Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 1.1e-130 469.9 230 100.0
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 1.6e-84 316.6 165 93.9
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 1.7e-83 313.2 165 92.7
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 8.8e-80 300.8 165 90.3
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 1.2e-60 237.3 166 68.1
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 2.7e-60 236.1 165 67.3
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 7.3e-58 228.0 165 66.1
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 9.5e-58 227.6 165 66.7
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 3.6e-57 225.7 167 65.3
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 4.7e-57 225.3 162 67.3
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 1.0e-56 224.2 162 67.3
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 1.8e-56 223.4 165 66.1
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 6.8e-56 221.5 162 66.7
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 3.4e-55 219.2 167 65.3
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 4.4e-55 218.8 162 65.4
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 5.8e-55 218.4 165 65.5
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 7.5e-55 218.0 162 65.4
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 2.9e-54 216.1 165 64.8
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 1.1e-53 214.2 161 64.6
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 5.4e-53 211.8 165 61.2
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 7.0e-53 211.5 166 60.8
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 1.2e-52 210.7 162 62.3
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 2.0e-52 209.9 162 63.0
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 3.5e-52 209.1 162 63.0
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 4.6e-52 208.8 163 62.0
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 6.0e-52 208.4 166 61.4
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 6.0e-52 208.4 166 61.4
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 1.3e-51 207.2 165 62.4
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 1.9e-50 203.4 168 59.5
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 1.9e-50 203.4 163 62.6
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 7.3e-50 201.4 167 58.1
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 1.2e-49 200.7 153 63.4
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 1.6e-49 200.3 166 61.4
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 2.8e-49 199.5 148 64.2
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 2.3e-48 196.4 162 61.1
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 4.4e-47 192.2 170 57.1
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 7.5e-47 191.4 167 56.9
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 2.2e-46 189.9 144 63.9
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 2.9e-46 189.5 169 57.4
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 6.4e-46 188.3 154 59.7
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 8.3e-46 188.0 165 57.0
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 2.4e-45 186.4 170 55.3
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 2.4e-45 186.4 155 56.8
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 5.4e-45 185.3 165 56.4
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 5.4e-45 185.3 167 55.7
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 9.2e-45 184.5 171 57.3
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 1.2e-44 184.1 136 64.0
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 1.2e-44 184.1 167 55.7
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 1.2e-44 184.1 166 56.6
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 1.2e-44 184.1 167 55.1
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 2.1e-44 183.3 166 55.4
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 3.5e-44 182.6 165 55.2
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 3.5e-44 182.6 168 57.7
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 4.6e-44 182.2 168 56.0
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 4.6e-44 182.2 165 54.5
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 4.6e-44 182.2 176 58.0
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 1.0e-43 181.0 170 52.9
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 1.3e-43 180.6 163 55.2
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 1.3e-43 180.6 163 55.2
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 1.3e-43 180.6 154 59.1
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 1.7e-43 180.3 163 55.2
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 1.7e-43 180.3 133 63.9
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 2.3e-43 179.9 158 58.9
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 2.3e-43 179.9 163 55.2
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 8.6e-43 177.9 107 72.0
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 8.6e-43 177.9 160 53.8
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 1.1e-42 177.6 165 53.3
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 1.9e-42 176.8 151 57.0
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 2.5e-42 176.4 171 56.1
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 1.6e-41 173.7 170 54.1
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 6.2e-41 171.8 150 58.0
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 8.1e-41 171.4 106 73.6
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 1.4e-40 170.6 165 53.9
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.3e-40 169.9 106 73.6
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 2.3e-40 169.9 142 57.7
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 2.3e-40 169.9 155 55.5
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 5.2e-40 168.7 106 72.6
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 3.4e-39 166.0 172 52.9
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 7.5e-39 164.9 104 70.2
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 9.9e-39 164.5 161 52.8
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 6.4e-38 161.8 141 55.3
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 5.4e-37 158.7 120 58.3
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 6.0e-36 155.2 138 54.3
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 1.0e-35 154.5 130 56.2
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 1.3e-35 154.1 149 54.4
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 1.3e-35 154.1 187 44.4
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 3.0e-35 152.9 109 58.7
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 8.6e-35 151.4 167 47.9
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 4.3e-34 149.1 170 48.2
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.6e-33 147.1 114 58.8
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 6.8e-32 141.7 131 54.2
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 8.9e-32 141.4 171 45.6
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 4.4e-31 139.0 134 54.5
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 2.7e-28 129.8 78 71.8
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 1.0e-27 127.9 87 65.5
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.3e-27 126.7 73 78.1
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 3.0e-27 126.3 73 76.7
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 5.6e-26 122.1 75 72.0
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 9.6e-26 121.3 109 47.7
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 9.0e-24 114.8 78 67.9
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 1.7e-22 110.5 113 46.9
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 4.9e-22 109.0 117 44.4
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 7.1e-21 105.1 117 43.6
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 7.1e-21 105.1 117 43.6
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 5.1e-19 99.0 73 57.5
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 9.6e-18 94.7 69 56.5


User provided reference genes

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