coloniale HOM05D007318 ORTHO05D009289 4.1e-31 139.4 279 31.5
Pp3c5_16220 Physcomitrium patens HOM05D007318 ORTHO05D009289 3.5e-30 136.3 229 35.8
MBI13_g43865_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 1.4e-23 114.4 110 50.9
PGSC0003DMG400023973 Solanum tuberosum HOM05D007318 ORTHO05D009289 4.2e-23 112.8 83 65.1
Gohir.A02G015000 Gossypium hirsutum HOM05D007318 ORTHO05D009289 1.6e-22 110.9 151 37.1
Dinv09612 Davidia involucrata HOM05D007318 ORTHO05D009289 3.0e-21 106.7 128 48.4
MCO07G233 Micromonas commoda HOM05D007318 ORTHO05D009289 9.6e-20 101.7 309 29.1
ClCG05G021770 Citrullus lanatus HOM05D007318 ORTHO05D009289 6.0e-14 82.4 39 97.4
Cre07.g323750 Chlamydomonas reinhardtii HOM05D007318 ORTHO05D009289 1.4e-10 71.2 141 34.0
Glyma.20G074100 Glycine max HOM05D007318 ORTHO05D009289 4.0e-10 69.7 78 44.9
SEGI_12071 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 4.5e-09 66.2 126 30.2
TAR636G1493 Trochodendron aralioides HOM05D007318 ORTHO05D009289 9.9e-09 65.1 52 55.8
Lj6g0000477 Lotus japonicus HOM05D007318 ORTHO05D009289 1.1e-07 61.6 101 36.6


User provided reference genes

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