Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG04G011570 Citrullus lanatus HOM05D007687 ORTHO05D009692 2.6e-286 988.0 495 100.0
MELO3C002053.2 Cucumis melo HOM05D007687 ORTHO05D009692 5.9e-73 279.3 233 67.0
Sed0010577 Sechium edule HOM05D007687 ORTHO05D009692 4.0e-61 240.0 260 56.5
CsaV3_1G006250 Cucumis sativus L. HOM05D007687 ORTHO05D009692 6.8e-61 239.2 212 63.7
QL10p020735 Quercus lobata HOM05D007687 ORTHO05D009692 1.2e-36 158.7 258 42.6
Thecc.03G108300 Theobroma cacao HOM05D007687 ORTHO05D009692 5.1e-32 143.3 246 41.9
TWI60G1328 Tripterygium wilfordii HOM05D007687 ORTHO05D009692 1.4e-29 135.2 271 37.3
Duzib205G1319 Durio zibethinus HOM05D007687 ORTHO05D009692 1.3e-27 128.6 233 40.3
Duzib084G0111 Durio zibethinus HOM05D007687 ORTHO05D009692 3.8e-27 127.1 247 36.8
Prupe.5G209900 Prunus persica HOM05D007687 ORTHO05D009692 8.4e-27 125.9 238 39.9
Manes.14G089000 Manihot esculenta HOM05D007687 ORTHO05D009692 4.6e-25 120.2 241 34.4
MD14G1216500 Malus domestica HOM05D007687 ORTHO05D009692 3.0e-24 117.5 313 34.8
Duzib068G1012 Durio zibethinus HOM05D007687 ORTHO05D009692 8.7e-24 115.9 246 36.2
Haze_19876 Corylus avellana HOM05D007687 ORTHO05D009692 1.9e-23 114.8 175 45.1
TAR629G0229 Trochodendron aralioides HOM05D007687 ORTHO05D009692 1.2e-22 112.1 255 35.3
CiPaw.15G114100 Carya illinoinensis HOM05D007687 ORTHO05D009692 2.8e-22 110.9 217 41.5
Atru.chr4.1593 Acer truncatum HOM05D007687 ORTHO05D009692 5.3e-21 106.7 211 40.8
COL.COLO4_27494 Corchorus olitorius HOM05D000180 ORTHO05D009692 2.6e-20 104.4 260 35.0
Dinv07975 Davidia involucrata HOM05D007687 ORTHO05D009692 2.6e-20 104.4 235 33.2
Peaxi162Scf00017g03282 Petunia axillaris HOM05D007687 ORTHO05D009692 2.2e-19 101.3 249 31.7
CAN.G982.38 Capsicum annuum HOM05D007687 ORTHO05D009692 4.9e-19 100.1 242 31.8
Nitab4.5_0002467g0050 Nicotiana tabacum HOM05D007687 ORTHO05D009692 4.9e-19 100.1 243 30.5
Oeu044771.1 Olea europaea HOM05D007687 ORTHO05D009692 1.1e-18 99.0 245 31.4
Potri.015G048600 Populus trichocarpa HOM05D007687 ORTHO05D009692 1.9e-18 98.2 280 33.2
Lj5A137T61 Lonicera japonica HOM05D007687 ORTHO05D009692 1.6e-17 95.1 242 32.2
Nn4g23535 Nelumbo nucifera HOM05D007687 ORTHO05D009692 5.1e-16 90.1 241 31.1
FvH4_5g13402 Fragaria vesca HOM05D007687 ORTHO05D009692 1.9e-15 88.2 261 31.8
FAN18G0959 Fragaria x ananassa HOM05D007687 ORTHO05D009692 1.9e-15 88.2 261 31.8
FAN08G0723 Fragaria x ananassa HOM05D007687 ORTHO05D009692 9.6e-15 85.9 262 32.4
Cpa.g.sc3.233 Carica papaya HOM05D007687 ORTHO05D009692 1.3e-14 85.5 194 35.1
Thhalv10004801m.g Eutrema salsugineum HOM05D007687 ORTHO05D009692 1.3e-14 85.5 238 32.4
Nitab4.5_0005994g0030 Nicotiana tabacum HOM05D007687 ORTHO05D009692 1.3e-14 85.5 147 36.7
Actinidia10442 Actinidia chinensis HOM05D007687 ORTHO05D009692 1.6e-14 85.1 240 33.8
Haze_18510 Corylus avellana HOM05D007687 ORTHO05D009692 4.8e-14 83.6 157 39.5
