Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G012360 Citrullus lanatus HOM05D000014 ORTHO05D000016 4.0e-53 211.1 101 100.0
ClCG05G014140 Citrullus lanatus HOM05D000014 ORTHO05D000016 7.9e-25 117.1 151 45.7
ClCG04G002730 Citrullus lanatus HOM05D000014 ORTHO05D000016 1.7e-22 109.4 170 40.6
ClCG07G006620 Citrullus lanatus HOM05D021435 ORTHO05D022395 9.1e-21 103.6 103 55.3
ClCG08G004890 Citrullus lanatus HOM05D000014 ORTHO05D000016 1.6e-17 92.8 137 43.8
ClCG04G003930 Citrullus lanatus HOM05D000014 ORTHO05D000016 4.1e-13 78.2 50 74.0
ClCG09G015270 Citrullus lanatus HOM05D000014 ORTHO05D000016 5.9e-12 74.3 121 38.0
ClCG07G009550 Citrullus lanatus HOM05D013832 ORTHO05D000016 2.5e-10 68.9 138 38.4
CANSAT54G0792 Cannabis sativa HOM05D000014 ORTHO05D000016 7.2e-10 67.4 135 29.6
ClCG06G010250 Citrullus lanatus HOM05D000002 ORTHO05D000016 8.0e-09 63.9 52 59.6
CANSAT54G2205 Cannabis sativa HOM05D000014 ORTHO05D000016 1.4e-08 63.2 67 40.3
ClCG01G011700 Citrullus lanatus HOM05D000014 ORTHO05D000016 3.0e-08 62.0 49 61.2
Oeu015290.1 Olea europaea HOM05D000014 ORTHO05D000016 6.7e-08 60.8 66 50.0
Cpa.g.sc2026.3 Carica papaya HOM05D000014 ORTHO05D000016 8.8e-08 60.5 51 52.9
CANSAT78G1382 Cannabis sativa HOM05D000014 ORTHO05D000016 1.1e-07 60.1 70 40.0
Oeu025149.1 Olea europaea HOM05D000014 ORTHO05D000016 1.5e-07 59.7 66 47.0
QL09p053650 Quercus lobata HOM05D000014 ORTHO05D000093 1.5e-07 59.7 56 46.4
Manes.04G126412 Manihot esculenta HOM05D000014 ORTHO05D000016 2.0e-07 59.3 57 42.1
Oeu002512.1 Olea europaea HOM05D000014 ORTHO05D000016 2.0e-07 59.3 66 47.0
Oeu012463.1 Olea europaea HOM05D000014 ORTHO05D000016 2.0e-07 59.3 66 47.0
Oeu062184.1 Olea europaea HOM05D000014 ORTHO05D000016 2.0e-07 59.3 66 47.0
Oeu062556.1 Olea europaea HOM05D000014 ORTHO05D000016 2.0e-07 59.3 66 45.5
QL10p061586 Quercus lobata HOM05D000014 ORTHO05D000016 2.0e-07 59.3 56 46.4
ClCG04G001460 Citrullus lanatus HOM05D000014 ORTHO05D000016 2.6e-07 58.9 173 31.2
Oeu045340.1 Olea europaea HOM05D000014 ORTHO05D000016 2.6e-07 58.9 66 45.5
Manes.04G126538 Manihot esculenta HOM05D000014 ORTHO05D000016 3.3e-07 58.5 55 43.6
Oeu000300.1 Olea europaea HOM05D000014 ORTHO05D000016 3.3e-07 58.5 66 43.9
Oeu026335.1 Olea europaea HOM05D000014 ORTHO05D000016 3.3e-07 58.5 66 45.5
CANSAT64G2873 Cannabis sativa HOM05D000014 ORTHO05D000016 4.4e-07 58.2 86 34.9
Oeu011732.1 Olea europaea HOM05D000014 ORTHO05D000016 4.4e-07 58.2 80 41.2
Oeu012510.1 Olea europaea HOM05D000014 ORTHO05D000016 4.4e-07 58.2 53 52.8
Oeu017422.1 Olea europaea HOM05D000014 ORTHO05D000016 4.4e-07 58.2 53 52.8
Oeu032575.1 Olea europaea HOM05D000014 ORTHO05D000016 4.4e-07 58.2 66 47.0
TWI23G1083 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 4.4e-07 58.2 56 48.2
Atru.chr12.2468 Acer truncatum HOM05D000014 ORTHO05D000016 5.7e-07 57.8 53 52.8
Oeu053640.1 Olea europaea HOM05D000014 ORTHO05D000016 5.7e-07 57.8 66 45.5
CANSAT01G1394 Cannabis sativa HOM05D000014 ORTHO05D000016 7.5e-07 57.4 70 37.1
CANSAT21G0554 Cannabis sativa HOM05D000014 ORTHO05D000016 7.5e-07 57.4 67 40.3
Oeu064136.1 Olea europaea HOM05D000014 ORTHO05D000016 7.5e-07 57.4 50 52.0
TWI53G0394 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 7.5e-07 57.4 82 37.8
CANSAT11G1900 Cannabis sativa HOM05D000014 ORTHO05D000016 9.7e-07 57.0 67 38.8
CANSAT25G2186 Cannabis sativa HOM05D000014 ORTHO05D000016 9.7e-07 57.0 67 38.8
CANSAT56G2288 Cannabis sativa HOM05D000014 ORTHO05D000016 9.7e-07 57.0 67 38.8
