Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G014250 Citrullus lanatus HOM05D005009 ORTHO05D006203 2.1e-79 298.9 145 100.0
CsaV3_5G036940 Cucumis sativus L. HOM05D005009 ORTHO05D006203 4.3e-56 221.5 158 71.5
ClCG05G027020 Citrullus lanatus HOM05D005009 ORTHO05D006203 1.4e-54 216.5 158 69.6
MELO3C034019.2 Cucumis melo HOM05D005009 ORTHO05D006203 5.2e-54 214.5 165 68.5
RcHm_v2.0_Chr1g0327201 Rosa chinensis HOM05D005009 ORTHO05D006203 7.6e-53 210.7 158 67.1
FvH4_7g03830 Fragaria vesca HOM05D005009 ORTHO05D006203 9.9e-53 210.3 158 67.1
FAN03G3221 Fragaria x ananassa HOM05D005009 ORTHO05D006203 9.9e-53 210.3 158 67.1
FAN06G1190 Fragaria x ananassa HOM05D005009 ORTHO05D006203 9.9e-53 210.3 158 67.1
Manes.11G007500 Manihot esculenta HOM05D005009 ORTHO05D006203 1.3e-52 209.9 158 66.5
Lj3g0027433 Lotus japonicus HOM05D005009 ORTHO05D006203 1.7e-52 209.5 158 65.8
Phvul.011G192750 Phaseolus vulgaris HOM05D005009 ORTHO05D006203 1.7e-52 209.5 158 66.5
QL04p021447 Quercus lobata HOM05D005009 ORTHO05D006203 1.7e-52 209.5 158 66.5
QL07p029267 Quercus lobata HOM05D005009 ORTHO05D006203 1.7e-52 209.5 158 66.5
Medtr8g040630 Medicago truncatula HOM05D005009 ORTHO05D006203 2.9e-52 208.8 158 66.5
AUR62031741 Chenopodium quinoa HOM05D005009 ORTHO05D006203 3.8e-52 208.4 158 65.8
Haze_02993 Corylus avellana HOM05D005009 ORTHO05D006203 3.8e-52 208.4 158 66.5
Atru.chr12.1310 Acer truncatum HOM05D005009 ORTHO05D006203 4.9e-52 208.0 158 65.8
Actinidia06220 Actinidia chinensis HOM05D005009 ORTHO05D006203 4.9e-52 208.0 158 65.2
EL10Ac2g02762 Beta vulgaris HOM05D005009 ORTHO05D006203 4.9e-52 208.0 158 65.2
CSS0011052 Camellia sinensis var. sinensis HOM05D005009 ORTHO05D006203 4.9e-52 208.0 158 65.8
FAN10G3328 Fragaria x ananassa HOM05D005009 ORTHO05D006203 4.9e-52 208.0 158 66.5
TPR.G8532 Trifolium pratense HOM05D005009 ORTHO05D006203 4.9e-52 208.0 158 65.8
Dinv32009 Davidia involucrata HOM05D005009 ORTHO05D006203 6.4e-52 207.6 158 67.1
CiPaw.14G009400 Carya illinoinensis HOM05D005009 ORTHO05D006203 1.1e-51 206.8 158 66.5
Hund13390 Selenicereus undatus HOM05D005009 ORTHO05D006203 1.1e-51 206.8 158 65.8
Psat4g146480 Pisum sativum HOM05D005009 ORTHO05D006203 1.4e-51 206.5 158 65.2
PGR031G2406 Punica granatum HOM05D005009 ORTHO05D006203 1.4e-51 206.5 158 64.6
Prupe.2G043300 Prunus persica HOM05D005009 ORTHO05D006203 1.9e-51 206.1 158 65.2
TWI15G1146 Tripterygium wilfordii HOM05D005009 ORTHO05D006203 1.9e-51 206.1 158 65.2
AUR62032626 Chenopodium quinoa HOM05D005009 ORTHO05D006203 2.4e-51 205.7 158 64.6
Gohir.A03G073900 Gossypium hirsutum HOM05D005009 ORTHO05D006203 2.4e-51 205.7 158 63.9
Gohir.D03G100300 Gossypium hirsutum HOM05D005009 ORTHO05D006203 2.4e-51 205.7 158 63.9
Gorai.003G105400 Gossypium raimondii HOM05D005009 ORTHO05D006203 2.4e-51 205.7 158 63.9
Thecc.03G114300 Theobroma cacao HOM05D005009 ORTHO05D006203 2.4e-51 205.7 158 63.9
COL.COLO4_32171 Corchorus olitorius HOM05D000011 ORTHO05D006203 3.2e-51 205.3 158 63.9
Eucgr.E03953 Eucalyptus grandis HOM05D005009 ORTHO05D006203 3.2e-51 205.3 158 63.9