AT5G60880 Arabidopsis thaliana HOM05D007687 ORTHO05D009692 6.2e-14 83.2 242 31.0
BraA03t13781Z Brassica rapa HOM05D007687 ORTHO05D009692 8.1e-14 82.8 246 29.3
AL8G37500 Arabidopsis lyrata HOM05D007687 ORTHO05D009692 1.8e-13 81.6 242 31.4
FAN13G2354 Fragaria x ananassa HOM05D007687 ORTHO05D009692 1.8e-13 81.6 257 31.5
Sabra15G0078700 Salix brachista HOM05D007687 ORTHO05D009692 1.8e-13 81.6 259 31.7
Solyc03g114770.3 Solanum lycopersicum HOM05D007687 ORTHO05D009692 4.0e-13 80.5 241 29.9
BcaC06g33202 Brassica carinata HOM05D007687 ORTHO05D009692 5.3e-13 80.1 248 29.4
Ciclev10024235m.g Citrus clementina HOM05D007687 ORTHO05D009692 6.9e-13 79.7 218 32.1
Sp2g24190 Schrenkiella parvula HOM05D007687 ORTHO05D009692 6.9e-13 79.7 241 29.9
Gorai.006G268500 Gossypium raimondii HOM05D007687 ORTHO05D009692 9.0e-13 79.3 218 33.9
BcaNung02611 Brassica carinata HOM05D007687 ORTHO05D009692 1.2e-12 79.0 242 29.3
C07p44640 Brassica napus HOM05D007687 ORTHO05D009692 1.2e-12 79.0 242 29.3
Gohir.A09G243800 Gossypium hirsutum HOM05D007687 ORTHO05D009692 2.0e-12 78.2 232 33.2
BolC7t44987H Brassica oleracea HOM05D007687 ORTHO05D009692 1.3e-11 75.5 242 28.5
Cfa016835 Carpinus fangiana HOM05D007687 ORTHO05D009692 2.9e-11 74.3 143 39.9
Sopen03g033850 Solanum pennellii HOM05D007687 ORTHO05D009692 2.9e-11 74.3 241 29.0
Gohir.D09G244500 Gossypium hirsutum HOM05D007687 ORTHO05D009692 3.8e-11 73.9 184 33.7
Dinv17458 Davidia involucrata HOM05D007687 ORTHO05D009692 6.4e-11 73.2 160 35.0
CARHR274560 Cardamine hirsuta HOM05D007687 ORTHO05D009692 1.9e-10 71.6 240 30.0
A03p46570 Brassica napus HOM05D007687 ORTHO05D009692 7.1e-10 69.7 243 28.8
Gohir.D09G244550 Gossypium hirsutum HOM05D007687 ORTHO05D009692 9.3e-10 69.3 139 38.1
Manes.06G080900 Manihot esculenta HOM05D007687 ORTHO05D009692 9.3e-10 69.3 180 32.8
Gorai.006G268600 Gossypium raimondii HOM05D007687 ORTHO05D009692 3.5e-09 67.4 162 35.8
Actinidia04796 Actinidia chinensis HOM05D007687 ORTHO05D009692 1.8e-08 65.1 195 34.4
CANSAT56G1485 Cannabis sativa HOM05D007687 ORTHO05D009692 1.1e-07 62.4 152 33.6
Ca_21756_v3 Cicer arietinum L. HOM05D007687 ORTHO05D009692 1.9e-07 61.6 164 32.9
Lj4g0013896 Lotus japonicus HOM05D007687 ORTHO05D009692 1.9e-07 61.6 232 27.6
PGSC0003DMG400024621 Solanum tuberosum HOM05D007687 ORTHO05D009692 2.5e-07 61.2 194 28.9
Thhalv10015806m.g Eutrema salsugineum HOM05D007687 ORTHO05D009692 3.3e-07 60.8 235 28.1
CANSAT56G0292 Cannabis sativa HOM05D007687 ORTHO05D009692 5.6e-07 60.1 150 32.0
BcaC04g23476 Brassica carinata HOM05D007687 ORTHO05D009692 1.3e-06 58.9 236 26.7
BcaB04g19894 Brassica carinata HOM05D007687 ORTHO05D009692 1.6e-06 58.5 256 26.2
C09p07960 Brassica napus HOM05D007687 ORTHO05D009692 3.7e-06 57.4 236 26.7
THA.LOC104801051 Tarenaya hassleriana HOM05D007687 ORTHO05D009692 3.7e-06 57.4 240 28.8
BolC9t53708H Brassica oleracea HOM05D007687 ORTHO05D009692 8.1e-06 56.2 236 26.3


User provided reference genes

Program Settings