Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G017630 Citrullus lanatus HOM05D008077 ORTHO05D010221 1.5e-119 433.0 226 100.0
CsaV3_4G035360 Cucumis sativus L. HOM05D008077 ORTHO05D010221 6.2e-102 374.4 226 86.7
Sed0028055 Sechium edule HOM05D008077 ORTHO05D010221 6.9e-69 264.6 227 66.1
MELO3C016846.2 Cucumis melo HOM05D008077 ORTHO05D010221 2.7e-65 252.7 155 87.7
TWI56G0834 Tripterygium wilfordii HOM05D008077 ORTHO05D010221 1.0e-48 197.6 228 47.4
Cfa013722 Carpinus fangiana HOM05D008077 ORTHO05D010221 2.2e-46 189.9 211 48.8
Haze_22366 Corylus avellana HOM05D008077 ORTHO05D010221 1.1e-45 187.6 211 47.4
QL09p016211 Quercus lobata HOM05D008077 ORTHO05D010221 6.9e-45 184.9 213 49.3
Thecc.08G082700 Theobroma cacao HOM05D008077 ORTHO05D010221 2.2e-43 179.9 206 48.5
CiPaw.08G053400 Carya illinoinensis HOM05D008077 ORTHO05D010221 2.9e-43 179.5 166 52.4
Atru.chr13.887 Acer truncatum HOM05D008077 ORTHO05D010221 5.0e-43 178.7 214 46.3
Dinv39194 Davidia involucrata HOM05D008077 ORTHO05D010221 1.4e-42 177.2 233 44.2
Hma1.2p1_4204F.1_g338450 Hydrangea macrophylla HOM05D008077 ORTHO05D010221 7.2e-42 174.9 216 47.2
RcHm_v2.0_Chr6g0310221 Rosa chinensis HOM05D008077 ORTHO05D010221 1.2e-41 174.1 230 46.5
GSVIVG01009281001 Vitis vinifera HOM05D008077 ORTHO05D010221 2.7e-41 172.9 227 42.7
TAR376G0563 Trochodendron aralioides HOM05D008077 ORTHO05D010221 3.6e-41 172.6 168 48.2
Phvul.001G032000 Phaseolus vulgaris HOM05D008077 ORTHO05D010221 3.0e-40 169.5 229 44.5
Duzib116G0694 Durio zibethinus HOM05D008077 ORTHO05D010221 5.1e-40 168.7 212 47.6
Dinv44921 Davidia involucrata HOM05D008077 ORTHO05D010221 1.5e-39 167.2 221 45.7
Lalb_Chr14g0367971 Lupinus albus HOM05D008077 ORTHO05D010221 1.5e-39 167.2 220 42.3
Nn6g34549 Nelumbo nucifera HOM05D008077 ORTHO05D010221 1.5e-39 167.2 184 47.8
Eucgr.F02208 Eucalyptus grandis HOM05D008077 ORTHO05D010221 2.5e-39 166.4 216 44.9
Manes.18G051200 Manihot esculenta HOM05D008077 ORTHO05D010221 2.5e-39 166.4 215 44.2
Prupe.1G417600 Prunus persica HOM05D008077 ORTHO05D010221 4.3e-39 165.6 220 45.5
Ca_06992_v3 Cicer arietinum L. HOM05D008077 ORTHO05D010221 7.4e-39 164.9 221 41.2
Gohir.D01G112200 Gossypium hirsutum HOM05D008077 ORTHO05D010221 9.7e-39 164.5 197 44.2
Gohir.A01G124500 Gossypium hirsutum HOM05D008077 ORTHO05D010221 1.3e-38 164.1 198 44.9
Glyma.17G232225 Glycine max HOM05D008077 ORTHO05D010221 2.8e-38 162.9 219 44.7
Potri.005G149500 Populus trichocarpa HOM05D008077 ORTHO05D010221 3.7e-38 162.5 225 42.2
FAN24G1375 Fragaria x ananassa HOM05D008077 ORTHO05D010221 4.8e-38 162.2 213 46.5
arahy.Tifrunner.gnm1.ann1.PWM57A Arachis hypogaea HOM05D008077 ORTHO05D010221 6.3e-38 161.8 222 42.8
Gorai.002G137100 Gossypium raimondii HOM05D008077 ORTHO05D010221 6.3e-38 161.8 197 43.7
CSS0006446 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 1.4e-37 160.6 214 43.0
VMungo0647G0255 Vigna mungo HOM05D008077 ORTHO05D010221 1.4e-37 160.6 230 43.0
arahy.Tifrunner.gnm1.ann1.JS0EE0 Arachis hypogaea HOM05D008077 ORTHO05D010221 3.1e-37 159.5 222 41.4
