Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 0.0e+00 1174.1 591 100.0
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 6.4e-300 1033.5 579 91.2
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 6.8e-294 1013.4 575 89.0
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 2.7e-213 745.7 573 66.3
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 2.5e-211 739.2 581 65.9
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 1.2e-210 736.9 573 65.1
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 8.9e-209 730.7 576 63.9
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 2.0e-208 729.6 585 66.2
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 2.2e-207 726.1 564 67.4
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 1.8e-206 723.0 583 65.2
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 2.4e-206 722.6 564 67.7
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 4.1e-206 721.8 581 64.2
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 1.9e-203 713.0 581 64.4
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 3.6e-202 708.8 582 62.5
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 8.0e-202 707.6 524 65.6
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 8.0e-202 707.6 563 65.0
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 1.8e-201 706.4 578 62.8
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 1.5e-200 703.4 575 63.3
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 1.7e-199 699.9 531 65.2
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 1.1e-198 697.2 577 62.6
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 4.1e-198 695.3 553 63.3
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 4.6e-197 691.8 553 63.1
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 3.0e-196 689.1 578 62.3
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 5.0e-196 688.3 520 65.2
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 4.3e-195 685.3 354 95.2
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 4.3e-195 685.3 578 62.1
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 5.6e-195 684.9 532 63.7
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 6.8e-193 677.9 568 61.1
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 1.5e-192 676.8 518 64.3
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 2.6e-192 676.0 521 65.3
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 2.2e-191 672.9 515 64.7
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 4.9e-191 671.8 522 63.8
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 1.1e-190 670.6 550 61.6
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 2.4e-190 669.5 520 64.8
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 4.1e-190 668.7 590 60.5
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 9.2e-190 667.5 550 61.5
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 4.6e-189 665.2 530 63.4
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 1.0e-188 664.1 521 63.1
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 1.0e-188 664.1 534 62.9
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 2.3e-188 662.9 530 60.9
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 3.9e-188 662.1 553 63.5
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 4.3e-187 658.7 469 66.5
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 9.5e-187 657.5 513 61.4
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 1.2e-186 657.1 469 65.9
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 2.0e-184 649.8 469 66.1
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 3.4e-184 649.0 521 62.0
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 4.4e-184 648.7 525 60.4
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 5.8e-184 648.3 566 58.1
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 9.9e-184 647.5 495 62.4
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 4.9e-183 645.2 483 64.4
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 8.4e-183 644.4 581 58.2
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 3.2e-182 642.5 486 62.8
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.2e-182 642.5 486 62.6
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.2e-182 642.5 486 62.8
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 5.4e-182 641.7 519 61.7
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 5.4e-182 641.7 519 61.7
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.1e-181 639.8 486 62.3
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.7e-181 639.4 486 62.8
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.7e-181 639.4 486 62.8
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 4.6e-181 638.6 525 60.4
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 6.0e-181 638.3 527 60.3
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 1.7e-180 636.7 489 62.6
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 3.9e-180 635.6 565 60.5
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 1.9e-179 633.3 486 63.0
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 3.3e-179 632.5 580 57.2
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 7.3e-179 631.3 482 63.7
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 9.6e-179 630.9 486 63.0
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 9.6e-179 630.9 509 61.1
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 1.2e-178 630.6 493 63.3
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 3.6e-178 629.0 582 59.6
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 1.1e-177 627.5 532 58.3
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.4e-177 627.1 486 61.5
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 3.1e-177 625.9 505 62.0
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 3.4e-176 622.5 530 57.0
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 1.4e-174 617.1 519 58.6
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 9.3e-174 614.4 580 54.8
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 1.3e-172 610.5 419 69.2
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 3.0e-172 609.4 507 59.4
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 3.0e-172 609.4 521 58.0
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 6.6e-172 608.2 498 60.4
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 1.6e-170 603.6 518 56.6
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 4.8e-170 602.1 524 57.1
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 1.1e-169 600.9 524 56.5
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 9.0e-169 597.8 511 56.6
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 4.4e-168 595.5 516 56.2
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 6.4e-167 591.7 530 58.1
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 1.9e-166 590.1 509 56.8
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 2.4e-166 589.7 506 58.3
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.2e-166 589.3 458 61.1
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 2.1e-165 586.6 516 56.8
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 1.4e-161 573.9 523 53.7
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 4.5e-160 568.9 492 58.9
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 6.4e-159 565.1 513 54.2
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 1.4e-158 563.9 467 57.4
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 3.2e-158 562.8 472 57.0
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 1.2e-157 560.8 580 51.0
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 1.6e-157 560.5 586 51.0
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 8.1e-154 548.1 511 56.2
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 2.1e-149 533.5 401 63.8
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 4.6e-141 505.8 354 68.6
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 6.1e-133 478.8 511 48.5
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 3.9e-124 449.5 486 49.2
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 1.7e-114 417.5 482 44.0
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 1.6e-112 411.0 459 46.4
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 1.3e-111 407.9 420 48.6
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 4.8e-106 389.4 494 42.5
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 5.2e-100 369.4 492 40.9
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 1.4e-84 318.2 527 35.9
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 1.6e-77 294.7 666 29.4
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 7.3e-62 242.7 502 31.7
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 2.2e-50 204.5 486 28.8
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 1.5e-43 181.8 418 30.9
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 1.4e-28 132.1 99 60.6
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 1.4e-28 132.1 99 60.6
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 1.7e-26 125.2 98 59.2
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 5.0e-18 97.1 419 22.4


User provided reference genes

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