Potri.003G193900 Populus trichocarpa HOM05D005009 ORTHO05D006203 4.1e-51 204.9 158 65.8
Zm00001eb317990 Zea mays HOM05D005009 ORTHO05D006203 4.1e-51 204.9 158 63.3
Aqoxy2G00437 Aquilegia oxysepala HOM05D005009 ORTHO05D006203 5.4e-51 204.5 158 65.8
Ciclev10002585m.g Citrus clementina HOM05D005009 ORTHO05D006203 5.4e-51 204.5 158 64.6
MBI19_g37444_MAGBIO Magnolia biondii HOM05D005009 ORTHO05D006203 5.4e-51 204.5 165 61.8
Rhsim07G0069300 Rhododendron simsii HOM05D005009 ORTHO05D006203 5.4e-51 204.5 185 56.8
Sed0026819 Sechium edule HOM05D005009 ORTHO05D006203 5.4e-51 204.5 184 59.8
Duzib084G0080 Durio zibethinus HOM05D005009 ORTHO05D006203 7.1e-51 204.1 158 63.9
Ca_24007_v3 Cicer arietinum L. HOM05D005009 ORTHO05D006203 9.2e-51 203.8 158 63.9
Ah.01g018000 Amaranthus hybridus HOM05D005009 ORTHO05D006203 1.2e-50 203.4 158 65.2
arahy.Tifrunner.gnm1.ann1.CDA2TW Arachis hypogaea HOM05D005009 ORTHO05D006203 1.2e-50 203.4 180 58.9
Dinv11234 Davidia involucrata HOM05D005009 ORTHO05D006203 1.2e-50 203.4 158 65.2
Lalb_Chr19g0132931 Lupinus albus HOM05D005009 ORTHO05D006203 1.2e-50 203.4 158 63.9
GSVIVG01036607001 Vitis vinifera HOM05D005009 ORTHO05D006203 1.2e-50 203.4 158 65.8
ATR0307G112 Amborella trichopoda HOM05D005009 ORTHO05D006203 1.6e-50 203.0 158 63.9
Glyma.09G090300 Glycine max HOM05D005009 ORTHO05D006203 2.7e-50 202.2 158 64.6
Duzib068G0995 Durio zibethinus HOM05D005009 ORTHO05D006203 4.6e-50 201.4 158 63.3
CDE08G1579 Ceratophyllum demersum HOM05D005009 ORTHO05D006203 6.0e-50 201.1 158 62.7
Sabra03G0144600 Salix brachista HOM05D005009 ORTHO05D006203 6.0e-50 201.1 170 60.0
DCAR_006603 Daucus carota HOM05D005009 ORTHO05D006203 7.8e-50 200.7 158 63.9
Hma1.2p1_0837F.1_g226250 Hydrangea macrophylla HOM05D005009 ORTHO05D006203 7.8e-50 200.7 171 59.6
MBI19_g44926_MAGBIO Magnolia biondii HOM05D005009 ORTHO05D006203 7.8e-50 200.7 157 64.3
Nitab4.5_0002838g0060 Nicotiana tabacum HOM05D005009 ORTHO05D006203 7.8e-50 200.7 158 63.9
GSVIVG01028667001 Vitis vinifera HOM05D005009 ORTHO05D006203 7.8e-50 200.7 158 65.8
Eucgr.G03210 Eucalyptus grandis HOM05D005009 ORTHO05D006203 1.0e-49 200.3 158 63.9
PSO384G0249 Papaver somniferum HOM05D005009 ORTHO05D006203 1.3e-49 199.9 158 64.6
PSO339G0131 Papaver somniferum HOM05D005009 ORTHO05D006203 1.7e-49 199.5 158 65.2
THA.LOC104826749 Tarenaya hassleriana HOM05D005009 ORTHO05D006203 2.3e-49 199.1 158 62.0
Cc03_g14060 Coffea canephora HOM05D005009 ORTHO05D006203 3.0e-49 198.7 158 65.8
CANSAT01G2494 Cannabis sativa HOM05D005009 ORTHO05D006203 5.1e-49 198.0 158 63.3
Lsat_1_v5_gn_1_117041 Lactuca sativa HOM05D005009 ORTHO05D006203 5.1e-49 198.0 158 62.7
ECA248G2538 Erigeron canadensis HOM05D005009 ORTHO05D006203 6.6e-49 197.6 158 62.7
TAR633G2352 Trochodendron aralioides HOM05D005009 ORTHO05D006203 6.6e-49 197.6 158 63.3
Nn7g36825 Nelumbo nucifera HOM05D005009 ORTHO05D006203 8.7e-49 197.2 158 62.7
Solyc01g096610.4 Solanum lycopersicum HOM05D005009 ORTHO05D006203 8.7e-49 197.2 158 62.0
Sopen01g040340 Solanum pennellii HOM05D005009 ORTHO05D006203 8.7e-49 197.2 158 62.0