PSO541G6554 Papaver somniferum HOM05D008077 ORTHO05D010221 3.1e-37 159.5 210 42.4
FvH4_2g32450 Fragaria vesca HOM05D008077 ORTHO05D010221 6.9e-37 158.3 213 45.5
Actinidia10235 Actinidia chinensis HOM05D008077 ORTHO05D010221 9.1e-37 157.9 210 41.9
FAN20G1346 Fragaria x ananassa HOM05D008077 ORTHO05D010221 9.1e-37 157.9 213 46.0
CSS0048473 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 1.2e-36 157.5 164 48.8
CANSAT25G0587 Cannabis sativa HOM05D008077 ORTHO05D010221 2.6e-36 156.4 224 41.1
Medtr1g017160 Medicago truncatula HOM05D008077 ORTHO05D010221 3.4e-36 156.0 212 42.0
Glyma.14G090800 Glycine max HOM05D008077 ORTHO05D010221 4.5e-36 155.6 220 42.3
Actinidia19284 Actinidia chinensis HOM05D008077 ORTHO05D010221 5.9e-36 155.2 221 40.7
MD08G1076300 Malus domestica HOM05D008077 ORTHO05D010221 1.9e-34 150.2 213 42.7
TPR.G13063 Trifolium pratense HOM05D008077 ORTHO05D010221 1.9e-34 150.2 223 40.4
FAN15G0649 Fragaria x ananassa HOM05D008077 ORTHO05D010221 5.5e-34 148.7 213 44.6
FAN27G3028 Fragaria x ananassa HOM05D008077 ORTHO05D010221 5.5e-34 148.7 212 45.3
Psat6g018560 Pisum sativum HOM05D008077 ORTHO05D010221 3.6e-33 146.0 157 46.5
Sabra05G0118800 Salix brachista HOM05D008077 ORTHO05D010221 4.7e-33 145.6 168 44.0
MSTRG.22201 Avicennia marina HOM05D008077 ORTHO05D010221 3.9e-32 142.5 182 42.3
EL10Ac1g02339 Beta vulgaris HOM05D008077 ORTHO05D010221 3.9e-32 142.5 210 37.6
PGR031G0263 Punica granatum HOM05D008077 ORTHO05D010221 6.7e-32 141.7 215 40.5
MBI16_g09811_MAGBIO Magnolia biondii HOM05D008077 ORTHO05D010221 8.8e-32 141.4 200 39.0
Oeu048561.1 Olea europaea HOM05D008077 ORTHO05D010221 2.0e-31 140.2 141 50.4
PSO675G3170 Papaver somniferum HOM05D008077 ORTHO05D010221 2.0e-31 140.2 212 38.7
Sc02g0008240 Simmondsia chinensis HOM05D008077 ORTHO05D010221 2.6e-31 139.8 139 43.9
AUR62034975 Chenopodium quinoa HOM05D008077 ORTHO05D010221 9.7e-31 137.9 166 42.2
AUR62039341 Chenopodium quinoa HOM05D008077 ORTHO05D010221 1.3e-30 137.5 161 44.1
Cc10_g07800 Coffea canephora HOM05D008077 ORTHO05D010221 4.8e-30 135.6 157 44.6
Ciclev10002390m.g Citrus clementina HOM05D008077 ORTHO05D010221 3.1e-29 132.9 208 39.9
CDE06G2465 Ceratophyllum demersum HOM05D008077 ORTHO05D010221 4.1e-29 132.5 176 40.3
THA.LOC104806984 Tarenaya hassleriana HOM05D008077 ORTHO05D010221 4.2e-26 122.5 223 35.4
Hund05263 Selenicereus undatus HOM05D008077 ORTHO05D010221 4.7e-25 119.0 211 37.4
Migut.N02805 Erythranthe guttata HOM05D008077 ORTHO05D010221 1.1e-23 114.4 144 42.4
COL.COLO4_28429 Corchorus olitorius HOM05D008077 ORTHO05D010221 1.7e-22 110.5 125 46.4
Lj5g0022198 Lotus japonicus HOM05D008077 ORTHO05D010221 3.1e-21 106.3 158 40.5
unitig_578.g16165 Utricularia gibba HOM05D008077 ORTHO05D010221 3.8e-19 99.4 89 53.9
HPP92_006033 Vanilla planifolia HOM05D008077 ORTHO05D010221 3.2e-18 96.3 186 31.2
TPR.G13160 Trifolium pratense HOM05D008077 ORTHO05D010221 1.4e-16 90.9 223 32.3
ATR0767G176 Amborella trichopoda HOM05D007054 ORTHO05D008888 9.1e-13 78.2 184 30.4
