Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 7.3e-141 503.8 246 100.0
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 4.5e-130 468.0 244 92.6
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 4.5e-130 468.0 244 93.0
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 2.4e-115 419.1 244 84.4
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 1.5e-106 389.8 244 78.7
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 2.0e-106 389.4 244 77.5
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 2.0e-106 389.4 244 80.3
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.6e-106 389.0 244 77.9
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 5.9e-106 387.9 244 77.0
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 2.2e-105 386.0 246 77.6
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 2.2e-105 386.0 244 76.6
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 6.5e-105 384.4 245 78.8
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 1.4e-104 383.3 244 76.6
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 1.9e-104 382.9 245 76.7
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.9e-104 382.9 244 76.6
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.5e-104 382.5 244 76.2
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 3.2e-104 382.1 248 76.2
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 5.5e-104 381.3 248 75.4
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 1.6e-103 379.8 244 77.9
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 2.1e-103 379.4 244 76.2
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.1e-103 379.4 248 75.0
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 2.1e-103 379.4 244 76.2
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 2.7e-103 379.0 245 76.3
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.7e-103 379.0 232 77.6
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 4.6e-103 378.3 244 76.2
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 1.4e-102 376.7 232 76.3
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 3.3e-101 372.1 248 73.8
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 7.4e-101 370.9 238 74.4
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 1.3e-100 370.2 244 74.2
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 2.2e-100 369.4 238 77.7
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 3.7e-100 368.6 244 75.8
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 8.2e-100 367.5 244 73.8
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 1.1e-99 367.1 242 74.8
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 3.1e-99 365.5 245 73.1
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 5.3e-99 364.8 247 72.5
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 2.0e-98 362.8 238 76.5
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.0e-98 362.8 247 72.1
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 2.6e-98 362.5 241 74.3
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 3.4e-98 362.1 221 77.4
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 7.7e-98 360.9 244 73.4
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 1.0e-97 360.5 234 73.5
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 1.0e-97 360.5 240 73.8
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 2.9e-97 359.0 227 76.2
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 3.8e-97 358.6 237 72.6
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 3.8e-97 358.6 237 72.6
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 6.5e-97 357.8 247 73.3
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.4e-96 356.7 247 70.9
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 1.9e-96 356.3 239 72.4
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 1.9e-96 356.3 227 75.8
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 3.2e-96 355.5 237 73.0
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 9.4e-96 354.0 247 72.5
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 1.6e-95 353.2 217 77.4
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 3.6e-95 352.1 238 71.4
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 3.6e-95 352.1 234 74.8
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 4.7e-95 351.7 217 77.4
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 4.7e-95 351.7 244 70.9
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 7.9e-95 350.9 247 72.5
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 7.9e-95 350.9 237 73.8
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.8e-94 349.7 234 73.1
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 5.1e-94 348.2 238 71.4
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 5.1e-94 348.2 236 70.8
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 1.1e-93 347.1 218 74.3
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 2.6e-93 345.9 231 73.6
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 5.7e-93 344.7 221 74.2
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 9.7e-93 344.0 306 60.8
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 1.7e-92 343.2 235 71.9
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 2.8e-92 342.4 234 73.5
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 4.1e-91 338.6 235 69.8
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 5.3e-91 338.2 239 70.3
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 7.0e-91 337.8 234 71.4
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 1.6e-90 336.7 239 70.3
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 2.0e-90 336.3 235 69.4
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 4.5e-90 335.1 241 68.9
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 1.0e-89 334.0 240 67.9
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 5.0e-89 331.6 238 68.1
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.5e-88 329.3 248 69.0
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 9.4e-88 327.4 221 71.9
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 1.6e-87 326.6 194 78.9
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 2.1e-87 326.2 194 78.4
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 1.0e-86 323.9 243 66.3
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 1.4e-86 323.6 221 71.9
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 1.8e-86 323.2 229 68.1
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 1.8e-86 323.2 236 67.8
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 1.8e-86 323.2 236 67.8
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 1.8e-86 323.2 236 67.8
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 4.0e-86 322.0 219 72.6
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 5.2e-86 321.6 198 76.3
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 8.8e-86 320.9 207 75.4
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 8.8e-86 320.9 239 67.4
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 1.5e-85 320.1 210 72.4
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 2.0e-85 319.7 233 67.4
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 4.4e-85 318.5 221 70.6
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 4.4e-85 318.5 238 66.4
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 4.4e-85 318.5 238 66.4
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 1.4e-83 313.5 229 63.8
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 4.1e-83 312.0 194 76.3
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 3.5e-82 308.9 187 77.5
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 5.9e-82 308.1 230 63.9
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 1.1e-80 303.9 238 64.7
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 5.5e-80 301.6 206 72.3
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 5.7e-77 291.6 217 63.6
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 2.8e-76 289.3 198 72.2
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 5.9e-74 281.6 240 60.0
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 1.8e-70 270.0 194 65.5
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 2.3e-70 269.6 211 64.5
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 4.0e-70 268.9 260 58.1
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 4.9e-68 261.9 209 65.6
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 8.3e-68 261.2 189 66.7
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.1e-63 246.5 141 80.1
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 3.0e-62 242.7 246 52.0
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 6.8e-62 241.5 220 53.2
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 3.9e-57 225.7 223 53.4
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 3.9e-57 225.7 237 50.6
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 1.9e-56 223.4 140 77.9
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 4.7e-55 218.8 183 58.5
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 2.6e-53 213.0 193 56.5
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 9.2e-51 204.5 130 74.6
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 4.3e-32 142.5 184 43.5
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 4.0e-30 136.0 110 64.5
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 1.2e-26 124.4 208 38.0
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 2.3e-25 120.2 254 31.5
PRCOL_00006636 Prasinoderma coloniale HOM05D006286 ORTHO05D007741 9.0e-22 108.2 183 38.8
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 7.6e-21 105.1 167 38.3
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 3.3e-16 89.7 50 80.0
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 2.4e-14 83.6 49 79.6
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 2.0e-13 80.5 60 61.7
SEGI_15131 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 2.8e-07 60.1 34 73.5


User provided reference genes

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