Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG04G012080 Citrullus lanatus HOM05D008369 ORTHO05D005932 5.6e-116 421.0 221 100.0
Sed0006867 Sechium edule HOM05D008369 ORTHO05D005932 2.4e-58 229.6 208 64.4
MELO3C002000.2 Cucumis melo HOM05D008369 ORTHO05D005932 7.2e-47 191.4 185 64.9
CsaV3_1G005690 Cucumis sativus L. HOM05D008369 ORTHO05D005932 1.2e-46 190.7 193 62.7
MD06G1197700 Malus domestica HOM05D008369 ORTHO05D005932 4.3e-15 85.9 179 43.0
MD14G1205100 Malus domestica HOM05D008369 ORTHO05D005932 7.3e-15 85.1 179 41.9
FAN18G3211 Fragaria x ananassa HOM05D008369 ORTHO05D005932 1.3e-11 74.3 168 36.9
Haze_07652 Corylus avellana HOM05D008369 ORTHO05D005932 1.9e-10 70.5 177 33.9
Ciclev10022335m.g Citrus clementina HOM05D008369 ORTHO05D005932 9.2e-10 68.2 174 36.2
FvH4_5g14530 Fragaria vesca HOM05D008369 ORTHO05D005932 1.2e-09 67.8 168 39.3
FAN08G2699 Fragaria x ananassa HOM05D008369 ORTHO05D005932 1.2e-09 67.8 192 36.5
COL.COLO4_36949 Corchorus olitorius HOM05D008369 ORTHO05D005932 2.1e-09 67.0 180 32.8
Cfa019277 Carpinus fangiana HOM05D008369 ORTHO05D005932 2.7e-09 66.6 172 37.2
Thecc.03G094300 Theobroma cacao HOM05D008369 ORTHO05D005932 2.7e-09 66.6 178 32.6
FAN13G2099 Fragaria x ananassa HOM05D008369 ORTHO05D005932 3.5e-09 66.2 169 38.5
TAR006G0004 Trochodendron aralioides HOM05D009095 ORTHO05D005932 4.6e-09 65.9 177 39.5
RcHm_v2.0_Chr7g0182121 Rosa chinensis HOM05D008369 ORTHO05D005932 7.8e-09 65.1 181 37.0
TAR622G0621 Trochodendron aralioides HOM05D034691 ORTHO05D005932 1.3e-08 64.3 174 31.6
Prupe.5G198500 Prunus persica HOM05D008369 ORTHO05D005932 1.5e-07 60.8 168 40.5
Nn3g17332 Nelumbo nucifera HOM05D009095 ORTHO05D005932 1.9e-07 60.5 177 31.6
Manes.06G089401 Manihot esculenta HOM05D000041 ORTHO05D006140 2.5e-07 60.1 174 33.9
Gorai.008G194900 Gossypium raimondii HOM05D008369 ORTHO05D005932 5.6e-07 58.9 197 32.5
Gohir.A12G179000 Gossypium hirsutum HOM05D008369 ORTHO05D005932 2.1e-06 57.0 165 33.9
Gohir.A11G032000 Gossypium hirsutum HOM05D008369 ORTHO05D005932 2.8e-06 56.6 176 32.4
CANSAT80G1936 Cannabis sativa HOM05D008369 ORTHO05D005932 4.7e-06 55.8 136 36.0
Lalb_Chr12g0196981 Lupinus albus HOM05D008369 ORTHO05D005932 4.7e-06 55.8 175 36.0
Duzib084G1416 Durio zibethinus HOM05D008369 ORTHO05D005932 8.1e-06 55.1 176 31.8
Gohir.D12G181600 Gossypium hirsutum HOM05D008369 ORTHO05D005932 8.1e-06 55.1 189 31.7
QL10p017723 Quercus lobata HOM05D008369 ORTHO05D005932 8.1e-06 55.1 186 32.8


User provided reference genes

Program Settings