Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 1.6e-216 755.7 375 100.0
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 1.8e-178 629.4 319 96.6
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 3.3e-177 625.2 317 96.2
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 1.2e-163 580.1 319 88.7
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 4.7e-155 551.6 312 84.9
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 2.3e-154 549.3 318 82.7
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 2.0e-153 546.2 318 83.0
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 2.0e-153 546.2 302 84.8
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 2.8e-152 542.3 318 82.4
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 6.3e-152 541.2 313 82.1
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 1.1e-151 540.4 318 82.1
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.1e-151 540.4 318 82.1
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 3.1e-151 538.9 315 82.2
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 7.0e-151 537.7 315 83.2
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 9.1e-151 537.3 318 81.8
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.2e-150 537.0 318 81.4
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 1.6e-150 536.6 312 82.4
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 4.5e-150 535.0 312 81.7
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 1.3e-149 533.5 312 81.7
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 2.5e-148 529.3 321 80.1
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 7.2e-148 527.7 318 80.5
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 1.6e-147 526.6 312 80.1
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 3.6e-147 525.4 312 81.1
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 1.5e-145 520.0 309 80.9
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 2.6e-145 519.2 328 78.0
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 5.7e-145 518.1 318 78.3
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 2.2e-144 516.2 318 77.7
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 3.7e-144 515.4 284 84.5
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 3.7e-144 515.4 314 79.0
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 1.1e-143 513.8 318 77.4
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 1.8e-143 513.1 321 78.8
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 3.1e-143 512.3 315 78.4
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 3.1e-143 512.3 318 76.7
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 4.1e-143 511.9 332 78.0
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 9.1e-143 510.8 322 79.2
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 2.0e-142 509.6 312 78.2
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 8.6e-141 504.2 325 75.7
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 1.1e-140 503.8 324 76.9
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 1.5e-140 503.4 325 75.7
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 1.5e-140 503.4 312 78.5
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 1.9e-140 503.1 325 75.4
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 4.2e-140 501.9 326 76.1
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 2.1e-139 499.6 321 76.9
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 2.1e-139 499.6 326 74.8
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 2.8e-139 499.2 326 74.5
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 2.8e-139 499.2 314 78.0
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 1.8e-138 496.5 336 75.9
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 3.0e-138 495.7 318 74.8
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 5.2e-138 495.0 318 76.1
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 8.9e-138 494.2 328 73.5
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 8.9e-138 494.2 327 73.7
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 4.4e-137 491.9 327 73.4
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 3.7e-136 488.8 327 73.1
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 3.7e-136 488.8 307 77.5
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 4.9e-136 488.4 318 74.2
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 1.4e-135 486.9 327 72.8
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 1.4e-135 486.9 327 72.8
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 1.4e-135 486.9 323 74.3
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 4.1e-135 485.3 288 81.2
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 5.4e-135 485.0 328 72.6
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 5.4e-135 485.0 328 72.6
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 5.4e-135 485.0 326 73.9
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 9.2e-135 484.2 331 72.2
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 8.0e-131 471.1 284 79.6
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 1.4e-130 470.3 284 79.6
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 3.1e-130 469.2 302 75.2
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 4.4e-129 465.3 319 72.7
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 7.5e-129 464.5 395 61.8
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 1.3e-128 463.8 306 76.1
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 1.3e-128 463.8 314 74.5
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 7.0e-127 458.0 322 73.3
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 9.2e-127 457.6 424 59.4
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 7.3e-124 448.0 259 81.5
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 9.5e-124 447.6 306 69.9
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.8e-122 443.4 252 81.7
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 8.9e-122 441.0 271 79.7
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 5.8e-121 438.3 272 77.9
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 1.7e-120 436.8 290 72.8
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 1.4e-119 433.7 263 77.2
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 2.1e-118 429.9 250 81.2
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 1.3e-117 427.2 285 75.8
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 6.6e-117 424.9 326 66.9
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 1.5e-116 423.7 292 72.3
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 1.1e-114 417.5 304 65.8
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 1.1e-114 417.5 335 65.7
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 6.8e-114 414.8 299 71.2
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 3.2e-111 406.0 240 82.1
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 2.1e-110 403.3 318 66.4
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 2.7e-110 402.9 305 66.2
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 2.7e-110 402.9 303 63.7
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 3.5e-110 402.5 261 75.1
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 9.6e-108 394.4 297 63.3
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 9.9e-105 384.4 288 63.2
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 2.9e-104 382.9 313 63.9
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 7.8e-102 374.8 641 39.0
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 5.4e-95 352.1 288 65.6
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 1.6e-94 350.5 263 68.1
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 4.6e-94 349.0 263 63.9
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 1.3e-83 314.3 208 73.6
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 4.8e-83 312.4 312 57.7
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 4.0e-82 309.3 305 54.4
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 6.0e-78 295.4 192 69.3
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 2.4e-74 283.5 240 62.9
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 5.0e-72 275.8 224 60.3
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 1.1e-68 264.6 191 69.6
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 2.8e-67 260.0 156 78.2
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 2.0e-65 253.8 164 76.8
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 1.1e-63 248.1 318 48.7
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 7.2e-63 245.4 153 75.8
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 3.6e-62 243.0 243 57.6
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 2.5e-60 236.9 191 65.4
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 3.6e-54 216.5 174 60.9
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 4.4e-52 209.5 145 69.7
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 1.3e-48 198.0 131 75.6
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 3.5e-41 173.3 90 87.8
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 7.7e-41 172.2 101 78.2
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 5.9e-33 146.0 302 33.1
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 4.2e-31 139.8 266 32.7
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 8.0e-30 135.6 92 68.5
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 1.3e-27 128.3 80 76.2
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 3.2e-18 97.1 337 27.0
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 1.2e-14 85.1 158 38.0
MD15G1048200 Malus domestica HOM05D006118 ORTHO05D007750 3.4e-12 77.0 45 73.3
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 1.3e-11 75.1 53 64.2
HPP92_016211 Vanilla planifolia HOM05D006118 ORTHO05D007750 1.7e-08 64.7 46 69.6
BcaB01g01552 Brassica carinata HOM05D006118 ORTHO05D007750 1.9e-07 61.2 54 64.8


User provided reference genes

Program Settings