Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G017080 Citrullus lanatus HOM05D008288 ORTHO05D010469 5.0e-166 587.8 321 100.0
Sed0020459 Sechium edule HOM05D008288 ORTHO05D010469 1.2e-148 530.0 321 90.0
CsaV3_3G046560 Cucumis sativus L. HOM05D008288 ORTHO05D010469 2.1e-148 529.3 308 91.9
MELO3C003683.2 Cucumis melo HOM05D008288 ORTHO05D010469 4.5e-122 441.8 319 77.4
Potri.006G251000 Populus trichocarpa HOM05D008288 ORTHO05D010469 2.3e-102 376.3 307 65.5
RcHm_v2.0_Chr6g0298581 Rosa chinensis HOM05D008288 ORTHO05D010469 1.5e-101 373.6 306 66.7
FAN27G1450 Fragaria x ananassa HOM05D008288 ORTHO05D010469 4.8e-100 368.6 306 65.4
FvH4_2g29591 Fragaria vesca HOM05D008288 ORTHO05D010469 6.3e-100 368.2 306 65.4
FAN15G2470 Fragaria x ananassa HOM05D008288 ORTHO05D010469 5.3e-99 365.2 306 64.7
CSS0049569 Camellia sinensis var. sinensis HOM05D008288 ORTHO05D010469 5.9e-98 361.7 310 63.9
Thecc.09G149300 Theobroma cacao HOM05D008288 ORTHO05D010469 1.0e-97 360.9 306 64.7
Actinidia22367 Actinidia chinensis HOM05D008288 ORTHO05D010469 1.4e-96 357.1 298 65.4
MD15G1120900 Malus domestica HOM05D008288 ORTHO05D010469 2.5e-96 356.3 307 63.5
Duzib150G0406 Durio zibethinus HOM05D008288 ORTHO05D010469 4.2e-96 355.5 303 65.0
Hma1.2p1_0000F.1_g000730 Hydrangea macrophylla HOM05D008288 ORTHO05D010469 4.2e-96 355.5 304 64.5
COL.COLO4_23981 Corchorus olitorius HOM05D008288 ORTHO05D010469 1.6e-95 353.6 304 65.8
Ciclev10010324m.g Citrus clementina HOM05D008288 ORTHO05D010469 6.1e-95 351.7 306 63.4
Gohir.D05G048766 Gossypium hirsutum HOM05D008288 ORTHO05D010469 7.9e-95 351.3 307 64.2
Gorai.009G050100 Gossypium raimondii HOM05D008288 ORTHO05D010469 7.9e-95 351.3 307 63.8
Gohir.A05G047000 Gossypium hirsutum HOM05D008288 ORTHO05D010469 1.8e-94 350.1 307 63.5
TWI34G1005 Tripterygium wilfordii HOM05D008288 ORTHO05D010469 2.3e-94 349.7 299 64.5
Atru.chr7.2381 Acer truncatum HOM05D008288 ORTHO05D010469 8.8e-94 347.8 306 62.1
QL02p022482 Quercus lobata HOM05D008288 ORTHO05D010469 3.3e-93 345.9 294 65.0
MD08G1145200 Malus domestica HOM05D008288 ORTHO05D010469 8.2e-92 341.3 306 61.8
PGR031G1353 Punica granatum HOM05D008288 ORTHO05D010469 5.9e-90 335.1 310 61.0
Aqoxy7G02071 Aquilegia oxysepala HOM05D008288 ORTHO05D010469 5.0e-89 332.0 299 59.9
Peaxi162Scf00341g00011 Petunia axillaris HOM05D008288 ORTHO05D010469 1.4e-88 330.5 296 62.8
Nitab4.5_0015147g0010 Nicotiana tabacum HOM05D008288 ORTHO05D010469 3.2e-88 329.3 294 62.9
Sopen08g021110 Solanum pennellii HOM05D008288 ORTHO05D010469 8.0e-87 324.7 304 60.2
TAR625G1133 Trochodendron aralioides HOM05D008288 ORTHO05D010469 6.7e-86 321.6 296 60.8
Solyc08g067170.3 Solanum lycopersicum HOM05D008288 ORTHO05D010469 3.3e-85 319.3 304 59.5
Cpa.g.sc91.46 Carica papaya HOM05D008288 ORTHO05D010469 7.4e-85 318.2 282 63.8
MBI04_g10412_MAGBIO Magnolia biondii HOM05D008288 ORTHO05D010469 1.3e-84 317.4 305 58.0
Prupe.1G473500 Prunus persica HOM05D008288 ORTHO05D010469 1.7e-84 317.0 306 58.8
Nitab4.5_0000151g0060 Nicotiana tabacum HOM05D008288 ORTHO05D010469 3.1e-83 312.8 274 63.9
