Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 0.0e+00 1353.6 650 100.0
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 0.0e+00 1234.9 647 91.2
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 0.0e+00 1209.5 650 88.8
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 0.0e+00 1147.9 651 85.1
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 1.1e-281 973.0 580 77.2
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 4.3e-281 971.1 602 76.2
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 5.2e-279 964.1 580 76.4
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 2.6e-278 961.8 583 77.4
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 2.6e-278 961.8 637 73.2
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 4.4e-278 961.1 642 71.7
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 4.9e-277 957.6 580 77.4
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 8.4e-277 956.8 652 71.3
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 3.2e-276 954.9 632 73.1
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 5.4e-276 954.1 659 70.6
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 1.3e-274 949.5 595 74.6
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 5.1e-274 947.6 576 76.4
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 1.5e-273 946.0 666 70.7
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 3.3e-273 944.9 626 70.9
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 4.3e-273 944.5 630 72.2
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 7.3e-273 943.7 630 72.1
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 1.6e-272 942.6 579 76.3
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 4.7e-272 941.0 582 76.5
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 1.1e-271 939.9 579 76.5
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 1.4e-271 939.5 584 76.2
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 4.0e-271 937.9 666 69.1
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 6.9e-271 937.2 579 75.6
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 9.0e-271 936.8 584 75.0
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 9.0e-271 936.8 631 71.3
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 2.6e-270 935.3 579 75.3
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 2.6e-270 935.3 658 69.1
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 3.4e-270 934.9 580 75.9
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 5.8e-270 934.1 641 71.5
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 9.9e-270 933.3 592 75.0
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 1.3e-269 932.9 608 72.9
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 1.3e-269 932.9 579 75.5
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 1.7e-269 932.6 584 74.5
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 1.7e-269 932.6 625 70.2
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 1.7e-269 932.6 638 70.1
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 2.2e-269 932.2 589 73.9
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 2.2e-269 932.2 579 76.0
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 2.9e-269 931.8 636 70.8
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 6.4e-269 930.6 601 73.5
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 8.4e-269 930.2 577 75.7
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 1.1e-268 929.9 588 75.0
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 4.2e-268 927.9 658 69.5
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 2.1e-267 925.6 586 73.2
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 2.7e-267 925.2 645 69.6
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 1.7e-266 922.5 593 74.0
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 5.1e-266 921.0 627 71.5
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 3.3e-265 918.3 596 73.3
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 6.9e-263 910.6 712 63.8
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 9.0e-263 910.2 576 74.3
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 4.5e-262 907.9 582 73.5
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 2.2e-261 905.6 579 73.1
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 6.4e-261 904.0 596 71.1
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 3.2e-260 901.7 630 68.6
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 7.1e-260 900.6 582 72.9
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 3.9e-258 894.8 596 70.0
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 2.1e-256 889.0 558 74.2
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 8.1e-256 887.1 602 70.3
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 1.4e-255 886.3 595 70.1
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.8e-255 885.9 639 68.2
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 2.4e-255 885.6 639 68.2
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 3.1e-255 885.2 639 68.1
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.2e-254 883.2 639 68.1
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 1.2e-254 883.2 594 70.0
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 1.5e-254 882.9 579 73.1
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 2.0e-254 882.5 585 71.1
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 2.9e-253 878.6 547 76.2
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 9.3e-252 873.6 634 67.2
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 9.6e-249 863.6 587 70.2
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 3.1e-247 858.6 627 67.5
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 2.2e-245 852.4 634 67.2
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 4.2e-244 848.2 583 69.5
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 1.2e-243 846.7 582 69.8
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 6.3e-240 834.3 602 67.3
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 6.9e-239 830.9 595 68.1
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 7.2e-236 820.8 629 65.5
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 7.9e-235 817.4 634 65.1
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 1.4e-234 816.6 617 63.4
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 3.3e-233 812.0 635 65.0
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 3.3e-233 812.0 635 65.0
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 3.7e-232 808.5 608 65.8
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 4.5e-230 801.6 557 68.2
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 5.9e-230 801.2 635 64.3
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 2.5e-228 795.8 571 67.1
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 5.5e-228 794.7 633 64.0
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 2.8e-224 782.3 628 63.9
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 1.2e-222 776.9 638 61.1
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 5.5e-220 768.1 576 64.8
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 3.0e-218 762.3 628 61.8
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 5.3e-207 724.9 577 61.0
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 7.5e-193 677.9 568 58.5
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 2.8e-187 659.4 613 56.3
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 8.0e-187 657.9 521 63.3
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 4.9e-184 648.7 584 56.0
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 1.1e-183 647.5 581 56.6
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 1.5e-172 610.5 631 51.2
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 2.5e-172 609.8 621 52.2
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 6.2e-171 605.1 589 51.8
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 1.2e-166 590.9 373 71.8
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 1.5e-140 504.2 516 53.5
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 9.7e-124 448.4 256 81.2
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 4.8e-99 366.3 210 80.5
Oeu037929.1 Olea europaea HOM05D006696 ORTHO05D008683 3.6e-78 297.0 212 68.9
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 4.9e-67 260.0 194 61.3
Sopen01g036900 Solanum pennellii HOM05D006696 ORTHO05D008683 1.4e-61 241.9 220 57.3
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 1.7e-48 198.4 107 83.2
Atru.chr4.660 Acer truncatum HOM05D006696 ORTHO05D030753 1.3e-40 172.2 132 59.1
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 1.4e-26 125.6 80 75.0
Zm00001eb027220 Zea mays HOM05D006696 ORTHO05D008683 2.7e-25 121.3 101 54.5
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 1.3e-24 119.0 65 81.5
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 2.1e-22 111.7 65 78.5
Phvul.010G066778 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 1.2e-17 95.9 110 50.0
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 1.1e-13 82.8 43 86.0
Lsat_1_v5_gn_8_142581 Lactuca sativa HOM05D006696 ORTHO05D030753 2.4e-13 81.6 133 39.1
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 9.0e-13 79.7 37 94.6
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 2.2e-11 75.1 39 84.6


User provided reference genes

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