Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G010650 Citrullus lanatus HOM05D006674 ORTHO05D007954 3.9e-210 734.6 375 100.0
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 2.1e-131 473.0 276 88.8
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 1.3e-112 410.6 274 80.7
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 2.5e-84 316.6 336 53.9
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 4.0e-82 309.3 337 53.1
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 7.6e-81 305.1 329 53.5
Lj4C259T11 Lonicera japonica HOM05D006674 ORTHO05D007954 3.8e-80 302.8 336 50.9
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 1.2e-78 297.7 325 53.5
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 2.1e-78 297.0 172 89.5
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 2.7e-78 296.6 325 53.8
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 1.5e-76 290.8 280 59.3
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 7.4e-76 288.5 320 50.3
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 9.6e-76 288.1 282 56.7
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 2.8e-75 286.6 279 56.6
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 6.9e-74 282.0 322 50.0
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 1.2e-73 281.2 305 53.1
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 1.5e-73 280.8 328 49.7
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 2.2e-72 276.9 282 55.3
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 8.4e-72 275.0 317 48.9
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 1.1e-71 274.6 309 47.9
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 2.3e-69 266.9 338 48.5
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 5.1e-69 265.8 281 53.0
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 7.4e-68 261.9 282 52.5
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 1.1e-66 258.1 267 53.6
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 1.4e-66 257.7 283 52.3
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 1.4e-66 257.7 324 46.3
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 1.4e-66 257.7 284 50.7
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 3.1e-66 256.5 295 50.5
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 3.1e-66 256.5 278 52.2
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 5.3e-66 255.8 289 49.1
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 6.9e-66 255.4 298 48.0
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 1.2e-65 254.6 325 44.9
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 1.0e-64 251.5 350 44.9
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 1.7e-64 250.8 332 44.9
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 2.2e-64 250.4 330 44.8
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 6.5e-64 248.8 279 49.1
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 9.4e-63 245.0 353 42.2
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 1.6e-62 244.2 288 49.0
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 2.1e-62 243.8 295 47.1
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 2.7e-62 243.4 329 45.6
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 4.6e-62 242.7 326 46.0
Ca_17090_v3 Cicer arietinum L. HOM05D006674 ORTHO05D007954 3.0e-61 240.0 304 44.4
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 5.1e-61 239.2 373 42.1
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 1.1e-60 238.0 331 42.6
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 1.5e-60 237.7 261 51.3
CARHR215300 Cardamine hirsuta HOM05D006674 ORTHO05D007954 3.3e-60 236.5 326 43.6
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 9.7e-60 235.0 282 49.3
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 3.7e-59 233.0 277 50.2
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 6.3e-59 232.3 282 48.9
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 8.2e-59 231.9 284 47.9
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 1.1e-58 231.5 289 45.3
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 3.1e-58 229.9 283 45.9
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 6.9e-58 228.8 282 49.6
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 9.1e-58 228.4 278 46.8
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 9.1e-58 228.4 279 50.5
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 2.0e-57 227.3 275 46.5
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 4.5e-57 226.1 281 47.0
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 4.5e-57 226.1 316 45.3
CAN.G222.57 Capsicum annuum HOM05D006674 ORTHO05D007954 1.3e-56 224.6 274 48.5
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 1.7e-56 224.2 284 46.5
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 2.2e-56 223.8 188 64.9
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 3.8e-56 223.0 279 48.4
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 6.5e-56 222.2 297 44.4
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 5.5e-55 219.2 281 47.0
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 7.2e-55 218.8 285 46.3
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 2.7e-54 216.9 253 47.0
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 2.7e-54 216.9 239 52.7
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 4.7e-54 216.1 253 47.0
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 3.3e-52 209.9 237 52.3
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 2.2e-51 207.2 271 45.8
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 3.5e-49 199.9 228 50.9
ATR0753G123 Amborella trichopoda HOM05D006674 ORTHO05D007954 4.5e-49 199.5 266 44.4
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 6.5e-48 195.7 336 39.6
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 3.2e-47 193.4 178 56.7
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 2.6e-44 183.7 297 39.7
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 5.3e-42 176.0 300 39.0
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 3.7e-35 153.3 328 35.4
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 1.2e-33 148.3 132 56.8
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 2.9e-32 143.7 215 42.3
Cpa.g.sc340.5 Carica papaya HOM05D006674 ORTHO05D007954 1.9e-31 141.0 182 43.4
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 8.8e-29 132.1 132 53.8
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 2.8e-27 127.1 136 50.0
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 1.6e-25 121.3 136 52.2
SalBow1G3838 Salvia bowleyana HOM05D006674 ORTHO05D007954 2.3e-21 107.5 176 41.5
QL02p059314 Quercus lobata HOM05D006674 ORTHO05D007954 3.0e-21 107.1 177 41.8
Hma1.2p1_1214F.1_g267580 Hydrangea macrophylla HOM05D006674 ORTHO05D007954 3.7e-19 100.1 196 36.7
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 8.6e-16 89.0 168 36.9
CAN.G691.5 Capsicum annuum HOM05D006674 ORTHO05D007954 2.5e-15 87.4 142 40.1
arahy.Tifrunner.gnm1.ann1.EIPD4W Arachis hypogaea HOM05D006674 ORTHO05D007954 7.3e-15 85.9 100 47.0
Zm00001eb221070 Zea mays HOM05D006674 ORTHO05D007954 8.0e-14 82.4 169 32.0
Hund13087 Selenicereus undatus HOM05D006674 ORTHO05D007954 1.1e-10 72.0 140 33.6
CAN.G222.66 Capsicum annuum HOM05D006674 ORTHO05D007954 7.0e-10 69.3 293 25.6
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 1.2e-09 68.6 45 71.1
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 1.2e-09 68.6 45 71.1
Mapoly0177s0018 Marchantia polymorpha HOM05D006674 ORTHO05D007954 3.9e-08 63.5 197 27.4
FAN19G0964 Fragaria x ananassa HOM05D000564 ORTHO05D004145 8.6e-08 62.4 60 56.7
Glyma.08G281500 Glycine max HOM05D006674 ORTHO05D007954 7.3e-07 59.3 45 62.2
Peaxi162Scf00562g00214 Petunia axillaris HOM05D006674 ORTHO05D007954 7.3e-07 59.3 82 46.3
CSS0039398 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 9.5e-07 58.9 48 56.2
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 2.8e-06 57.4 320 24.1


User provided reference genes

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