Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G005370 Citrullus lanatus HOM05D008368 ORTHO05D010489 2.7e-49 198.4 101 100.0
CsaV3_3G013620 Cucumis sativus L. HOM05D008368 ORTHO05D010489 2.2e-22 109.0 61 91.8
MELO3C006556.2 Cucumis melo HOM05D008368 ORTHO05D010489 6.5e-19 97.4 61 82.0
Sed0011273 Sechium edule HOM05D008368 ORTHO05D010489 2.6e-15 85.5 63 71.4
CiPaw.01G161200 Carya illinoinensis HOM05D008368 ORTHO05D010489 4.2e-10 68.2 52 67.3
arahy.Tifrunner.gnm1.ann1.IPV0IY Arachis hypogaea HOM05D008368 ORTHO05D010489 6.1e-09 64.3 56 60.7
AUR62038186 Chenopodium quinoa HOM05D008368 ORTHO05D010489 8.0e-09 63.9 77 51.9
arahy.Tifrunner.gnm1.ann1.121ATL Arachis hypogaea HOM05D008368 ORTHO05D010489 2.3e-08 62.4 50 66.0
CSS0036726 Camellia sinensis var. sinensis HOM05D008368 ORTHO05D010489 5.2e-08 61.2 44 63.6
AUR62038060 Chenopodium quinoa HOM05D008368 ORTHO05D010489 6.7e-08 60.8 43 67.4
Glyma.13G207400 Glycine max HOM05D008368 ORTHO05D010489 6.7e-08 60.8 46 65.2
Medtr2g022540 Medicago truncatula HOM05D008368 ORTHO05D010489 6.7e-08 60.8 67 52.2
Thecc.04G224200 Theobroma cacao HOM05D008368 ORTHO05D010489 6.7e-08 60.8 56 57.1
Cc03_g03240 Coffea canephora HOM05D008368 ORTHO05D010489 8.8e-08 60.5 39 74.4
Actinidia08510 Actinidia chinensis HOM05D008368 ORTHO05D010489 1.5e-07 59.7 53 64.2
Ca_00655_v3 Cicer arietinum L. HOM05D008368 ORTHO05D010489 1.5e-07 59.7 43 65.1
Lsat_1_v5_gn_7_68141 Lactuca sativa HOM05D008368 ORTHO05D010489 3.3e-07 58.5 48 66.7
Phvul.006G152200 Phaseolus vulgaris HOM05D008368 ORTHO05D010489 5.7e-07 57.8 45 64.4
Prupe.1G152900 Prunus persica HOM05D008368 ORTHO05D010489 5.7e-07 57.8 49 59.2
SalBow2G2001 Salvia bowleyana HOM05D008368 ORTHO05D010489 5.7e-07 57.8 47 63.8
Ca_00633_v3 Cicer arietinum L. HOM05D008368 ORTHO05D010489 1.3e-06 56.6 42 64.3
TPR.G30686 Trifolium pratense HOM05D008368 ORTHO05D010489 1.3e-06 56.6 39 66.7
TPR.G40572 Trifolium pratense HOM05D008368 ORTHO05D010489 1.3e-06 56.6 39 66.7
THA.LOC104818801 Tarenaya hassleriana HOM05D008368 ORTHO05D010489 1.7e-06 56.2 51 58.8
EL10Ac3g06405 Beta vulgaris HOM05D008368 ORTHO05D010489 2.2e-06 55.8 43 60.5
EL10Ac3g06406 Beta vulgaris HOM05D008368 ORTHO05D010489 2.2e-06 55.8 43 60.5
Nn4g26217 Nelumbo nucifera HOM05D007833 ORTHO05D009855 2.2e-06 55.8 55 49.1
Sopen01g031610 Solanum pennellii HOM05D008368 ORTHO05D010489 2.2e-06 55.8 40 62.5
DCAR_002404 Daucus carota HOM05D008368 ORTHO05D010489 2.8e-06 55.5 60 55.0
Potri.008G203800 Populus trichocarpa HOM05D008368 ORTHO05D010489 2.8e-06 55.5 39 71.8
Aa31LG11G10480 Aethionema arabicum HOM05D008368 ORTHO05D010489 3.7e-06 55.1 50 56.0
FvH4_4g14770 Fragaria vesca HOM05D008368 ORTHO05D010489 4.8e-06 54.7 39 66.7
FAN07G1534 Fragaria x ananassa HOM05D008368 ORTHO05D010489 4.8e-06 54.7 39 66.7
FAN17G1872 Fragaria x ananassa HOM05D008368 ORTHO05D010489 4.8e-06 54.7 39 66.7


User provided reference genes

Program Settings