CANSAT64G1133 Cannabis sativa HOM05D000014 ORTHO05D000016 9.7e-07 57.0 67 41.8
CANSAT78G1031 Cannabis sativa HOM05D000014 ORTHO05D000016 9.7e-07 57.0 67 38.8
CANSAT78G2236 Cannabis sativa HOM05D000014 ORTHO05D000016 9.7e-07 57.0 67 38.8
CANSAT80G0347 Cannabis sativa HOM05D000014 ORTHO05D000016 9.7e-07 57.0 67 38.8
TWI56G0355 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 9.7e-07 57.0 82 37.8
TWI74G0887 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 9.7e-07 57.0 54 48.1
CANSAT54G1842 Cannabis sativa HOM05D000014 ORTHO05D000016 1.3e-06 56.6 51 47.1
CANSAT80G0547 Cannabis sativa HOM05D000014 ORTHO05D000016 1.3e-06 56.6 56 41.1
Cpa.g.sc288.4 Carica papaya HOM05D000014 ORTHO05D000016 1.3e-06 56.6 44 56.8
Oeu007323.1 Olea europaea HOM05D000014 ORTHO05D000016 1.3e-06 56.6 66 43.9
CANSAT54G1954 Cannabis sativa HOM05D000569 ORTHO05D000418 1.7e-06 56.2 51 49.0
Oeu021836.2 Olea europaea HOM05D000014 ORTHO05D000016 1.7e-06 56.2 53 45.3
Oeu064802.1 Olea europaea HOM05D000014 ORTHO05D000016 1.7e-06 56.2 84 39.3
SHI49828 Sapria himalayana HOM05D000014 ORTHO05D000016 1.7e-06 56.2 54 48.1
Hund08890 Selenicereus undatus HOM05D000014 ORTHO05D000016 1.7e-06 56.2 71 39.4
TWI56G1009 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 1.7e-06 56.2 54 48.1
CSS0040149 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000093 2.2e-06 55.8 63 39.7
CANSAT35G0521 Cannabis sativa HOM05D000014 ORTHO05D000016 2.2e-06 55.8 54 48.1
CANSAT54G1893 Cannabis sativa HOM05D000014 ORTHO05D000016 2.8e-06 55.5 54 42.6
AUR62036886 Chenopodium quinoa HOM05D000014 ORTHO05D000016 2.8e-06 55.5 53 47.2
Manes.06G029160 Manihot esculenta HOM05D000014 ORTHO05D000016 2.8e-06 55.5 54 48.1
Oeu012344.1 Olea europaea HOM05D000014 ORTHO05D000016 2.8e-06 55.5 66 42.4
Oeu017629.1 Olea europaea HOM05D000014 ORTHO05D000016 2.8e-06 55.5 53 49.1
SHI47671 Sapria himalayana HOM05D000014 ORTHO05D000016 2.8e-06 55.5 53 49.1
CANSAT01G2079 Cannabis sativa HOM05D000014 ORTHO05D000016 3.7e-06 55.1 67 38.8
AUR62035266 Chenopodium quinoa HOM05D000014 ORTHO05D000016 3.7e-06 55.1 53 45.3
Manes.02G221020 Manihot esculenta HOM05D000014 ORTHO05D000016 3.7e-06 55.1 54 48.1
Manes.12G095501 Manihot esculenta HOM05D000014 ORTHO05D000016 3.7e-06 55.1 54 48.1
Oeu041701.1 Olea europaea HOM05D000014 ORTHO05D000016 3.7e-06 55.1 79 40.5
EL10Ac7g17900 Beta vulgaris HOM05D000014 ORTHO05D000016 4.8e-06 54.7 79 36.7
CANSAT78G1781 Cannabis sativa HOM05D000014 ORTHO05D000016 4.8e-06 54.7 67 37.3
Oeu062064.1 Olea europaea HOM05D000014 ORTHO05D000016 4.8e-06 54.7 95 33.7
PSO063G1156 Papaver somniferum HOM05D000014 ORTHO05D000016 4.8e-06 54.7 54 42.6
TWI81G1095 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 4.8e-06 54.7 53 47.2
Atru.chr2.2726 Acer truncatum HOM05D000014 ORTHO05D000016 6.3e-06 54.3 50 48.0
CSS0003442 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000093 6.3e-06 54.3 45 53.3
Oeu051743.1 Olea europaea HOM05D000014 ORTHO05D000016 6.3e-06 54.3 79 40.5
CSS0008445 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000093 8.2e-06 53.9 47 48.9
CANSAT11G1889 Cannabis sativa HOM05D000014 ORTHO05D000016 8.2e-06 53.9 67 35.8
CANSAT78G0106 Cannabis sativa HOM05D000014 ORTHO05D000016 8.2e-06 53.9 91 34.1
Ca_24172_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 8.2e-06 53.9 54 46.3


User provided reference genes

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