Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G014450 Citrullus lanatus HOM05D005769 ORTHO05D006851 7.9e-86 320.5 168 100.0
MELO3C018076.2 Cucumis melo HOM05D005769 ORTHO05D006851 2.9e-72 275.4 171 86.5
CsaV3_3G023280 Cucumis sativus L. HOM05D005769 ORTHO05D006851 1.4e-71 273.1 170 85.9
Sed0023999 Sechium edule HOM05D005769 ORTHO05D006851 2.1e-70 269.2 169 82.2
Sed0008399 Sechium edule HOM05D005769 ORTHO05D006851 6.7e-69 264.2 169 82.2
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 4.2e-39 165.2 168 55.4
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 5.3e-34 148.3 170 48.8
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 1.6e-33 146.7 170 48.2
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 7.7e-33 144.4 167 50.3
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 2.2e-32 142.9 170 48.2
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 3.8e-32 142.1 167 49.7
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 8.5e-32 141.0 166 47.6
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 1.1e-31 140.6 168 47.6
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 1.9e-31 139.8 165 49.1
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 2.5e-31 139.4 168 48.8
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 4.2e-31 138.7 173 45.7
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 9.4e-31 137.5 169 46.7
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 1.2e-30 137.1 168 45.8
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 1.6e-30 136.7 165 48.5
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 1.6e-30 136.7 166 47.0
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 2.1e-30 136.3 168 45.8
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 3.6e-30 135.6 165 47.3
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 4.7e-30 135.2 165 48.5
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 4.7e-30 135.2 165 44.2
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 6.1e-30 134.8 167 46.7
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.0e-29 134.0 169 45.6
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 1.4e-29 133.7 165 47.3
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 1.8e-29 133.3 168 46.4
CANSAT21G1553 Cannabis sativa HOM05D005769 ORTHO05D006851 4.0e-29 132.1 165 49.1
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 5.2e-29 131.7 165 48.5
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 6.8e-29 131.3 174 46.6
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.2e-28 130.6 168 45.8
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.2e-28 130.6 168 45.8
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 1.2e-28 130.6 175 45.1
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 1.5e-28 130.2 168 45.2
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 2.0e-28 129.8 165 46.7
Lj1P869T51 Lonicera japonica HOM05D005769 ORTHO05D006851 2.6e-28 129.4 169 46.2
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 2.6e-28 129.4 165 42.4
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 3.4e-28 129.0 168 45.2
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 5.7e-28 128.3 164 44.5
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 5.7e-28 128.3 165 43.6
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 7.5e-28 127.9 168 42.9
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 9.8e-28 127.5 173 48.6
Nitab4.5_0000653g0070 Nicotiana tabacum HOM05D005769 ORTHO05D006851 9.8e-28 127.5 165 43.0
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 1.3e-27 127.1 168 48.2
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.3e-27 127.1 167 46.1
Nitab4.5_0000749g0110 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.7e-27 126.7 165 42.4
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 1.7e-27 126.7 169 46.7
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 2.2e-27 126.3 165 44.8
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 2.8e-27 125.9 173 48.0
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.4e-26 123.6 165 41.8
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 4.1e-26 122.1 165 41.2
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 9.1e-26 120.9 165 40.6
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 2.7e-25 119.4 168 45.2
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 2.7e-25 119.4 166 44.0
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 4.5e-25 118.6 166 43.4
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 4.5e-25 118.6 166 43.4
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 5.9e-25 118.2 166 43.4
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.0e-24 117.5 169 43.2
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.7e-24 116.7 166 43.4
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 2.2e-24 116.3 170 43.5
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 2.2e-24 116.3 170 43.5
Peaxi162Scf01097g00025 Petunia axillaris HOM05D005769 ORTHO05D006851 2.9e-24 115.9 165 40.6
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 2.9e-24 115.9 170 45.3
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 2.9e-24 115.9 173 43.4
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.1e-23 114.0 170 42.9
PGSC0003DMG400001093 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.1e-23 114.0 165 40.6
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 4.2e-23 112.1 180 44.4
