Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G015420 Citrullus lanatus HOM05D007648 ORTHO05D009613 2.2e-36 155.2 83 100.0
Sed0006121 Sechium edule HOM05D007648 ORTHO05D009613 1.2e-31 139.4 81 90.1
CsaV3_3G046120 Cucumis sativus L. HOM05D007648 ORTHO05D009613 1.7e-28 129.0 81 84.0
TAR625G0376 Trochodendron aralioides HOM05D007648 ORTHO05D009613 1.7e-28 129.0 81 81.5
Dinv31891 Davidia involucrata HOM05D007648 ORTHO05D009613 1.4e-27 125.9 81 77.8
QL02p012929 Quercus lobata HOM05D007648 ORTHO05D009613 1.4e-27 125.9 81 77.8
Sabra14G0141300 Salix brachista HOM05D000525 ORTHO05D001368 1.4e-27 125.9 82 78.0
CiPaw.07G143700 Carya illinoinensis HOM05D007648 ORTHO05D009613 1.8e-27 125.6 81 77.8
Haze_22702 Corylus avellana HOM05D007648 ORTHO05D009613 1.8e-27 125.6 80 81.2
Potri.014G181400 Populus trichocarpa HOM05D007648 ORTHO05D009613 1.8e-27 125.6 82 78.0
MELO3C003728.2 Cucumis melo HOM05D007648 ORTHO05D009613 2.4e-27 125.2 81 81.5
RcHm_v2.0_Chr6g0303661 Rosa chinensis HOM05D007648 ORTHO05D009613 4.1e-27 124.4 81 77.8
Prupe.1G359500 Prunus persica HOM05D007648 ORTHO05D009613 7.0e-27 123.6 81 76.5
GSVIVG01008741001 Vitis vinifera HOM05D007648 ORTHO05D009613 7.0e-27 123.6 81 77.8
Manes.05G142600 Manihot esculenta HOM05D007648 ORTHO05D009613 2.0e-26 122.1 81 75.3
TWI12G0541 Tripterygium wilfordii HOM05D007648 ORTHO05D009613 2.0e-26 122.1 83 73.5
FvH4_2g37960 Fragaria vesca HOM05D007648 ORTHO05D009613 2.6e-26 121.7 81 76.5
CARHR069590 Cardamine hirsuta HOM05D007648 ORTHO05D009613 4.5e-26 120.9 81 76.5
CSS0030217 Camellia sinensis var. sinensis HOM05D007648 ORTHO05D009613 5.9e-26 120.6 81 76.5
Thecc.08G051700 Theobroma cacao HOM05D007648 ORTHO05D009613 1.0e-25 119.8 81 76.5
Hund05152 Selenicereus undatus HOM05D000399 ORTHO05D000304 1.3e-25 119.4 80 75.0
FAN20G1741 Fragaria x ananassa HOM05D007648 ORTHO05D009613 2.2e-25 118.6 81 75.3
Lsat_1_v5_gn_5_1580 Lactuca sativa HOM05D007648 ORTHO05D009613 2.2e-25 118.6 81 74.1
AT1G76065 Arabidopsis thaliana HOM05D007648 ORTHO05D009613 2.9e-25 118.2 80 73.8
arahy.Tifrunner.gnm1.ann1.8I3IQY Arachis hypogaea HOM05D007648 ORTHO05D009613 2.9e-25 118.2 79 72.2
FAN15G0474 Fragaria x ananassa HOM05D007648 ORTHO05D009613 3.8e-25 117.9 81 74.1
Carub.0002s2295 Capsella rubella HOM05D007648 ORTHO05D009613 5.0e-25 117.5 81 72.8
COL.COLO4_26084 Corchorus olitorius HOM05D007648 ORTHO05D009613 5.0e-25 117.5 81 75.3
Ciclev10003012m.g Citrus clementina HOM05D007648 ORTHO05D009613 6.5e-25 117.1 81 71.6
Thhalv10019391m.g Eutrema salsugineum HOM05D007648 ORTHO05D009613 6.5e-25 117.1 81 74.1
THA.LOC104811443 Tarenaya hassleriana HOM05D007648 ORTHO05D009613 6.5e-25 117.1 81 70.4
MD15G1006800 Malus domestica HOM05D007648 ORTHO05D009613 8.5e-25 116.7 81 72.8
MD08G1007600 Malus domestica HOM05D007648 ORTHO05D009613 1.1e-24 116.3 81 74.1