SEGI_41084 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 3.5e-12 76.3 147 34.0
AagrBONN_evm.TU.Sc2ySwM_344.1640 Anthoceros agrestis HOM05D007054 ORTHO05D008888 7.7e-12 75.1 135 32.6
SGA_v2.0_scaffold152G36867 Striga asiatica HOM05D008077 ORTHO05D010221 1.0e-11 74.7 87 47.1
Aqoxy2G00166 Aquilegia oxysepala HOM05D007054 ORTHO05D008888 1.5e-10 70.9 152 27.6
Pp3c23_6910 Physcomitrium patens HOM05D007054 ORTHO05D008888 4.2e-10 69.3 161 28.0
MD15G1063400 Malus domestica HOM05D008077 ORTHO05D010221 7.2e-10 68.6 104 37.5
Ciclev10029145m.g Citrus clementina HOM05D007054 ORTHO05D008888 1.2e-09 67.8 168 26.2
Oeu021925.1 Olea europaea HOM05D007054 ORTHO05D008888 1.2e-09 67.8 139 30.2
GSVIVG01031807001 Vitis vinifera HOM05D007054 ORTHO05D008888 1.2e-09 67.8 196 26.5
Gohir.A12G026500 Gossypium hirsutum HOM05D007054 ORTHO05D008888 1.6e-09 67.4 168 28.6
Prupe.8G115700 Prunus persica HOM05D007054 ORTHO05D008888 2.1e-09 67.0 143 29.4
Gohir.D12G026100 Gossypium hirsutum HOM05D007054 ORTHO05D008888 2.7e-09 66.6 168 28.0
Gorai.008G026400 Gossypium raimondii HOM05D007054 ORTHO05D008888 2.7e-09 66.6 168 28.0
Manes.15G143900 Manihot esculenta HOM05D007054 ORTHO05D008888 2.7e-09 66.6 139 30.2
CANSAT25G2549 Cannabis sativa HOM05D007054 ORTHO05D008888 4.7e-09 65.9 173 29.5
Ca_12472_v3 Cicer arietinum L. HOM05D007054 ORTHO05D008888 8.0e-09 65.1 139 29.5
QL11p038609 Quercus lobata HOM05D007054 ORTHO05D008888 8.0e-09 65.1 143 28.7
Oeu057672.1 Olea europaea HOM05D007054 ORTHO05D008888 2.3e-08 63.5 140 27.1
Phvul.003G012100 Phaseolus vulgaris HOM05D007054 ORTHO05D008888 2.3e-08 63.5 140 28.6
FvH4_2g07010 Fragaria vesca HOM05D007054 ORTHO05D008888 3.0e-08 63.2 151 28.5
RcHm_v2.0_Chr6g0259351 Rosa chinensis HOM05D007054 ORTHO05D008888 3.0e-08 63.2 139 27.3
FAN15G2151 Fragaria x ananassa HOM05D007054 ORTHO05D008888 6.8e-08 62.0 134 27.6
Dinv42118 Davidia involucrata HOM05D007054 ORTHO05D008888 8.8e-08 61.6 175 25.7
Duzib132G1179 Durio zibethinus HOM05D007054 ORTHO05D008888 8.8e-08 61.6 163 28.2
Hma1.2p1_1543F.1_g289790 Hydrangea macrophylla HOM05D007054 ORTHO05D008888 1.5e-07 60.8 181 26.0
Sc26g0004390 Simmondsia chinensis HOM05D007054 ORTHO05D008888 1.5e-07 60.8 170 26.5
Atru.chr5.2831 Acer truncatum HOM05D007054 ORTHO05D008888 2.6e-07 60.1 138 27.5
CARHR039530 Cardamine hirsuta HOM05D007054 ORTHO05D008888 2.6e-07 60.1 142 28.2
MELO3C018427.2 Cucumis melo HOM05D007054 ORTHO05D008888 7.5e-07 58.5 170 23.5
ClCG02G005650 Citrullus lanatus HOM05D007054 ORTHO05D008888 1.3e-06 57.8 210 24.8
Potri.004G145600 Populus trichocarpa HOM05D007054 ORTHO05D008888 3.7e-06 56.2 167 25.7
SEGI_26902 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 3.7e-06 56.2 170 26.5
Ah.01g002690 Amaranthus hybridus HOM05D007054 ORTHO05D008888 4.9e-06 55.8 200 24.0
CDE02G0602 Ceratophyllum demersum HOM05D007054 ORTHO05D008888 6.3e-06 55.5 141 26.2
CsaV3_7G008860 Cucumis sativus L. HOM05D007054 ORTHO05D008888 8.3e-06 55.1 145 24.1


User provided reference genes

Program Settings