Aa31LG3G10760 Aethionema arabicum HOM05D005769 ORTHO05D006851 7.2e-23 111.3 167 41.9
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 7.2e-23 111.3 179 44.7
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 2.1e-22 109.8 171 44.4
Nitab4.5_0013016g0010 Nicotiana tabacum HOM05D005769 ORTHO05D006851 4.7e-22 108.6 157 42.0
Nitab4.5_0000397g0340 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.0e-21 107.5 168 40.5
AT5G54850 Arabidopsis thaliana HOM05D005769 ORTHO05D006851 1.4e-21 107.1 211 38.4
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 1.8e-21 106.7 163 41.1
CAN.G337.106 Capsicum annuum HOM05D005769 ORTHO05D006851 4.0e-21 105.5 166 41.6
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 4.0e-21 105.5 166 39.8
AL8G30290 Arabidopsis lyrata HOM05D005769 ORTHO05D006851 8.8e-21 104.4 211 37.9
MSTRG.6907 Avicennia marina HOM05D005769 ORTHO05D006851 2.0e-20 103.2 164 37.8
unitig_0.g2389 Utricularia gibba HOM05D005769 ORTHO05D006851 2.6e-20 102.8 164 39.6
Cc05_g13510 Coffea canephora HOM05D005769 ORTHO05D006851 9.8e-20 100.9 168 38.7
PSO541G5959 Papaver somniferum HOM05D005769 ORTHO05D006851 9.8e-20 100.9 185 42.2
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 9.8e-20 100.9 166 40.4
BcaC04g20292 Brassica carinata HOM05D005769 ORTHO05D006851 1.7e-19 100.1 188 39.4
BolC9t57410H Brassica oleracea HOM05D005769 ORTHO05D006851 1.7e-19 100.1 188 39.4
PGSC0003DMG400013920 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.7e-19 100.1 165 38.2
CARHR268180 Cardamine hirsuta HOM05D005769 ORTHO05D006851 2.8e-19 99.4 187 39.6
Migut.M01783 Erythranthe guttata HOM05D005769 ORTHO05D006851 2.8e-19 99.4 164 39.6
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 2.8e-19 99.4 170 41.8
Solyc07g064320.3 Solanum lycopersicum HOM05D005769 ORTHO05D006851 2.8e-19 99.4 165 38.2
C09p45400 Brassica napus HOM05D005769 ORTHO05D006851 4.9e-19 98.6 188 38.8
Migut.H01842 Erythranthe guttata HOM05D005769 ORTHO05D006851 4.9e-19 98.6 170 38.8
BraA10t43314Z Brassica rapa HOM05D005769 ORTHO05D006851 6.3e-19 98.2 188 38.8
AUR62020499 Chenopodium quinoa HOM05D005769 ORTHO05D006851 6.3e-19 98.2 170 37.6
Sopen07g032470 Solanum pennellii HOM05D005769 ORTHO05D006851 6.3e-19 98.2 165 38.2
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea HOM05D005769 ORTHO05D006851 1.1e-18 97.4 164 39.0
BcaB08g35851 Brassica carinata HOM05D005769 ORTHO05D006851 1.8e-18 96.7 188 36.7
Glyma.09G100100 Glycine max HOM05D005769 ORTHO05D006851 1.8e-18 96.7 159 39.6
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 1.8e-18 96.7 167 38.3
Sp6g16810 Schrenkiella parvula HOM05D005769 ORTHO05D006851 4.1e-18 95.5 191 37.7
AUR62015707 Chenopodium quinoa HOM05D005769 ORTHO05D006851 7.0e-18 94.7 168 39.3
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 1.2e-17 94.0 143 39.9
A10p12180 Brassica napus HOM05D005769 ORTHO05D006851 2.0e-17 93.2 207 34.3
Carub.0008s1514 Capsella rubella HOM05D005769 ORTHO05D006851 3.5e-17 92.4 180 37.2
ECA236G2121 Erigeron canadensis HOM05D005769 ORTHO05D006851 3.5e-17 92.4 176 38.1
SalBow7G1695 Salvia bowleyana HOM05D005769 ORTHO05D006851 4.5e-17 92.0 168 41.1
Thhalv10014809m.g Eutrema salsugineum HOM05D005769 ORTHO05D006851 5.9e-17 91.7 187 37.4
Oeu062604.3 Olea europaea HOM05D005769 ORTHO05D006851 5.9e-17 91.7 142 40.8
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 1.7e-16 90.1 174 35.6
HanXRQChr11g0336271 Helianthus annuus HOM05D005769 ORTHO05D006851 2.3e-16 89.7 162 38.9
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 7.3e-15 84.7 136 38.2
Psat2g015240 Pisum sativum HOM05D005769 ORTHO05D006851 7.3e-15 84.7 178 37.6
Sc16g0006260 Simmondsia chinensis HOM05D005769 ORTHO05D006851 7.3e-15 84.7 203 35.5
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 9.5e-15 84.3 170 34.7
Phvul.006G038800 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 9.5e-15 84.3 165 37.6
SGA_v2.0_scaffold8G04301 Striga asiatica HOM05D005769 ORTHO05D006851 1.0e-13 80.9 169 34.9
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 1.4e-13 80.5 151 32.5
ECA234G1543 Erigeron canadensis HOM05D005769 ORTHO05D006851 1.4e-13 80.5 157 35.7
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 6.8e-13 78.2 162 35.8
ATR0752G130 Amborella trichopoda HOM05D005769 ORTHO05D006851 6.8e-13 78.2 193 34.2
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 1.2e-12 77.4 155 41.9
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 4.4e-12 75.5 163 33.1
HPP92_014114 Vanilla planifolia HOM05D005769 ORTHO05D006851 4.4e-12 75.5 168 38.1
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 5.7e-12 75.1 162 32.7
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 7.5e-12 74.7 157 36.9
Zm00001eb322840 Zea mays HOM05D005769 ORTHO05D006851 7.5e-12 74.7 170 37.1
Lsat_1_v5_gn_5_125321 Lactuca sativa HOM05D005769 ORTHO05D006851 6.4e-11 71.6 170 31.2
HanXRQChr05g0159131 Helianthus annuus HOM05D005769 ORTHO05D006851 1.8e-10 70.1 168 35.7
Lalb_Chr10g0106921 Lupinus albus HOM05D005769 ORTHO05D006851 2.4e-10 69.7 130 36.9
Cc05_g04810 Coffea canephora HOM05D005769 ORTHO05D006851 5.0e-08 62.0 159 32.7
HPP92_012322 Vanilla planifolia HOM05D005769 ORTHO05D006851 9.5e-07 57.8 157 31.8
HPP92_012395 Vanilla planifolia HOM05D005769 ORTHO05D006851 2.1e-06 56.6 157 31.8
Oeu021395.2 Olea europaea HOM05D005769 ORTHO05D006851 8.0e-06 54.7 61 49.2


User provided reference genes

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