Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 3.4e-184 648.3 347 100.0
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 5.8e-168 594.3 363 89.0
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.6e-160 568.9 363 85.1
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 1.6e-157 559.7 363 83.7
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 2.7e-141 505.8 362 75.4
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 2.7e-141 505.8 362 76.8
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 6.7e-140 501.1 363 74.9
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 2.5e-139 499.2 337 78.0
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 1.4e-137 493.4 336 77.4
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 5.3e-137 491.5 376 72.3
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 1.0e-135 487.3 336 76.2
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 6.5e-135 484.6 336 76.5
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 8.5e-135 484.2 363 72.5
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 1.9e-134 483.0 336 75.6
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 5.5e-134 481.5 354 70.3
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 9.4e-134 480.7 359 73.0
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 2.7e-133 479.2 356 72.5
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 6.1e-133 478.0 362 71.8
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 1.8e-132 476.5 362 71.8
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 1.8e-132 476.5 346 73.7
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 2.3e-132 476.1 336 75.0
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 3.0e-132 475.7 339 75.5
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 3.0e-132 475.7 339 75.5
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 3.9e-132 475.3 335 74.3
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 5.1e-132 474.9 363 71.1
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 1.5e-131 473.4 362 70.7
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 2.6e-131 472.6 363 70.8
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 3.3e-131 472.2 348 71.6
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 9.7e-131 470.7 362 70.4
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 1.3e-130 470.3 349 72.2
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 1.3e-130 470.3 365 70.1
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 1.7e-130 469.9 337 73.9
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 1.1e-129 467.2 362 69.9
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 1.4e-129 466.8 337 71.8
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 2.4e-129 466.1 365 70.4
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 3.1e-129 465.7 363 70.0
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 7.0e-129 464.5 339 73.2
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 1.5e-128 463.4 338 73.7
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 2.0e-128 463.0 333 73.0
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 2.6e-128 462.6 333 73.3
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 2.6e-128 462.6 336 73.2
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 1.0e-127 460.7 364 69.5
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 2.2e-127 459.5 353 70.5
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 6.5e-127 458.0 346 70.8
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 6.5e-127 458.0 336 72.0
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 1.4e-126 456.8 344 70.6
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 1.4e-126 456.8 333 73.0
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 1.9e-126 456.4 362 70.2
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 1.9e-126 456.4 369 68.0
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 3.2e-126 455.7 365 69.9
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 3.2e-126 455.7 354 68.4
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 4.2e-126 455.3 333 72.7
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 5.5e-126 454.9 352 68.5
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 5.5e-126 454.9 332 72.0
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 5.5e-126 454.9 369 67.8
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 7.2e-126 454.5 333 71.8
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 7.2e-126 454.5 363 68.6
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 9.4e-126 454.1 362 67.4
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 2.1e-125 453.0 333 72.4
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 4.7e-125 451.8 332 72.0
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 1.4e-124 450.3 333 72.4
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 1.4e-124 450.3 363 68.0
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 2.3e-124 449.5 337 71.5
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 2.3e-124 449.5 342 71.6
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 6.7e-124 448.0 364 67.0
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 8.8e-124 447.6 364 67.6
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 5.7e-123 444.9 336 69.6
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 7.4e-123 444.5 339 70.2
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 4.8e-122 441.8 336 70.8
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 6.3e-122 441.4 339 69.6
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 1.1e-121 440.7 361 65.9
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 1.8e-121 439.9 354 67.2
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 3.1e-121 439.1 332 68.1
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 4.1e-121 438.7 361 65.7
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 4.1e-121 438.7 364 67.3
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 5.3e-121 438.3 333 71.8
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 1.2e-120 437.2 362 65.5
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 2.0e-120 436.4 362 65.5
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 2.0e-120 436.4 362 65.5
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 4.5e-120 435.3 365 65.5
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 3.8e-119 432.2 347 67.7
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 2.5e-118 429.5 363 65.3
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 7.2e-118 427.9 355 67.9
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 8.8e-116 421.0 339 68.1
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 1.5e-115 420.2 339 67.3
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 2.6e-115 419.5 298 74.5
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 9.1e-113 411.0 346 63.9
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 1.7e-111 406.8 269 78.1
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 1.2e-109 400.6 269 77.3
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 8.3e-106 387.9 273 75.8
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 2.0e-99 366.7 331 58.3
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 1.4e-97 360.5 373 56.8
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 3.2e-97 359.4 355 55.5
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 1.4e-92 344.0 367 57.2
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 1.6e-88 330.5 333 55.0
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 3.4e-83 312.8 242 69.8
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 1.2e-77 294.3 250 63.6
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.4e-76 290.8 194 80.9
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 7.8e-64 248.4 177 78.0
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 3.9e-63 246.1 353 44.2
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 6.6e-63 245.4 272 53.7
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 1.3e-58 231.1 343 42.9
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 4.9e-58 229.2 192 64.1
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 8.4e-58 228.4 228 58.8
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 5.4e-57 225.7 155 79.4
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 3.9e-55 219.5 309 43.7
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 3.4e-51 206.5 214 54.2
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 2.9e-50 203.4 364 41.5
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 7.1e-49 198.7 359 39.3
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.3e-47 194.5 114 88.6
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 1.5e-46 191.0 140 70.7
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 1.4e-41 174.5 197 51.3
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 7.9e-40 168.7 261 43.3
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 2.0e-27 127.5 99 68.7
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 7.7e-27 125.6 133 54.1
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 2.3e-23 114.0 62 91.9
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 4.3e-22 109.8 112 60.7
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 3.7e-21 106.7 88 63.6
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 1.1e-09 68.6 57 64.9
Zm00001eb241410 Zea mays HOM05D006520 ORTHO05D442212 9.4e-09 65.5 62 56.5


User provided reference genes

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