Psat0ss3186g0240 Pisum sativum HOM05D008288 ORTHO05D010469 1.6e-82 310.5 317 57.7
CAN.G348.1 Capsicum annuum HOM05D008288 ORTHO05D010469 2.6e-82 309.7 306 58.2
Migut.A00319 Erythranthe guttata HOM05D008288 ORTHO05D010469 4.5e-82 308.9 290 60.0
Ca_15724_v3 Cicer arietinum L. HOM05D008288 ORTHO05D010469 1.0e-81 307.8 305 58.4
TPR.G31773 Trifolium pratense HOM05D008288 ORTHO05D010469 3.8e-81 305.8 305 58.4
Phvul.009G095100 Phaseolus vulgaris HOM05D008288 ORTHO05D010469 1.5e-80 303.9 307 58.3
Eucgr.C01784 Eucalyptus grandis HOM05D008288 ORTHO05D010469 7.2e-80 301.6 306 55.9
Medtr3g107650 Medicago truncatula HOM05D008288 ORTHO05D010469 9.4e-80 301.2 304 56.2
Dinv11620 Davidia involucrata HOM05D008288 ORTHO05D010469 2.1e-79 300.1 216 72.7
VMungo1309G1559 Vigna mungo HOM05D008288 ORTHO05D010469 2.1e-79 300.1 301 57.1
SalBow4G3001 Salvia bowleyana HOM05D008288 ORTHO05D010469 1.0e-78 297.7 293 55.6
DCAR_007695 Daucus carota HOM05D008288 ORTHO05D010469 4.8e-76 288.9 272 62.1
PSO455G0067 Papaver somniferum HOM05D008288 ORTHO05D010469 1.5e-72 277.3 295 55.3
Haze_21560 Corylus avellana HOM05D008288 ORTHO05D010469 1.9e-72 276.9 298 56.4
Manes.16G119800 Manihot esculenta HOM05D008288 ORTHO05D010469 1.4e-70 270.8 308 51.6
PSO170G5425 Papaver somniferum HOM05D008288 ORTHO05D010469 3.4e-69 266.2 309 53.4
Glyma.04G068600 Glycine max HOM05D008288 ORTHO05D010469 2.3e-62 243.4 245 59.2
Dinv30173 Davidia involucrata HOM05D008288 ORTHO05D010469 4.1e-59 232.6 298 48.3
Lj1g0026401 Lotus japonicus HOM05D008288 ORTHO05D010469 4.5e-58 229.2 239 56.1
Cfa013175 Carpinus fangiana HOM05D008288 ORTHO05D010469 8.9e-54 214.9 217 59.9
CANSAT54G0155 Cannabis sativa HOM05D008288 ORTHO05D010469 2.2e-52 210.3 183 60.1
Lsat_1_v5_gn_1_45101 Lactuca sativa HOM05D008288 ORTHO05D010469 7.8e-50 201.8 215 56.3
ATR0815G056 Amborella trichopoda HOM05D008288 ORTHO05D010469 1.5e-29 134.4 303 35.6
Solyc08g069220.2 Solanum lycopersicum HOM05D008288 ORTHO05D010469 4.9e-20 102.8 269 33.5
Sopen08g022840 Solanum pennellii HOM05D008288 ORTHO05D010469 1.5e-16 91.3 83 56.6
SEGI_16453 Sequoiadendron giganteum HOM05D008288 ORTHO05D010469 3.8e-12 76.6 299 27.4
Actinidia05554 Actinidia chinensis HOM05D000215 ORTHO05D007108 1.0e-09 68.6 256 30.1
PSO210G4266 Papaver somniferum HOM05D000215 ORTHO05D007108 3.0e-09 67.0 295 27.5
Duzib192G0603 Durio zibethinus HOM05D000215 ORTHO05D007108 1.1e-08 65.1 274 27.0
SHI02135 Sapria himalayana HOM05D000215 ORTHO05D007108 1.5e-08 64.7 202 29.2
Sp7g19440 Schrenkiella parvula HOM05D000215 ORTHO05D007108 2.5e-08 63.9 248 28.6
CsaV3_6G001940 Cucumis sativus L. HOM05D000215 ORTHO05D008904 3.3e-08 63.5 292 25.0
Duzib235G1018 Durio zibethinus HOM05D000215 ORTHO05D007108 3.3e-08 63.5 261 26.8
ClCG11G006020 Citrullus lanatus HOM05D000215 ORTHO05D008904 5.6e-08 62.8 300 24.3
MELO3C008310.2 Cucumis melo HOM05D000215 ORTHO05D008904 5.6e-08 62.8 299 24.4
PSO832G3300 Papaver somniferum HOM05D000215 ORTHO05D007108 5.6e-08 62.8 295 27.1
