Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G010410 Citrullus lanatus HOM05D007164 ORTHO05D008802 4.0e-251 870.9 434 100.0
Sed0021441 Sechium edule HOM05D007164 ORTHO05D008802 4.3e-168 595.1 426 71.6
CsaV3_3G018070 Cucumis sativus L. HOM05D007164 ORTHO05D008802 2.9e-164 582.4 435 71.0
MELO3C019559.2 Cucumis melo HOM05D007164 ORTHO05D008802 1.3e-111 407.5 362 63.3
MD03G1283300 Malus domestica HOM05D007164 ORTHO05D008802 7.5e-64 248.8 466 37.6
QL12p030187 Quercus lobata HOM05D007164 ORTHO05D008802 8.0e-58 228.8 480 37.3
RcHm_v2.0_Chr6g0293271 Rosa chinensis HOM05D007164 ORTHO05D008802 1.4e-54 218.0 485 34.4
FAN20G2954 Fragaria x ananassa HOM05D007164 ORTHO05D008802 4.1e-54 216.5 495 33.7
Prupe.8G256400 Prunus persica HOM05D007164 ORTHO05D008802 6.2e-50 202.6 368 37.5
TWI23G0507 Tripterygium wilfordii HOM05D007164 ORTHO05D008802 6.2e-50 202.6 385 37.7
FAN24G2541 Fragaria x ananassa HOM05D007164 ORTHO05D008802 1.4e-49 201.4 494 32.8
FAN27G1449 Fragaria x ananassa HOM05D007164 ORTHO05D008802 9.8e-48 195.3 443 34.1
CiPaw.07G104500 Carya illinoinensis HOM05D007164 ORTHO05D008802 1.3e-47 194.9 236 47.9
Manes.01G216000 Manihot esculenta HOM05D007164 ORTHO05D008802 1.3e-47 194.9 388 37.4
Sabra02G0151300 Salix brachista HOM05D007164 ORTHO05D008802 1.3e-47 194.9 445 34.4
Potri.002G208058 Populus trichocarpa HOM05D007164 ORTHO05D008802 2.9e-47 193.7 383 39.7
Atru.chr5.1222 Acer truncatum HOM05D007164 ORTHO05D008802 7.8e-45 185.7 328 41.2
Sabra02G0151900 Salix brachista HOM05D007164 ORTHO05D008802 1.3e-44 184.9 471 32.5
arahy.Tifrunner.gnm1.ann1.JK4YNR Arachis hypogaea HOM05D007164 ORTHO05D008802 3.9e-44 183.3 349 37.5
Psat5g105520 Pisum sativum HOM05D007164 ORTHO05D008802 6.6e-44 182.6 356 35.7
Lj2A1189G41 Lonicera japonica HOM05D007164 ORTHO05D008802 1.1e-43 181.8 380 34.5
HanXRQChr10g0283971 Helianthus annuus HOM05D007164 ORTHO05D008802 2.5e-43 180.6 367 34.3
Haze_04871 Corylus avellana HOM05D007164 ORTHO05D008802 5.6e-43 179.5 326 40.8
Gorai.004G088600 Gossypium raimondii HOM05D007164 ORTHO05D008802 5.6e-43 179.5 437 34.6
Duzib138G1086 Durio zibethinus HOM05D007164 ORTHO05D008802 9.5e-43 178.7 505 31.9
Eucgr.K03454 Eucalyptus grandis HOM05D007164 ORTHO05D008802 9.5e-43 178.7 341 37.5
Gohir.A08G075000 Gossypium hirsutum HOM05D007164 ORTHO05D008802 2.1e-42 177.6 388 35.1
arahy.Tifrunner.gnm1.ann1.94G738 Arachis hypogaea HOM05D007164 ORTHO05D008802 1.4e-41 174.9 270 40.7
Aqoxy2G03039 Aquilegia oxysepala HOM05D007164 ORTHO05D008802 1.8e-41 174.5 377 35.0
CANSAT25G0358 Cannabis sativa HOM05D007164 ORTHO05D008802 2.3e-41 174.1 437 33.0
Cpa.g.sc9.198 Carica papaya HOM05D007164 ORTHO05D008802 8.9e-41 172.2 433 32.1
Lj6g0003922 Lotus japonicus HOM05D007164 ORTHO05D008802 1.5e-40 171.4 292 40.1
TPR.G27420 Trifolium pratense HOM05D007164 ORTHO05D008802 1.5e-40 171.4 356 35.4
Lalb_Chr18g0047211 Lupinus albus HOM05D007164 ORTHO05D008802 4.4e-40 169.9 292 40.4