arahy.Tifrunner.gnm1.ann1.EILY3I Arachis hypogaea HOM05D007648 ORTHO05D009613 1.5e-24 115.9 77 72.7
Duzib093G2040 Durio zibethinus HOM05D007648 ORTHO05D009613 1.5e-24 115.9 81 74.1
Lj5g0008894 Lotus japonicus HOM05D007648 ORTHO05D009613 1.5e-24 115.9 77 72.7
Atru.chr13.217 Acer truncatum HOM05D007648 ORTHO05D009613 1.9e-24 115.5 80 77.5
Sc02g0008880 Simmondsia chinensis HOM05D007648 ORTHO05D009613 1.9e-24 115.5 81 71.6
AL2G36100 Arabidopsis lyrata HOM05D007648 ORTHO05D009613 2.5e-24 115.2 80 71.2
Sc02g0008840 Simmondsia chinensis HOM05D007648 ORTHO05D009613 2.5e-24 115.2 81 71.6
Aqoxy5G01099 Aquilegia oxysepala HOM05D007648 ORTHO05D009613 3.2e-24 114.8 81 71.6
ECA238G3742 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.2e-24 114.8 72 79.2
Eucgr.F03708 Eucalyptus grandis HOM05D007648 ORTHO05D009613 3.2e-24 114.8 81 71.6
HanXRQChr06g0185111 Helianthus annuus HOM05D007648 ORTHO05D009613 3.2e-24 114.8 80 73.8
Phvul.001G002600 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 3.2e-24 114.8 78 73.1
Actinidia29767 Actinidia chinensis HOM05D007648 ORTHO05D009613 4.2e-24 114.4 81 74.1
Phvul.001G002300 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 4.2e-24 114.4 77 74.0
Aa31LG4G6180 Aethionema arabicum HOM05D007648 ORTHO05D009613 5.5e-24 114.0 80 71.2
PGSC0003DMG400023820 Solanum tuberosum HOM05D007648 ORTHO05D009613 7.2e-24 113.6 79 68.4
Ca_13484_v3 Cicer arietinum L. HOM05D007648 ORTHO05D009613 9.4e-24 113.2 77 71.4
Psat6g001120 Pisum sativum HOM05D007648 ORTHO05D009613 9.4e-24 113.2 77 71.4
Rhsim07G0248300 Rhododendron simsii HOM05D007648 ORTHO05D009613 9.4e-24 113.2 81 71.6
BraA08t32933Z Brassica rapa HOM05D007648 ORTHO05D009613 1.2e-23 112.8 81 70.4
Glyma.17G261200 Glycine max HOM05D007648 ORTHO05D009613 1.2e-23 112.8 77 70.1
Sopen06g017690 Solanum pennellii HOM05D007648 ORTHO05D009613 1.6e-23 112.5 79 67.1
EL10Ac1g02083 Beta vulgaris HOM05D000399 ORTHO05D000304 2.1e-23 112.1 80 73.8
CAN.G22.4 Capsicum annuum HOM05D007648 ORTHO05D009613 2.7e-23 111.7 79 65.8
Medtr1g026100 Medicago truncatula HOM05D007648 ORTHO05D009613 2.7e-23 111.7 77 70.1
Cc10_g01140 Coffea canephora HOM05D007648 ORTHO05D009613 3.6e-23 111.3 78 71.8
Os02g0667000 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 4.7e-23 110.9 79 70.9
A08p09340 Brassica napus HOM05D007648 ORTHO05D009613 6.1e-23 110.5 81 69.1
BolC8t48002H Brassica oleracea HOM05D007648 ORTHO05D009613 6.1e-23 110.5 81 69.1
DCAR_021446 Daucus carota HOM05D007648 ORTHO05D009613 6.1e-23 110.5 81 67.9
Lalb_Chr19g0131601 Lupinus albus HOM05D007648 ORTHO05D009613 6.1e-23 110.5 77 67.5
Ah.00g000660 Amaranthus hybridus HOM05D007648 ORTHO05D009613 8.0e-23 110.2 80 71.2
vmacro17151 Vaccinium macrocarpon HOM05D007648 ORTHO05D009613 8.0e-23 110.2 81 70.4