PGSC0003DMG401003286 Solanum tuberosum HOM05D005009 ORTHO05D006203 8.7e-49 197.2 158 62.0
Migut.B01192 Erythranthe guttata HOM05D005009 ORTHO05D006203 2.5e-48 195.7 158 61.4
Carub.0003s1167 Capsella rubella HOM05D005009 ORTHO05D006203 3.3e-48 195.3 158 63.3
SGA_v2.0_scaffold408G51079 Striga asiatica HOM05D005009 ORTHO05D006203 4.3e-48 194.9 158 62.7
SEGI_18977 Sequoiadendron giganteum HOM05D005009 ORTHO05D006203 5.6e-48 194.5 158 62.7
AL3G23960 Arabidopsis lyrata HOM05D005009 ORTHO05D006203 9.6e-48 193.7 158 62.0
MSTRG.20500 Avicennia marina HOM05D005009 ORTHO05D006203 1.2e-47 193.4 158 61.4
arahy.Tifrunner.gnm1.ann1.SBUN5C Arachis hypogaea HOM05D005009 ORTHO05D006203 2.8e-47 192.2 199 53.8
BolC1t05245H Brassica oleracea HOM05D005009 ORTHO05D006203 2.8e-47 192.2 158 61.4
Thhalv10021577m.g Eutrema salsugineum HOM05D005009 ORTHO05D006203 2.8e-47 192.2 158 61.4
AT3G12300 Arabidopsis thaliana HOM05D005009 ORTHO05D006203 3.6e-47 191.8 158 61.4
C01p53010 Brassica napus HOM05D005009 ORTHO05D006203 3.6e-47 191.8 158 61.4
Sp3g10520 Schrenkiella parvula HOM05D005009 ORTHO05D006203 3.6e-47 191.8 158 61.4
BolC3t16835H Brassica oleracea HOM05D005009 ORTHO05D006203 6.2e-47 191.0 158 61.4
unitig_22.g5330 Utricularia gibba HOM05D005009 ORTHO05D006203 8.1e-47 190.7 163 62.0
BcaB04g18685 Brassica carinata HOM05D005009 ORTHO05D006203 1.1e-46 190.3 158 60.8
HanXRQChr11g0341231 Helianthus annuus HOM05D005009 ORTHO05D006203 1.1e-46 190.3 158 61.4
A03p37590 Brassica napus HOM05D005009 ORTHO05D006203 1.4e-46 189.9 158 60.8
BcaC01g04053 Brassica carinata HOM05D005009 ORTHO05D006203 2.4e-46 189.1 158 60.1
C03p45580 Brassica napus HOM05D005009 ORTHO05D006203 2.4e-46 189.1 158 60.1
Pp3c16_8300 Physcomitrium patens HOM05D005009 ORTHO05D006203 2.4e-46 189.1 158 57.0
HPP92_011758 Vanilla planifolia HOM05D005009 ORTHO05D006203 4.0e-46 188.3 126 69.8
A06p13990 Brassica napus HOM05D005009 ORTHO05D006203 9.0e-46 187.2 158 60.1
BcaC09g48230 Brassica carinata HOM05D005009 ORTHO05D006203 1.2e-45 186.8 158 60.1
Mapoly0109s0062 Marchantia polymorpha HOM05D005009 ORTHO05D006203 5.8e-45 184.5 158 57.0
Cre07.g351650 Chlamydomonas reinhardtii HOM05D005009 ORTHO05D006203 2.2e-44 182.6 158 56.3
AagrBONN_evm.TU.Sc2ySwM_340.215 Anthoceros agrestis HOM05D005009 ORTHO05D006203 4.9e-44 181.4 158 57.0
Pp3c25_460 Physcomitrium patens HOM05D005009 ORTHO05D006203 8.4e-44 180.6 135 63.7
SMO137G0355 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 1.9e-43 179.5 158 54.4
PRCOL_00001494 Prasinoderma coloniale HOM05D005009 ORTHO05D006203 4.6e-42 174.9 158 53.2
vmacro21942 Vaccinium macrocarpon HOM05D005009 ORTHO05D006203 4.6e-42 174.9 151 58.9
vmacro23458 Vaccinium macrocarpon HOM05D005009 ORTHO05D006203 4.6e-42 174.9 151 58.9
Pp3c7_7130 Physcomitrium patens HOM05D005009 ORTHO05D006203 3.9e-41 171.8 159 52.8
MCO01G737 Micromonas commoda HOM05D005009 ORTHO05D006203 1.1e-40 170.2 158 51.9
Os09g0510200 Oryza sativa ssp. japonica HOM05D005009 ORTHO05D006203 3.3e-40 168.7 140 57.9
Sed0013386 Sechium edule HOM05D005009 ORTHO05D006203 9.6e-40 167.2 180 55.0
