Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G000570 Citrullus lanatus HOM05D005886 ORTHO05D007512 1.2e-55 219.5 105 100.0
Sed0002183 Sechium edule HOM05D005886 ORTHO05D007512 2.4e-16 89.0 109 54.1
ClCG08G008440 Citrullus lanatus HOM05D005886 ORTHO05D007512 2.9e-14 82.0 106 50.0
TAR623G1656 Trochodendron aralioides HOM05D005886 ORTHO05D007512 5.5e-13 77.8 109 42.2
MELO3C019914.2 Cucumis melo HOM05D005886 ORTHO05D007512 5.2e-11 71.2 102 45.1
Manes.10G059400 Manihot esculenta HOM05D005886 ORTHO05D007512 8.8e-11 70.5 106 40.6
CsaV3_6G004430 Cucumis sativus L. HOM05D005886 ORTHO05D007512 3.4e-10 68.6 99 44.4
Nitab4.5_0011494g0010 Nicotiana tabacum HOM05D005886 ORTHO05D007512 3.4e-10 68.6 112 40.2
CiPaw.13G045200 Carya illinoinensis HOM05D005886 ORTHO05D007512 5.7e-10 67.8 92 44.6
EL10Ac4g08740 Beta vulgaris HOM05D005886 ORTHO05D007512 1.7e-09 66.2 107 41.1
CSS0026439 Camellia sinensis var. sinensis HOM05D005886 ORTHO05D007512 1.7e-09 66.2 91 41.8
CAN.G143.55 Capsicum annuum HOM05D005886 ORTHO05D007512 4.9e-09 64.7 113 38.1
Prupe.2G074600 Prunus persica HOM05D005886 ORTHO05D007512 6.3e-09 64.3 112 41.1
TWI63G1702 Tripterygium wilfordii HOM05D005886 ORTHO05D007512 6.3e-09 64.3 106 41.5
Cfa004262 Carpinus fangiana HOM05D005886 ORTHO05D007512 8.3e-09 63.9 97 42.3
CSS0019543 Camellia sinensis var. sinensis HOM05D005886 ORTHO05D007512 1.1e-08 63.5 91 40.7
CANSAT56G3685 Cannabis sativa HOM05D005886 ORTHO05D007512 1.1e-08 63.5 105 40.0
Hma1.2p1_0098F.1_g048230 Hydrangea macrophylla HOM05D005886 ORTHO05D007512 1.8e-08 62.8 91 42.9
Rhsim03G0094200 Rhododendron simsii HOM05D005886 ORTHO05D007512 3.1e-08 62.0 112 38.4
Sc09g0004780 Simmondsia chinensis HOM05D005886 ORTHO05D007512 3.1e-08 62.0 104 38.5
PGSC0003DMG400000991 Solanum tuberosum HOM05D005886 ORTHO05D007512 5.4e-08 61.2 113 38.1
Nn6g34619 Nelumbo nucifera HOM05D005886 ORTHO05D007512 7.0e-08 60.8 109 37.6
Actinidia06678 Actinidia chinensis HOM05D005886 ORTHO05D007512 9.2e-08 60.5 93 44.1
CSS0035441 Camellia sinensis var. sinensis HOM05D005886 ORTHO05D007512 9.2e-08 60.5 108 37.0
Dinv03810 Davidia involucrata HOM05D005886 ORTHO05D007512 1.2e-07 60.1 102 40.2
Solyc11g006400.2 Solanum lycopersicum HOM05D005886 ORTHO05D007512 1.2e-07 60.1 113 38.1
Sopen11g002300 Solanum pennellii HOM05D005886 ORTHO05D007512 1.2e-07 60.1 113 38.1
FvH4_7g05470 Fragaria vesca HOM05D005886 ORTHO05D007512 1.6e-07 59.7 87 41.4
FAN10G0591 Fragaria x ananassa HOM05D005886 ORTHO05D007512 1.6e-07 59.7 87 41.4
Lj3A922T58 Lonicera japonica HOM05D005886 ORTHO05D007512 1.6e-07 59.7 94 40.4
MSTRG.9023 Avicennia marina HOM05D005886 ORTHO05D007512 2.0e-07 59.3 92 37.0
FAN01G1003 Fragaria x ananassa HOM05D005886 ORTHO05D007512 2.7e-07 58.9 86 41.9
MBI11_g01323_MAGBIO Magnolia biondii HOM05D005886 ORTHO05D007512 3.5e-07 58.5 98 42.9
MBI11_g46414_MAGBIO Magnolia biondii HOM05D005886 ORTHO05D007512 3.5e-07 58.5 98 42.9
Lj3A921T39 Lonicera japonica HOM05D005886 ORTHO05D007512 4.5e-07 58.2 94 39.4
Ah.04g162600 Amaranthus hybridus HOM05D003771 ORTHO05D004396 1.0e-06 57.0 108 34.3
FAN03G3046 Fragaria x ananassa HOM05D005886 ORTHO05D007512 2.9e-06 55.5 75 41.3
SGA_v2.0_scaffold13G06426 Striga asiatica HOM05D005886 ORTHO05D007512 2.9e-06 55.5 103 34.0
Hund07230 Selenicereus undatus HOM05D005886 ORTHO05D007512 5.0e-06 54.7 109 34.9


User provided reference genes

Program Settings