Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 2.5e-211 739.6 783 100.0
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 3.0e-135 486.9 784 77.7
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 2.0e-128 464.2 792 68.4
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 1.9e-102 377.9 785 68.9
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 2.2e-74 284.6 780 60.8
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 2.7e-72 277.7 794 55.0
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 4.1e-68 263.8 767 52.2
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 7.7e-67 259.6 780 46.4
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 3.6e-64 250.8 793 59.6
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 6.1e-64 250.0 762 46.3
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 1.3e-61 242.3 776 55.2
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.1e-60 239.2 793 44.1
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 1.5e-59 235.3 780 53.2
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 2.0e-59 235.0 740 58.5
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.9e-57 228.4 771 46.0
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 4.7e-56 223.8 787 44.0
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.1e-54 219.2 792 47.5
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 2.2e-53 214.9 786 51.9
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 8.2e-53 213.0 780 49.4
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 1.1e-52 212.6 791 51.7
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 1.4e-52 212.2 792 49.4
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 5.3e-52 210.3 779 45.4
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 5.3e-52 210.3 789 57.5
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 1.6e-51 208.8 787 45.1
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 2.0e-51 208.4 787 45.6
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 4.5e-51 207.2 744 43.8
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 7.7e-51 206.5 738 59.8
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 1.0e-50 206.1 782 49.5
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 5.5e-49 200.3 771 48.5
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 2.1e-48 198.4 743 44.3
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 1.4e-47 195.7 758 48.0
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 4.0e-47 194.1 742 48.2
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 2.0e-46 191.8 743 42.9
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 2.6e-46 191.4 742 59.2
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 5.7e-46 190.3 763 48.4
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 7.5e-46 189.9 774 53.6
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 1.8e-44 185.3 781 54.9
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 5.3e-44 183.7 738 49.5
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 2.0e-43 181.8 741 44.5
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 1.0e-42 179.5 738 46.1
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 2.2e-42 178.3 779 48.0
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 5.0e-42 177.2 777 51.2
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 1.6e-40 172.2 791 43.2
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 2.3e-39 168.3 742 48.5
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 4.0e-39 167.5 745 49.1
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 4.0e-39 167.5 787 53.4
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 1.5e-38 165.6 700 55.3
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 2.8e-37 161.4 782 45.4
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 3.7e-37 161.0 770 49.7
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 3.7e-37 161.0 761 42.4
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 4.5e-35 154.1 745 48.2
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 5.9e-35 153.7 780 44.5
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 1.7e-34 152.1 786 53.2
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 5.0e-34 150.6 789 49.9
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 5.5e-33 147.1 786 41.9
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 1.6e-32 145.6 769 55.7
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 1.0e-31 142.9 793 53.8
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 2.3e-31 141.7 756 48.3
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 7.5e-30 136.7 786 51.5
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 1.8e-28 132.1 738 48.8
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 3.1e-28 131.3 744 46.4
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 3.1e-28 131.3 779 44.5
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 4.1e-28 131.0 785 46.0
TAR636G0610 Trochodendron aralioides HOM05D006421 ORTHO05D008268 4.1e-28 131.0 150 52.7
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 7.0e-28 130.2 783 47.1
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 7.0e-28 130.2 743 51.7
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 9.2e-28 129.8 137 54.0
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 1.6e-27 129.0 780 50.9
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 1.6e-27 129.0 766 46.5
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 1.9e-25 122.1 734 49.0
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 1.9e-25 122.1 776 43.9
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 1.9e-25 122.1 745 43.9
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 1.2e-24 119.4 734 46.3
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 2.1e-24 118.6 458 47.6
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 8.0e-24 116.7 290 60.0
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 2.3e-23 115.2 235 38.3
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 4.0e-23 114.4 789 42.6
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 4.0e-23 114.4 776 46.6
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 6.8e-23 113.6 693 49.6
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 8.9e-23 113.2 784 41.1
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 5.8e-22 110.5 448 52.7
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 7.5e-22 110.2 732 52.2
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 1.7e-21 109.0 141 48.9
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 4.9e-21 107.5 236 53.8
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 1.6e-19 102.4 780 43.7
unitig_748.g8080 Utricularia gibba HOM05D006421 ORTHO05D008268 2.0e-19 102.1 719 55.4
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 1.7e-18 99.0 147 42.2
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 1.7e-18 99.0 141 45.4
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 6.6e-18 97.1 782 44.5
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 3.6e-16 91.3 526 46.8
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 8.0e-16 90.1 792 44.3
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 6.8e-15 87.0 496 36.3
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 6.8e-15 87.0 496 36.3
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 1.5e-14 85.9 206 47.6
C02p24000 Brassica napus HOM05D006421 ORTHO05D008268 2.0e-14 85.5 148 44.6
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 3.7e-13 81.3 414 37.4
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 1.1e-12 79.7 229 33.2
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 2.4e-12 78.6 124 42.7
BraA10t43273Z Brassica rapa HOM05D006421 ORTHO05D008268 3.2e-12 78.2 160 38.8
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 1.2e-11 76.3 412 36.9
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 2.7e-11 75.1 487 35.9
Zm00001eb206500 Zea mays HOM05D006421 ORTHO05D008268 4.6e-11 74.3 102 38.2
Os02g0186400 Oryza sativa ssp. japonica HOM05D006421 ORTHO05D008268 1.7e-10 72.4 123 36.6
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 1.7e-10 72.4 134 38.8
FAN15G2294 Fragaria x ananassa HOM05D006421 ORTHO05D008268 3.0e-10 71.6 135 37.8
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 3.0e-10 71.6 731 44.3
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 1.9e-09 68.9 412 40.3
FAN15G3016 Fragaria x ananassa HOM05D006421 ORTHO05D008268 5.6e-09 67.4 244 55.3
Glyma.14G115900 Glycine max HOM05D006421 ORTHO05D008268 2.6e-06 58.5 149 34.9
Sabra18G0028800 Salix brachista HOM05D006421 ORTHO05D008268 4.4e-06 57.8 132 37.1


User provided reference genes

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