Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 2.8e-74 282.0 154 100.0
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 2.0e-59 232.6 154 85.1
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 1.2e-56 223.4 154 82.5
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 1.8e-44 183.0 155 69.0
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 7.5e-43 177.6 158 70.9
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 3.2e-41 172.2 158 69.0
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 3.5e-40 168.7 158 66.5
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.3e-39 166.8 116 84.5
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.3e-39 166.0 160 66.9
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.3e-39 166.0 160 66.9
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 2.3e-39 166.0 158 67.7
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 3.0e-39 165.6 148 68.2
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 3.0e-39 165.6 154 67.5
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 1.1e-38 163.7 158 65.2
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 1.5e-38 163.3 158 67.7
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 5.6e-38 161.4 148 67.6
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 7.3e-38 161.0 106 83.0
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 1.2e-37 160.2 156 64.7
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 6.2e-37 157.9 155 66.5
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 1.8e-36 156.4 115 80.0
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 2.3e-36 156.0 153 66.7
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 4.0e-36 155.2 114 65.8
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 6.8e-36 154.5 108 82.4
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 1.5e-35 153.3 133 72.2
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 1.5e-35 153.3 155 63.2
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 2.0e-35 152.9 159 62.3
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 2.6e-35 152.5 113 81.4
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 2.6e-35 152.5 159 64.2
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 4.4e-35 151.8 159 61.6
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 5.8e-35 151.4 159 64.2
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 7.6e-35 151.0 108 84.3
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 4.9e-34 148.3 159 60.4
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 6.4e-34 147.9 103 81.6
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 8.4e-34 147.5 110 78.2
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 1.1e-33 147.1 125 60.8
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 1.1e-33 147.1 103 79.6
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 1.4e-33 146.7 124 70.2
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 2.4e-33 146.0 159 61.0
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 2.4e-33 146.0 122 70.5
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 7.1e-33 144.4 158 63.3
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 1.2e-32 143.7 124 69.4
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 1.6e-32 143.3 122 71.3
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.6e-32 143.3 156 63.5
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 1.6e-32 143.3 108 74.1
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 4.6e-32 141.7 155 60.6
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 4.6e-32 141.7 103 80.6
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 6.0e-32 141.4 152 62.5
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 7.8e-32 141.0 105 77.1
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 7.8e-32 141.0 105 77.1
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 1.0e-31 140.6 101 79.2
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 1.0e-31 140.6 108 75.0
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 1.0e-31 140.6 150 64.0
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 1.3e-31 140.2 103 78.6
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 1.3e-31 140.2 103 78.6
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 1.7e-31 139.8 143 62.9
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 2.3e-31 139.4 152 61.8
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 2.3e-31 139.4 130 68.5
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 3.0e-31 139.0 104 80.8
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 3.0e-31 139.0 105 78.1
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 3.0e-31 139.0 105 78.1
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 3.9e-31 138.7 157 61.8
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 3.9e-31 138.7 152 61.8
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 3.9e-31 138.7 152 62.5
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 3.9e-31 138.7 152 61.8
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 3.9e-31 138.7 152 62.5
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 6.6e-31 137.9 106 78.3
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 8.6e-31 137.5 110 73.6
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 8.6e-31 137.5 100 78.0
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 1.1e-30 137.1 127 68.5
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 1.1e-30 137.1 154 59.1
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 1.9e-30 136.3 157 61.1
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 1.9e-30 136.3 108 74.1
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 1.9e-30 136.3 100 82.0
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 3.3e-30 135.6 157 63.1
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 4.3e-30 135.2 100 81.0
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 5.6e-30 134.8 100 80.0
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 5.6e-30 134.8 100 80.0
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 7.3e-30 134.4 107 76.6
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 7.3e-30 134.4 104 78.8
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 7.3e-30 134.4 99 80.8
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 9.6e-30 134.0 152 61.8
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 9.6e-30 134.0 107 74.8
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 9.6e-30 134.0 101 78.2
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 1.2e-29 133.7 105 75.2
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 3.6e-29 132.1 121 71.1
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 3.6e-29 132.1 100 78.0
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 8.1e-29 131.0 100 78.0
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 1.1e-28 130.6 108 72.2
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 4.0e-28 128.6 103 77.7
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 5.2e-28 128.3 97 75.3
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 6.8e-28 127.9 126 69.0
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 5.8e-27 124.8 102 74.5
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 1.7e-26 123.2 151 59.6
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 6.4e-26 121.3 77 71.4
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 7.1e-25 117.9 94 78.7
CsaV3_4G036390 Cucumis sativus L. HOM05D018710 ORTHO05D009055 1.2e-24 117.1 83 73.5
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 6.0e-24 114.8 93 71.0
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 3.9e-23 112.1 85 76.5
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 6.6e-23 111.3 75 85.3
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 6.6e-23 111.3 86 76.7
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 2.5e-22 109.4 79 81.0
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 5.6e-22 108.2 75 84.0
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 9.6e-22 107.5 121 57.0
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 8.1e-21 104.4 108 59.3
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 8.1e-21 104.4 83 72.3
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 1.5e-14 83.6 86 54.7
QL02p017999 Quercus lobata HOM05D007253 ORTHO05D009055 6.0e-08 61.6 78 52.6
Oeu010291.1 Olea europaea HOM05D007253 ORTHO05D009055 1.9e-06 56.6 58 44.8


User provided reference genes

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