Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 6.7e-40 166.8 78 100.0
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 2.2e-38 161.8 78 93.6
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 5.0e-35 150.6 78 89.7
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 6.5e-35 150.2 78 85.9
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 3.2e-34 147.9 78 84.6
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 5.5e-34 147.1 78 83.3
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 7.2e-34 146.7 76 84.2
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 1.6e-33 145.6 78 83.3
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 3.6e-33 144.4 78 83.3
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 3.6e-33 144.4 78 82.1
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 4.7e-33 144.1 76 84.2
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 4.7e-33 144.1 76 86.8
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 4.7e-33 144.1 74 83.8
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 6.1e-33 143.7 75 85.3
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 6.1e-33 143.7 76 82.9
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 8.0e-33 143.3 76 82.9
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 8.0e-33 143.3 76 81.6
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 1.8e-32 142.1 78 80.8
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 1.8e-32 142.1 78 78.2
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 2.3e-32 141.7 78 80.8
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.3e-32 141.7 74 82.4
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 3.0e-32 141.4 78 78.2
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 3.0e-32 141.4 76 80.3
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 4.0e-32 141.0 77 80.5
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 1.2e-31 139.4 78 80.8
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 1.2e-31 139.4 76 78.9
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 2.6e-31 138.3 76 78.9
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 2.6e-31 138.3 73 83.6
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 2.6e-31 138.3 78 76.9
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 2.6e-31 138.3 78 76.9
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 3.4e-31 137.9 74 81.1
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 7.5e-31 136.7 72 83.3
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 9.8e-31 136.3 78 79.5
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 1.3e-30 136.0 76 77.6
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 1.7e-30 135.6 74 79.7
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 1.7e-30 135.6 74 79.7
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 1.7e-30 135.6 74 79.7
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 1.7e-30 135.6 76 77.6
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 2.2e-30 135.2 76 77.6
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 2.8e-30 134.8 74 79.7
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 3.7e-30 134.4 73 76.7
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 4.8e-30 134.0 69 84.1
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 4.8e-30 134.0 74 79.7
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 8.3e-30 133.3 74 77.0
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 1.1e-29 132.9 69 82.6
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 1.8e-29 132.1 73 78.1
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 3.1e-29 131.3 74 75.7
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 4.1e-29 131.0 73 78.1
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 7.0e-29 130.2 72 76.4
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 9.1e-29 129.8 78 69.2
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 9.1e-29 129.8 69 82.6
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 9.1e-29 129.8 73 75.3
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 1.2e-28 129.4 73 76.7
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 1.6e-28 129.0 71 78.9
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 1.6e-28 129.0 71 78.9
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 1.6e-28 129.0 77 72.7
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 3.5e-28 127.9 69 81.2
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 3.5e-28 127.9 72 75.0
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 4.5e-28 127.5 72 75.0
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 5.9e-28 127.1 78 75.6
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 7.7e-28 126.7 72 72.2
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 1.0e-27 126.3 73 74.0
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.2e-27 125.2 73 72.6
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 5.0e-27 124.0 78 70.5
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 8.5e-27 123.2 72 68.1
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.5e-26 122.5 72 73.6
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 3.2e-26 121.3 66 81.8
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 3.2e-26 121.3 72 70.8
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 4.2e-26 120.9 72 72.2
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 4.2e-26 120.9 78 73.1
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 9.4e-26 119.8 71 70.4
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 1.2e-25 119.4 70 72.9
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.2e-25 119.4 62 82.3
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 1.6e-25 119.0 72 70.8
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 1.6e-25 119.0 72 70.8
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 1.6e-25 119.0 72 70.8
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 1.6e-25 119.0 72 70.8
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.6e-25 119.0 72 72.2
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.6e-25 119.0 72 72.2
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 2.1e-25 118.6 72 70.8
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 2.1e-25 118.6 72 70.8
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 2.1e-25 118.6 72 70.8
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 2.1e-25 118.6 72 70.8
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 2.1e-25 118.6 72 70.8
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 2.7e-25 118.2 72 69.4
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 3.6e-25 117.9 72 69.4
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 6.1e-25 117.1 72 69.4
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 1.4e-24 115.9 72 69.4
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 1.4e-24 115.9 71 67.6
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 1.8e-24 115.5 71 66.2
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 1.8e-24 115.5 62 80.6
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.8e-24 115.5 74 63.5
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 3.0e-24 114.8 71 67.6
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 3.0e-24 114.8 72 69.4
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 4.0e-24 114.4 71 66.2
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 6.8e-24 113.6 67 71.6
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 6.8e-24 113.6 69 69.6
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 6.8e-24 113.6 69 69.6
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 1.2e-23 112.8 66 72.7
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 1.2e-23 112.8 66 72.7
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 1.2e-23 112.8 86 61.6
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.2e-23 112.8 74 59.5
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.2e-23 112.8 74 59.5
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.6e-23 111.7 74 59.5
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 7.5e-23 110.2 72 68.1
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 7.5e-23 110.2 74 59.5
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 9.8e-23 109.8 69 65.2
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.3e-22 109.4 69 63.8
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 2.8e-22 108.2 69 71.0
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.9e-22 107.5 74 55.4
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 4.9e-22 107.5 72 62.5
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 4.9e-22 107.5 72 62.5
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 4.9e-22 107.5 72 62.5
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 8.3e-22 106.7 72 62.5
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 2.4e-21 105.1 60 71.7
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 1.6e-20 102.4 74 51.4
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 3.5e-20 101.3 58 81.0
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 5.9e-20 100.5 65 64.6
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 5.0e-19 97.4 63 63.5
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 4.2e-18 94.4 48 81.2
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 1.2e-17 92.8 74 59.5
Cre13.g575701 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 9.5e-10 66.6 70 45.7
Cre03.g207152 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 1.6e-09 65.9 70 47.1
TAR371G0913 Trochodendron aralioides HOM05D006437 ORTHO05D007973 3.1e-08 61.6 31 80.6
Cre03.g207100 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 8.9e-08 60.1 71 38.0
TAR371G0323 Trochodendron aralioides HOM05D006437 ORTHO05D007973 8.9e-08 60.1 30 76.7


User provided reference genes

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