COL.COLO4_23399 Corchorus olitorius HOM05D007164 ORTHO05D008802 9.9e-40 168.7 374 35.3
Glyma.13G007800 Glycine max HOM05D007164 ORTHO05D008802 2.2e-39 167.5 368 34.8
Rhsim01G0283000 Rhododendron simsii HOM05D007164 ORTHO05D008802 9.2e-38 162.2 463 33.9
Phvul.007G122524 Phaseolus vulgaris HOM05D007164 ORTHO05D008802 1.2e-37 161.8 352 34.7
TAR636G2054 Trochodendron aralioides HOM05D007164 ORTHO05D008802 1.6e-37 161.4 393 31.6
Dinv33025 Davidia involucrata HOM05D007164 ORTHO05D008802 3.5e-37 160.2 301 35.9
Thecc.01G295000 Theobroma cacao HOM05D007164 ORTHO05D008802 7.8e-37 159.1 483 32.7
Medtr3g082270 Medicago truncatula HOM05D007164 ORTHO05D008802 3.9e-36 156.8 483 30.2
Actinidia24839 Actinidia chinensis HOM05D007164 ORTHO05D008802 8.6e-36 155.6 393 33.8
Gohir.D08G084100 Gossypium hirsutum HOM05D007164 ORTHO05D008802 1.9e-35 154.5 437 31.8
Thhalv10007546m.g Eutrema salsugineum HOM05D007164 ORTHO05D008802 2.5e-35 154.1 361 31.0
arahy.Tifrunner.gnm1.ann1.PB1NMW Arachis hypogaea HOM05D007164 ORTHO05D008802 2.8e-34 150.6 329 35.6
ECA247G0548 Erigeron canadensis HOM05D002562 ORTHO05D002808 1.4e-33 148.3 372 32.0
SGA_v2.0_scaffold2G01414 Striga asiatica HOM05D007164 ORTHO05D008802 3.1e-33 147.1 372 31.5
AUR62033184 Chenopodium quinoa HOM05D007164 ORTHO05D008802 5.2e-33 146.4 365 32.3
Carub.0001s0209 Capsella rubella HOM05D007164 ORTHO05D008802 6.8e-33 146.0 363 30.3
THA.LOC104825977 Tarenaya hassleriana HOM05D007164 ORTHO05D008802 6.8e-33 146.0 361 31.0
Ah.15g093880 Amaranthus hybridus HOM05D007164 ORTHO05D008802 1.5e-32 144.8 236 36.9
Cc11_g02370 Coffea canephora HOM05D007164 ORTHO05D008802 1.5e-32 144.8 378 32.5
C08p00350 Brassica napus HOM05D007164 ORTHO05D008802 2.6e-32 144.1 362 30.7
AL1G12400 Arabidopsis lyrata HOM05D007164 ORTHO05D008802 5.8e-32 142.9 484 28.1
BraA08t35648Z Brassica rapa HOM05D007164 ORTHO05D008802 1.7e-31 141.4 476 29.2
BcaB03g13496 Brassica carinata HOM05D007164 ORTHO05D008802 4.9e-31 139.8 362 30.7
AUR62008594 Chenopodium quinoa HOM05D007164 ORTHO05D008802 6.4e-31 139.4 348 31.6
vmacro14990 Vaccinium macrocarpon HOM05D007164 ORTHO05D008802 6.4e-31 139.4 356 34.0
Aa31LG1G9610 Aethionema arabicum HOM05D007164 ORTHO05D008802 4.2e-30 136.7 359 29.2
FvH4_2g25160 Fragaria vesca HOM05D007164 ORTHO05D008802 4.2e-30 136.7 421 31.1
BcaC07g36981 Brassica carinata HOM05D007164 ORTHO05D008802 7.1e-30 136.0 373 29.8
Sopen09g029680 Solanum pennellii HOM05D007164 ORTHO05D008802 1.6e-29 134.8 372 32.0
BolC8t46836H Brassica oleracea HOM05D007164 ORTHO05D008802 2.1e-29 134.4 368 30.2
Sp1g01950 Schrenkiella parvula HOM05D007164 ORTHO05D008802 3.5e-29 133.7 485 28.5
PGR044G2041 Punica granatum HOM05D007164 ORTHO05D008802 6.0e-29 132.9 192 43.2
GSVIVG01010946001 Vitis vinifera HOM05D007164 ORTHO05D008802 8.7e-28 129.0 303 33.3
Sc17g0003330 Simmondsia chinensis HOM05D007164 ORTHO05D008802 1.9e-27 127.9 304 32.2
