Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 1.3e-185 652.9 335 100.0
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 6.7e-161 570.9 333 88.3
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 8.4e-156 553.9 337 86.4
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 1.4e-142 510.0 300 88.7
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 4.1e-142 508.4 335 80.0
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 2.0e-133 479.6 343 74.1
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 1.3e-132 476.9 342 73.4
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 1.3e-132 476.9 335 72.8
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 1.3e-132 476.9 337 75.1
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 2.9e-132 475.7 342 72.5
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 7.2e-131 471.1 345 72.5
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 9.4e-131 470.7 336 72.9
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 3.9e-129 465.3 335 72.2
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 6.7e-129 464.5 339 72.0
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 6.7e-129 464.5 334 71.6
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 1.1e-128 463.8 307 74.9
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 1.5e-128 463.4 338 72.5
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 1.5e-128 463.4 312 75.6
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 2.0e-128 463.0 339 70.8
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 3.3e-128 462.2 343 70.8
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 3.3e-128 462.2 351 70.7
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 4.4e-128 461.8 278 82.0
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 7.4e-128 461.1 333 71.5
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 1.3e-127 460.3 334 73.1
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 1.3e-127 460.3 296 79.4
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 3.7e-127 458.8 342 71.6
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 3.7e-127 458.8 339 71.4
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 6.3e-127 458.0 343 70.3
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 1.8e-126 456.4 336 69.6
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.8e-126 456.4 336 69.9
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 2.4e-126 456.1 339 69.9
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.2e-125 453.8 329 71.4
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 2.6e-125 452.6 332 72.3
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 3.4e-125 452.2 336 70.2
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 3.4e-125 452.2 338 69.5
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 1.1e-123 447.2 347 69.5
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 1.4e-123 446.8 334 70.7
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 2.5e-123 446.0 308 75.6
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 3.2e-123 445.7 339 69.6
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 3.2e-123 445.7 340 70.3
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 3.2e-123 445.7 336 70.2
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 4.2e-123 445.3 335 69.9
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 5.5e-123 444.9 335 69.3
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 7.2e-123 444.5 335 69.3
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 9.4e-123 444.1 323 72.4
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 9.4e-123 444.1 343 68.2
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 9.4e-123 444.1 335 69.3
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 1.6e-122 443.4 332 67.8
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 1.6e-122 443.4 332 70.2
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 3.6e-122 442.2 320 71.2
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 6.1e-122 441.4 332 68.7
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 7.9e-122 441.0 273 79.9
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 7.9e-122 441.0 273 79.9
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 7.9e-122 441.0 331 71.0
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 7.9e-122 441.0 319 71.5
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 7.9e-122 441.0 346 66.8
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 1.4e-121 440.3 338 70.4
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 3.9e-121 438.7 335 69.3
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 5.2e-121 438.3 324 70.7
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 1.5e-120 436.8 332 68.4
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 1.5e-120 436.8 333 68.5
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 1.5e-120 436.8 334 70.1
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 1.5e-120 436.8 250 84.0
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 2.6e-120 436.0 334 70.4
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 4.4e-120 435.3 339 69.0
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 4.4e-120 435.3 339 69.0
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 5.7e-120 434.9 343 65.0
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 5.7e-120 434.9 351 66.7
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 9.7e-120 434.1 340 68.2
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 1.3e-119 433.7 250 82.8
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 1.3e-119 433.7 256 82.0
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 2.2e-119 433.0 335 67.5
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 2.2e-119 433.0 330 68.8
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 3.7e-119 432.2 333 68.8
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 3.7e-119 432.2 333 68.8
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 3.7e-119 432.2 332 68.1
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 4.8e-119 431.8 334 68.0
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 8.2e-119 431.0 335 66.9
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 1.4e-118 430.3 250 82.4
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 7.0e-118 427.9 339 68.4
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 9.1e-118 427.6 333 67.9
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 9.1e-118 427.6 334 66.8
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 1.2e-117 427.2 252 81.0
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 2.6e-117 426.0 265 79.2
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 3.5e-117 425.6 275 76.0
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 1.3e-116 423.7 416 57.0
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 2.2e-116 422.9 399 60.4
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 2.2e-116 422.9 250 81.6
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 2.9e-116 422.5 329 69.3
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 2.9e-116 422.5 304 71.7
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 3.8e-116 422.2 304 71.4
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 5.0e-116 421.8 350 64.3
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 8.5e-116 421.0 308 72.7
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 7.2e-115 417.9 280 75.7
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 1.0e-113 414.1 336 66.7
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 4.4e-112 408.7 304 71.7
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 4.8e-111 405.2 339 64.0
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 8.2e-111 404.4 337 64.4
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 1.2e-109 400.6 306 67.3
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 7.7e-109 397.9 252 76.2
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 1.0e-108 397.5 303 65.7
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 6.5e-108 394.8 301 66.4
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 5.2e-105 385.2 274 71.5
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 6.8e-105 384.8 300 66.7
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 8.8e-105 384.4 344 65.1
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 2.8e-103 379.4 248 73.4
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 2.7e-101 372.9 316 60.8
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 4.7e-98 362.1 350 59.7
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 3.0e-97 359.4 342 59.1
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 6.8e-89 331.6 237 72.2
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 1.3e-87 327.4 318 54.1
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 1.7e-87 327.0 332 53.3
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 7.3e-83 311.6 346 54.9
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 5.6e-67 258.8 217 65.0
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 4.9e-63 245.7 208 63.0
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 1.4e-62 244.2 150 76.7
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 2.7e-61 240.0 210 62.9
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 5.1e-60 235.7 268 45.1
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 6.6e-60 235.3 236 50.8
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 3.6e-58 229.6 261 45.6
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 4.7e-58 229.2 182 68.1
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 1.8e-57 227.3 202 61.9
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 4.4e-56 222.6 127 85.8
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 4.4e-56 222.6 127 85.8
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 1.3e-55 221.1 263 43.0
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 3.5e-53 213.0 125 84.0
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 1.1e-51 208.0 170 65.3
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 2.4e-49 200.3 310 38.1
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 9.0e-49 198.4 109 85.3
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 6.2e-42 175.6 236 37.7
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 4.2e-38 162.9 246 36.6
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 1.5e-35 154.5 91 84.6
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 2.5e-35 153.7 100 75.0
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 1.1e-30 138.3 120 63.3
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 1.6e-29 134.4 215 34.4
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 1.0e-28 131.7 116 61.2
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 1.6e-26 124.4 65 89.2
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 6.3e-26 122.5 65 87.7
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 1.4e-25 121.3 65 87.7
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 2.2e-23 114.0 100 61.0
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 6.5e-23 112.5 104 64.4
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 6.5e-23 112.5 104 64.4
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 6.5e-23 112.5 104 64.4
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 4.3e-19 99.8 57 82.5
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 1.7e-18 97.8 50 90.0
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 3.7e-18 96.7 154 37.7
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 5.3e-17 92.8 92 56.5
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 9.1e-17 92.0 52 84.6
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 2.9e-15 87.0 47 85.1
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 9.4e-14 82.0 47 83.0
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 3.0e-12 77.0 160 35.0
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 4.4e-11 73.2 46 71.7
CSS0048304 Camellia sinensis var. sinensis HOM05D007623 ORTHO05D009641 4.2e-06 56.6 59 55.9


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