Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G004780 Citrullus lanatus HOM05D025894 ORTHO05D010081 0.0e+00 1396.7 854 100.0
CsaV3_3G012810 Cucumis sativus L. HOM05D025894 ORTHO05D010081 4.3e-257 891.7 837 69.7
MELO3C006492.2 Cucumis melo HOM05D025894 ORTHO05D010081 3.3e-249 865.5 843 70.1
Sed0006870 Sechium edule HOM05D025894 ORTHO05D010081 1.3e-160 571.2 996 51.3
Potri.008G159200 Populus trichocarpa HOM05D008144 ORTHO05D010081 1.7e-27 129.0 509 28.7
Potri.010G081000 Populus trichocarpa HOM05D008144 ORTHO05D010081 5.5e-26 124.0 520 28.7
Atru.chr4.2325 Acer truncatum HOM05D008144 ORTHO05D010081 6.7e-24 117.1 345 32.2
Sabra08G0121300 Salix brachista HOM05D008144 ORTHO05D010081 1.3e-22 112.8 487 27.7
Prupe.1G023500 Prunus persica HOM05D008144 ORTHO05D010081 4.1e-21 107.8 589 26.8
Duzib212G0503 Durio zibethinus HOM05D008144 ORTHO05D010081 2.2e-19 102.1 466 27.5
Dinv14059 Davidia involucrata HOM05D008144 ORTHO05D010081 2.9e-19 101.7 464 28.0
Manes.03G171900 Manihot esculenta HOM05D008144 ORTHO05D010081 1.1e-18 99.8 360 29.7
QL06p000574 Quercus lobata HOM05D008144 ORTHO05D010081 1.1e-18 99.8 949 23.6
Thecc.04G241000 Theobroma cacao HOM05D008144 ORTHO05D010081 1.9e-18 99.0 504 28.4
Ciclev10004664m.g Citrus clementina HOM05D008144 ORTHO05D010081 2.5e-18 98.6 471 27.8
COL.COLO4_13184 Corchorus olitorius HOM05D008144 ORTHO05D010081 4.2e-18 97.8 292 33.2
Haze_11249 Corylus avellana HOM05D008144 ORTHO05D010081 9.4e-18 96.7 601 25.0
FAN12G1940 Fragaria x ananassa HOM05D008144 ORTHO05D010081 2.3e-16 92.0 528 27.5
FAN17G0986 Fragaria x ananassa HOM05D008144 ORTHO05D010081 8.8e-16 90.1 541 26.8
FAN17G1249 Fragaria x ananassa HOM05D008144 ORTHO05D010081 8.8e-16 90.1 541 26.8
Cpa.g.sc44.134 Carica papaya HOM05D008144 ORTHO05D010081 4.4e-15 87.8 161 40.4
FvH4_4g01740 Fragaria vesca HOM05D008144 ORTHO05D010081 4.4e-15 87.8 532 27.1
FAN22G0807 Fragaria x ananassa HOM05D008144 ORTHO05D010081 4.4e-15 87.8 531 26.9
RcHm_v2.0_Chr4g0388601 Rosa chinensis HOM05D008144 ORTHO05D010081 7.4e-15 87.0 449 26.9
CANSAT78G0891 Cannabis sativa HOM05D008144 ORTHO05D010081 2.2e-14 85.5 486 28.6
MD13G1201700 Malus domestica HOM05D008144 ORTHO05D010081 3.7e-14 84.7 465 26.0
Gorai.005G045900 Gossypium raimondii HOM05D008144 ORTHO05D010081 6.3e-14 84.0 169 37.3
Glyma.02G002200 Glycine max HOM05D008144 ORTHO05D010081 8.2e-14 83.6 196 35.2
VMungo0720G0769 Vigna mungo HOM05D008144 ORTHO05D010081 3.1e-13 81.6 247 30.4
TPR.G32783 Trifolium pratense HOM05D008144 ORTHO05D010081 5.3e-13 80.9 268 28.7
Duzib151G0265 Durio zibethinus HOM05D008144 ORTHO05D010081 7.0e-13 80.5 539 25.6
MD16G1202000 Malus domestica HOM05D008144 ORTHO05D010081 1.2e-12 79.7 225 30.7
CSS0041819 Camellia sinensis var. sinensis HOM05D008144 ORTHO05D010081 2.0e-12 79.0 504 27.0
Psat6g103240 Pisum sativum HOM05D008144 ORTHO05D010081 2.0e-12 79.0 171 32.7
GSVIVG01018069001 Vitis vinifera HOM05D008144 ORTHO05D010081 1.3e-11 76.3 476 26.1
CiPaw.01G194000 Carya illinoinensis HOM05D008144 ORTHO05D010081 2.2e-11 75.5 547 25.6
Phvul.007G278800 Phaseolus vulgaris HOM05D008144 ORTHO05D010081 5.0e-11 74.3 279 28.0
Medtr1g041300 Medicago truncatula HOM05D008144 ORTHO05D010081 1.4e-10 72.8 546 23.1
Dinv44593 Davidia involucrata HOM05D008144 ORTHO05D010081 3.2e-10 71.6 508 25.0
TWI73G1171 Tripterygium wilfordii HOM05D008144 ORTHO05D010081 4.7e-09 67.8 196 30.6
Gohir.D02G041500 Gossypium hirsutum HOM05D008144 ORTHO05D010081 6.7e-08 63.9 422 24.9
AL7G41440 Arabidopsis lyrata HOM05D011210 ORTHO05D013204 1.1e-07 63.2 146 39.0
Gohir.A02G034700 Gossypium hirsutum HOM05D008144 ORTHO05D010081 1.1e-07 63.2 426 25.6
Lalb_Chr03g0037551 Lupinus albus HOM05D008144 ORTHO05D010081 1.1e-07 63.2 430 24.7
Peaxi162Scf00758g00019 Petunia axillaris HOM05D014400 ORTHO05D010081 4.4e-07 61.2 163 29.4
THA.LOC104809081 Tarenaya hassleriana HOM05D011210 ORTHO05D013204 5.7e-07 60.8 166 29.5
Actinidia04502 Actinidia chinensis HOM05D008144 ORTHO05D010081 6.3e-06 57.4 203 30.0


User provided reference genes

Program Settings