A08p37510 Brassica napus HOM05D007164 ORTHO05D008802 4.3e-27 126.7 484 27.7
MSTRG.21615 Avicennia marina HOM05D007164 ORTHO05D008802 8.1e-26 122.5 380 32.1
PGR044G2559 Punica granatum HOM05D007164 ORTHO05D008802 8.1e-26 122.5 201 42.3
Oeu047459.1 Olea europaea HOM05D007164 ORTHO05D008802 4.4e-24 116.7 351 30.8
PGSC0003DMG401011367 Solanum tuberosum HOM05D007164 ORTHO05D008802 4.4e-24 116.7 352 30.4
ATR0053G018 Amborella trichopoda HOM05D007164 ORTHO05D008802 1.3e-23 115.2 340 30.6
CARHR002290 Cardamine hirsuta HOM05D007164 ORTHO05D008802 1.3e-23 115.2 219 34.2
HPP92_027362 Vanilla planifolia HOM05D007164 ORTHO05D008802 2.9e-23 114.0 168 39.3
Zm00001eb252420 Zea mays HOM05D007164 ORTHO05D008802 6.4e-23 112.8 246 32.5
Oeu047456.1 Olea europaea HOM05D007164 ORTHO05D008802 9.3e-22 109.0 328 31.4
Ciclev10017702m.g Citrus clementina HOM05D007164 ORTHO05D008802 1.2e-21 108.6 276 35.5
MBI16_g23765_MAGBIO Magnolia biondii HOM05D007164 ORTHO05D008802 2.1e-21 107.8 306 31.0
Lsat_1_v5_gn_9_3101 Lactuca sativa HOM05D007164 ORTHO05D008802 2.7e-21 107.5 159 39.6
SalBow3G2762 Salvia bowleyana HOM05D007164 ORTHO05D008802 8.7e-20 102.4 399 27.8
unitig_0.g652 Utricularia gibba HOM05D007164 ORTHO05D008802 5.6e-19 99.8 165 36.4
Migut.D00187 Erythranthe guttata HOM05D007164 ORTHO05D008802 1.3e-18 98.6 319 33.2
HanXRQChr10g0283981 Helianthus annuus HOM05D007164 ORTHO05D008802 3.6e-18 97.1 92 50.0
Hund18121 Selenicereus undatus HOM05D007164 ORTHO05D008802 4.0e-17 93.6 438 25.3
Nitab4.5_0005474g0060 Nicotiana tabacum HOM05D000498 ORTHO05D000354 4.5e-16 90.1 349 28.9
Solyc09g074840.4 Solanum lycopersicum HOM05D007164 ORTHO05D008802 2.2e-15 87.8 301 29.6
Nitab4.5_0009457g0020 Nicotiana tabacum HOM05D007164 ORTHO05D008802 1.9e-14 84.7 337 27.6
AagrBONN_evm.TU.Sc2ySwM_117.3923 Anthoceros agrestis HOM05D007164 ORTHO05D008802 4.2e-14 83.6 175 29.7
Ca_07266_v3 Cicer arietinum L. HOM05D007164 ORTHO05D008802 9.3e-14 82.4 193 30.6
Peaxi162Scf00067g02422 Petunia axillaris HOM05D007164 ORTHO05D008802 2.7e-13 80.9 330 27.6
CSS0046769 Camellia sinensis var. sinensis HOM05D007164 ORTHO05D008802 6.0e-13 79.7 282 28.7
Pp3c3_15490 Physcomitrium patens HOM05D007164 ORTHO05D008802 1.0e-12 79.0 153 31.4
ATR0691G271 Amborella trichopoda HOM05D007164 ORTHO05D008802 1.3e-12 78.6 124 37.1
AT1G02960 Arabidopsis thaliana HOM05D007164 ORTHO05D008802 2.5e-11 74.3 384 25.5
SEGI_29739 Sequoiadendron giganteum HOM05D007164 ORTHO05D008802 2.5e-11 74.3 93 38.7
VMungo0540G1256 Vigna mungo HOM05D007164 ORTHO05D008802 9.6e-11 72.4 100 42.0
Mapoly0046s0035 Marchantia polymorpha HOM05D007164 ORTHO05D008802 4.8e-10 70.1 189 29.6
DCAR_005809 Daucus carota HOM05D007164 ORTHO05D008802 5.3e-09 66.6 295 24.7
EL10Ac7g17490 Beta vulgaris HOM05D007164 ORTHO05D008802 5.5e-06 56.6 131 31.3


User provided reference genes

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