SMO137G0211 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 9.6e-40 167.2 158 51.9
Lj9A658G62 Lonicera japonica HOM05D005009 ORTHO05D006203 2.1e-39 166.0 123 65.0
Peaxi162Scf00220g00315 Petunia axillaris HOM05D005009 ORTHO05D006203 2.8e-39 165.6 140 59.3
Aa31LG3G6530 Aethionema arabicum HOM05D005009 ORTHO05D006203 1.1e-38 163.7 145 56.6
VMungo1127G1850 Vigna mungo HOM05D005009 ORTHO05D006203 7.6e-37 157.5 137 59.1
SHI34551 Sapria himalayana HOM05D005009 ORTHO05D006203 1.1e-35 153.7 130 60.0
CSS0003702 Camellia sinensis var. sinensis HOM05D005009 ORTHO05D006203 1.4e-35 153.3 130 60.0
Cpa.g.sc82.9 Carica papaya HOM05D005009 ORTHO05D006203 2.4e-35 152.5 130 60.0
Glyma.13G184700 Glycine max HOM05D005009 ORTHO05D006203 1.6e-31 139.8 128 55.5
Haze_26638 Corylus avellana HOM05D005009 ORTHO05D006203 4.5e-29 131.7 161 45.3
SMO232G0039 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 4.5e-29 131.7 158 43.7
Glyma.13G188400 Glycine max HOM05D005009 ORTHO05D006203 6.4e-28 127.9 129 54.3
MD02G1276800 Malus domestica HOM05D005009 ORTHO05D006203 6.4e-28 127.9 82 75.6
HPP92_011756 Vanilla planifolia HOM05D005009 ORTHO05D006203 4.6e-26 121.7 83 71.1
Nitab4.5_0004168g0130 Nicotiana tabacum HOM05D005009 ORTHO05D006203 7.9e-26 120.9 83 69.9
CAN.G134.28 Capsicum annuum HOM05D005009 ORTHO05D006203 1.0e-25 120.6 179 39.1
Prupe.3G123900 Prunus persica HOM05D005009 ORTHO05D006203 1.2e-21 107.1 77 72.7
Actinidia07967 Actinidia chinensis HOM05D005009 ORTHO05D006203 3.4e-21 105.5 135 48.1
Cfa001149 Carpinus fangiana HOM05D005009 ORTHO05D006203 2.2e-20 102.8 59 74.6
MD02G1276900 Malus domestica HOM05D005009 ORTHO05D006203 8.4e-20 100.9 49 87.8
SMO352G0037 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 8.4e-20 100.9 177 35.0
Glyma.13G192001 Glycine max HOM05D005009 ORTHO05D006203 1.6e-18 96.7 49 81.6
HPP92_011747 Vanilla planifolia HOM05D005009 ORTHO05D006203 6.0e-18 94.7 49 79.6
CDE08G0779 Ceratophyllum demersum HOM05D005009 ORTHO05D006203 1.0e-17 94.0 49 75.5
BraA03t12913Z Brassica rapa HOM05D005009 ORTHO05D006203 2.3e-17 92.8 49 77.6
Manes.04G156350 Manihot esculenta HOM05D005009 ORTHO05D006203 2.3e-17 92.8 52 75.0
arahy.Tifrunner.gnm1.ann1.WDN55T Arachis hypogaea HOM05D000001 ORTHO05D009381 8.7e-17 90.9 46 82.6
Oeu064146.2 Olea europaea HOM05D005009 ORTHO05D006203 5.7e-16 88.2 48 75.0
Glyma.13G190100 Glycine max HOM05D005009 ORTHO05D006203 5.3e-14 81.6 41 82.9
Glyma.13G188051 Glycine max HOM05D005009 ORTHO05D006203 1.5e-13 80.1 59 62.7
MD07G1044300 Malus domestica HOM05D005009 ORTHO05D006203 2.2e-12 76.3 38 86.8
CARHR086850 Cardamine hirsuta HOM05D005009 ORTHO05D006203 6.5e-12 74.7 38 81.6
BolC1t05246H Brassica oleracea HOM05D005009 ORTHO05D006203 2.5e-11 72.8 38 78.9
Sc11g0006340 Simmondsia chinensis HOM05D005009 ORTHO05D006203 2.5e-11 72.8 55 61.8
BcaC09g48229 Brassica carinata HOM05D005009 ORTHO05D006203 1.2e-10 70.5 38 76.3
C01p53030 Brassica napus HOM05D005009 ORTHO05D006203 1.2e-10 70.5 38 76.3
Pp3c6_12450 Physcomitrium patens HOM05D005009 ORTHO05D006203 1.1e-06 57.4 125 30.4


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