Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G005840 Citrullus lanatus HOM05D008610 ORTHO05D010832 2.8e-93 345.5 206 100.0
CsaV3_3G014190 Cucumis sativus L. HOM05D008610 ORTHO05D010832 5.3e-76 288.1 206 78.6
MELO3C006612.2 Cucumis melo HOM05D008610 ORTHO05D010832 4.1e-68 261.9 190 80.5
Sed0011065 Sechium edule HOM05D008610 ORTHO05D010832 1.1e-62 243.8 206 68.0
Thecc.04G278400 Theobroma cacao HOM05D008610 ORTHO05D010832 2.6e-30 136.3 205 43.9
QL06p007560 Quercus lobata HOM05D008610 ORTHO05D010832 1.9e-25 120.2 205 41.0
Duzib151G0343 Durio zibethinus HOM05D008610 ORTHO05D010832 1.8e-23 113.6 208 41.3
TWI09G0412 Tripterygium wilfordii HOM05D008610 ORTHO05D010832 6.8e-23 111.7 210 41.0
TAR362G0442 Trochodendron aralioides HOM05D008610 ORTHO05D010832 2.0e-22 110.2 209 40.7
COL.COLO4_13922 Corchorus olitorius HOM05D008610 ORTHO05D010832 1.3e-21 107.5 160 44.4
CANSAT78G1094 Cannabis sativa HOM05D008610 ORTHO05D010832 8.3e-21 104.8 212 35.8
CSS0018848 Camellia sinensis var. sinensis HOM05D008610 ORTHO05D010832 5.4e-20 102.1 208 38.9
Rhsim02G0012900 Rhododendron simsii HOM05D008610 ORTHO05D010832 1.6e-19 100.5 189 43.4
VMungo1215G1271 Vigna mungo HOM05D008610 ORTHO05D010832 1.7e-18 97.1 185 38.9
Actinidia23424 Actinidia chinensis HOM05D008610 ORTHO05D010832 3.0e-18 96.3 208 36.5
Ca_21546_v3 Cicer arietinum L. HOM05D008610 ORTHO05D010832 3.0e-18 96.3 175 41.7
Phvul.003G101300 Phaseolus vulgaris HOM05D008610 ORTHO05D010832 1.1e-17 94.4 203 36.9
Hma1.2p1_0823F.1_g224690 Hydrangea macrophylla HOM05D008610 ORTHO05D010832 4.3e-17 92.4 179 39.7
Glyma.07G251100 Glycine max HOM05D008610 ORTHO05D010832 1.2e-16 90.9 185 36.8
Glyma.17G023200 Glycine max HOM05D008610 ORTHO05D010832 1.6e-16 90.5 174 38.5
Lj4g0020809 Lotus japonicus HOM05D008610 ORTHO05D010832 3.6e-16 89.4 169 38.5
Dinv44421 Davidia involucrata HOM05D008610 ORTHO05D010832 6.2e-16 88.6 149 43.0
Psat4g226320 Pisum sativum HOM05D008610 ORTHO05D010832 1.4e-15 87.4 172 41.9
Peaxi162Scf00386g00922 Petunia axillaris HOM05D008610 ORTHO05D010832 1.8e-15 87.0 166 39.8
TPR.G28783 Trifolium pratense HOM05D008610 ORTHO05D010832 6.8e-15 85.1 172 37.2
arahy.Tifrunner.gnm1.ann1.L0EE17 Arachis hypogaea HOM05D008610 ORTHO05D010832 3.4e-14 82.8 169 34.9
Nn4g26013 Nelumbo nucifera HOM05D008610 ORTHO05D010832 9.8e-14 81.3 176 37.5
Solyc01g067340.3 Solanum lycopersicum HOM05D008610 ORTHO05D010832 2.9e-13 79.7 171 36.8
DCAR_027105 Daucus carota HOM05D008610 ORTHO05D010832 3.7e-13 79.3 167 39.5
Nitab4.5_0000829g0060 Nicotiana tabacum HOM05D008610 ORTHO05D010832 3.7e-13 79.3 157 38.2
Medtr4g118830 Medicago truncatula HOM05D008610 ORTHO05D010832 4.9e-13 79.0 173 36.4
arahy.Tifrunner.gnm1.ann1.2NND9M Arachis hypogaea HOM05D008610 ORTHO05D010832 8.3e-13 78.2 171 32.7
CAN.G556.6 Capsicum annuum HOM05D008610 ORTHO05D010832 8.3e-13 78.2 166 36.7
Aqoxy2G03100 Aquilegia oxysepala HOM05D008610 ORTHO05D010832 2.4e-12 76.6 190 33.7
Nitab4.5_0002986g0040 Nicotiana tabacum HOM05D008610 ORTHO05D010832 3.2e-12 76.3 156 36.5
unitig_748.g8579 Utricularia gibba HOM05D008610 ORTHO05D010832 5.0e-10 68.9 161 33.5
Lalb_Chr12g0196451 Lupinus albus HOM05D008610 ORTHO05D010832 1.2e-08 64.3 147 33.3
Sopen01g029220 Solanum pennellii HOM05D008610 ORTHO05D010832 2.0e-06 57.0 140 35.0
Atru.chr4.2765 Acer truncatum HOM05D008610 ORTHO05D010832 2.6e-06 56.6 101 38.6


User provided reference genes

Program Settings