AL7G32750 Arabidopsis lyrata HOM05D000215 ORTHO05D007108 7.4e-08 62.4 273 26.0
CiPaw.10G113900 Carya illinoinensis HOM05D000215 ORTHO05D007108 7.4e-08 62.4 238 29.0
Haze_06635 Corylus avellana HOM05D000215 ORTHO05D007108 1.6e-07 61.2 197 29.4
Haze_06646 Corylus avellana HOM05D000215 ORTHO05D007108 2.8e-07 60.5 197 29.4
Cfa000298 Carpinus fangiana HOM05D000215 ORTHO05D007108 3.7e-07 60.1 197 29.4
Gohir.A06G208700 Gossypium hirsutum HOM05D000215 ORTHO05D007108 3.7e-07 60.1 261 26.4
MBI02_g37288_MAGBIO Magnolia biondii HOM05D000215 ORTHO05D007108 3.7e-07 60.1 223 28.7
COL.COLO4_31663 Corchorus olitorius HOM05D000215 ORTHO05D007108 4.8e-07 59.7 276 25.4
Lj1g0010870 Lotus japonicus HOM05D000215 ORTHO05D002282 4.8e-07 59.7 291 24.1
Thecc.06G205300 Theobroma cacao HOM05D000215 ORTHO05D007108 4.8e-07 59.7 210 26.7
Aqoxy3G03021 Aquilegia oxysepala HOM05D000215 ORTHO05D003454 6.2e-07 59.3 269 23.8
Pp3c26_8290 Physcomitrium patens HOM05D006338 ORTHO05D007946 6.2e-07 59.3 294 25.5
GSVIVG01006112001 Vitis vinifera HOM05D000215 ORTHO05D007108 6.2e-07 59.3 273 26.4
AT4G21350 Arabidopsis thaliana HOM05D000215 ORTHO05D007108 8.1e-07 58.9 280 25.7
Gohir.D06G212400 Gossypium hirsutum HOM05D000215 ORTHO05D007108 8.1e-07 58.9 201 27.9
QL05p077977 Quercus lobata HOM05D000215 ORTHO05D007108 8.1e-07 58.9 210 26.7
THA.LOC104806263 Tarenaya hassleriana HOM05D000215 ORTHO05D007108 8.1e-07 58.9 272 26.5
Duzib160G0747 Durio zibethinus HOM05D000215 ORTHO05D007108 1.1e-06 58.5 201 28.9
Gorai.011G020300 Gossypium raimondii HOM05D000215 ORTHO05D007108 1.4e-06 58.2 212 27.8
Lalb_Chr20g0122541 Lupinus albus HOM05D000215 ORTHO05D007108 1.4e-06 58.2 279 26.9
Manes.17G031300 Manihot esculenta HOM05D000215 ORTHO05D007108 1.4e-06 58.2 245 29.0
Dinv17864 Davidia involucrata HOM05D000215 ORTHO05D007108 1.8e-06 57.8 273 26.4
Thhalv10025498m.g Eutrema salsugineum HOM05D000215 ORTHO05D007108 1.8e-06 57.8 303 25.4
Gohir.A10G018000 Gossypium hirsutum HOM05D000215 ORTHO05D007108 1.8e-06 57.8 212 27.8
Gohir.D10G018300 Gossypium hirsutum HOM05D000215 ORTHO05D007108 2.4e-06 57.4 212 27.8
CARHR227940 Cardamine hirsuta HOM05D000215 ORTHO05D007108 3.1e-06 57.0 212 28.3
Eucgr.H02615 Eucalyptus grandis HOM05D000215 ORTHO05D003454 3.1e-06 57.0 268 22.8
Rhsim12G0121400 Rhododendron simsii HOM05D000215 ORTHO05D003454 4.0e-06 56.6 272 23.9
TWI38G1621 Tripterygium wilfordii HOM05D000215 ORTHO05D007108 4.0e-06 56.6 212 27.8
Actinidia11824 Actinidia chinensis HOM05D000215 ORTHO05D007108 5.3e-06 56.2 255 25.9
PGR004G2784 Punica granatum HOM05D000215 ORTHO05D007108 5.3e-06 56.2 257 26.8
Manes.16G015200 Manihot esculenta HOM05D000215 ORTHO05D007108 6.9e-06 55.8 222 27.5
TAR627G1172 Trochodendron aralioides HOM05D000215 ORTHO05D007108 6.9e-06 55.8 223 28.3
C01p15280 Brassica napus HOM05D000215 ORTHO05D007108 9.0e-06 55.5 236 26.3
BolC1t01481H Brassica oleracea HOM05D000215 ORTHO05D007108 9.0e-06 55.5 236 26.3


User provided reference genes

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