Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G014110 Citrullus lanatus HOM05D007877 ORTHO05D009957 2.0e-178 629.0 329 100.0
AUR62026822 Chenopodium quinoa HOM05D000743 ORTHO05D000580 1.5e-16 91.3 90 62.2
SHI55214 Sapria himalayana HOM05D007877 ORTHO05D009957 1.1e-11 75.1 46 84.8
Solyc00g500168.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 4.3e-11 73.2 45 86.7
Solyc00g500237.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 4.3e-11 73.2 45 86.7
Solyc00g500346.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 4.3e-11 73.2 45 86.7
Solyc00g500357.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 4.3e-11 73.2 45 86.7
Nitab4.5_0009703g0110 Nicotiana tabacum HOM05D007877 ORTHO05D009957 7.3e-11 72.4 45 84.4
C04p19590 Brassica napus HOM05D007877 ORTHO05D009957 9.5e-11 72.0 48 77.1
BraSC48t46272Z Brassica rapa HOM05D007877 ORTHO05D009957 9.5e-11 72.0 48 77.1
CARHR282940 Cardamine hirsuta HOM05D007877 ORTHO05D009957 9.5e-11 72.0 48 77.1
ATMG00570 Arabidopsis thaliana HOM05D007877 ORTHO05D009957 1.2e-10 71.6 48 77.1
RcHm_v2.0_MTg0499111 Rosa chinensis HOM05D007877 ORTHO05D009957 1.2e-10 71.6 45 84.4
BraSC177t45764Z Brassica rapa HOM05D007877 ORTHO05D009957 1.6e-10 71.2 45 82.2
CAN.G1159.16 Capsicum annuum HOM05D007877 ORTHO05D009957 1.6e-10 71.2 44 86.4
DCAR_032450 Daucus carota HOM05D007877 ORTHO05D009957 2.1e-10 70.9 45 84.4
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 2.1e-10 70.9 44 84.1
BolC4t23493H Brassica oleracea HOM05D007877 ORTHO05D009957 2.8e-10 70.5 48 75.0
CANSAT16G0008 Cannabis sativa HOM05D007877 ORTHO05D009957 2.8e-10 70.5 45 84.4
Nitab4.5_0004471g0150 Nicotiana tabacum HOM05D007877 ORTHO05D009957 6.2e-10 69.3 45 84.4
AUR62042354 Chenopodium quinoa HOM05D000743 ORTHO05D000580 8.1e-10 68.9 45 82.2
AUR62043788 Chenopodium quinoa HOM05D000743 ORTHO05D000580 8.1e-10 68.9 45 82.2
Lj2P1225T96 Lonicera japonica HOM05D007877 ORTHO05D009957 1.1e-09 68.6 45 82.2
Aa31csc239G30 Aethionema arabicum HOM05D007877 ORTHO05D009957 2.3e-09 67.4 48 72.9
RhsimMtG0001700 Rhododendron simsii HOM05D007877 ORTHO05D009957 5.2e-09 66.2 45 80.0
RhsimMtG0004900 Rhododendron simsii HOM05D007877 ORTHO05D009957 5.2e-09 66.2 45 80.0
Nn1g10077 Nelumbo nucifera HOM05D007877 ORTHO05D009957 6.8e-09 65.9 45 80.0
Nn1g10099 Nelumbo nucifera HOM05D007877 ORTHO05D009957 6.8e-09 65.9 45 80.0
TAR371G0168 Trochodendron aralioides HOM05D007877 ORTHO05D009957 6.8e-09 65.9 45 80.0
Zm00001eb436210 Zea mays HOM05D007877 ORTHO05D009957 1.5e-08 64.7 45 77.8
Zm00001eb436260 Zea mays HOM05D007877 ORTHO05D009957 1.5e-08 64.7 45 77.8
Zm00001eb436450 Zea mays HOM05D007877 ORTHO05D009957 1.5e-08 64.7 45 77.8
Zm00001eb436490 Zea mays HOM05D007877 ORTHO05D009957 1.5e-08 64.7 45 77.8
Zm00001eb441030 Zea mays HOM05D007877 ORTHO05D009957 1.5e-08 64.7 45 77.8
HanXRQChr00c0055g0571431 Helianthus annuus HOM05D007877 ORTHO05D009957 3.4e-08 63.5 44 79.5
HanXRQChr00c0234g0572751 Helianthus annuus HOM05D007877 ORTHO05D009957 3.4e-08 63.5 44 79.5
HanXRQMTg0579501 Helianthus annuus HOM05D007877 ORTHO05D009957 3.4e-08 63.5 44 79.5
Lsat_1_v5_gn_2_125060 Lactuca sativa HOM05D007877 ORTHO05D009957 3.4e-08 63.5 44 79.5
Solyc10g062070.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 5.8e-08 62.8 45 75.6
Aqoxy12s004 Aquilegia oxysepala HOM05D007877 ORTHO05D009957 2.9e-07 60.5 45 73.3
Aqoxy38s004 Aquilegia oxysepala HOM05D007877 ORTHO05D009957 2.9e-07 60.5 45 73.3
Aqoxy1G02979 Aquilegia oxysepala HOM05D007877 ORTHO05D009957 8.3e-07 58.9 45 71.1
BolC6t36215H Brassica oleracea HOM05D007877 ORTHO05D009957 1.1e-06 58.5 48 70.8


User provided reference genes

Program Settings