Gohir.D01G035600 Gossypium hirsutum HOM05D007648 ORTHO05D009613 1.4e-22 109.4 77 75.3
VMungo0647G0751 Vigna mungo HOM05D007648 ORTHO05D009613 1.4e-22 109.4 75 72.0
BcaB07g30075 Brassica carinata HOM05D007648 ORTHO05D009613 1.8e-22 109.0 81 69.1
BcaC07g37632 Brassica carinata HOM05D007648 ORTHO05D009613 1.8e-22 109.0 81 67.9
Gorai.002G043700 Gossypium raimondii HOM05D007648 ORTHO05D009613 1.8e-22 109.0 77 75.3
SalBow7G1731 Salvia bowleyana HOM05D007648 ORTHO05D009613 2.3e-22 108.6 80 67.5
Gohir.A01G044700 Gossypium hirsutum HOM05D007648 ORTHO05D009613 3.0e-22 108.2 77 74.0
HPP92_003481 Vanilla planifolia HOM05D007648 ORTHO05D009613 3.0e-22 108.2 81 70.4
PSO210G3155 Papaver somniferum HOM05D007648 ORTHO05D009613 5.2e-22 107.5 74 71.6
HPP92_026879 Vanilla planifolia HOM05D007648 ORTHO05D009613 1.1e-21 106.3 81 69.1
CDE04G2628 Ceratophyllum demersum HOM05D007648 ORTHO05D009613 3.3e-21 104.8 79 70.9
Rhsim07G0248100 Rhododendron simsii HOM05D007648 ORTHO05D009613 3.3e-21 104.8 79 67.1
CAN.G22.7 Capsicum annuum HOM05D007648 ORTHO05D009613 7.5e-21 103.6 78 64.1
MBI05_g46751_MAGBIO Magnolia biondii HOM05D007648 ORTHO05D009613 1.7e-20 102.4 73 69.9
Migut.C00899 Erythranthe guttata HOM05D007648 ORTHO05D009613 3.7e-20 101.3 77 63.6
BraA02t08664Z Brassica rapa HOM05D007648 ORTHO05D009613 6.3e-20 100.5 74 67.6
BolC2t11627H Brassica oleracea HOM05D007648 ORTHO05D009613 5.9e-18 94.0 81 63.0
Nitab4.5_0004193g0030 Nicotiana tabacum HOM05D000998 ORTHO05D000806 2.9e-17 91.7 66 66.7
Peaxi162Scf00394g00212 Petunia axillaris HOM05D007648 ORTHO05D009613 4.2e-16 87.8 68 63.2
AUR62036713 Chenopodium quinoa HOM05D000399 ORTHO05D000304 9.4e-16 86.7 134 44.0
Nitab4.5_0000716g0050 Nicotiana tabacum HOM05D000998 ORTHO05D000806 2.1e-15 85.5 61 67.2
AagrBONN_evm.TU.Sc2ySwM_344.3278 Anthoceros agrestis HOM05D007648 ORTHO05D009613 1.4e-14 82.8 76 56.6
C02p55750 Brassica napus HOM05D007648 ORTHO05D009613 6.8e-14 80.5 70 60.0
Mapoly0088s0028 Marchantia polymorpha HOM05D007648 ORTHO05D009613 6.8e-14 80.5 79 53.2
Pp3c8_20950 Physcomitrium patens HOM05D007648 ORTHO05D009613 8.8e-14 80.1 77 53.2
A02p36690 Brassica napus HOM05D007648 ORTHO05D009613 3.4e-13 78.2 59 62.7
unitig_748.g7721 Utricularia gibba HOM05D007648 ORTHO05D009613 1.2e-10 69.7 46 67.4
AUR62013884 Chenopodium quinoa HOM05D007648 ORTHO05D009613 2.7e-10 68.6 44 75.0
Os03g0159800 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 5.9e-10 67.4 48 66.7
SalBow1G6040 Salvia bowleyana HOM05D038733 ORTHO05D009613 5.9e-10 67.4 45 68.9
SalBow7G3523 Salvia bowleyana HOM05D038733 ORTHO05D009613 5.9e-10 67.4 45 68.9
Actinidia37950 Actinidia chinensis HOM05D007648 ORTHO05D009613 1.2e-07 59.7 38 73.7
BcaC03g17585 Brassica carinata HOM05D007648 ORTHO05D009613 1.4e-06 56.2 80 46.2


User provided reference genes

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