Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG04G011470 Citrullus lanatus HOM05D014519 ORTHO05D006336 1.2e-65 253.4 164 100.0
ClCG04G011480 Citrullus lanatus HOM05D014519 ORTHO05D006336 5.7e-49 198.0 129 81.4
Sed0019610 Sechium edule HOM05D014519 ORTHO05D006336 1.5e-28 130.2 133 54.1
CsaV3_1G006320 Cucumis sativus L. HOM05D014519 ORTHO05D006336 2.2e-24 116.3 98 64.3
Sed0003907 Sechium edule HOM05D014519 ORTHO05D006336 5.6e-20 101.7 98 53.1
Sed0012100 Sechium edule HOM05D014519 ORTHO05D006336 4.4e-17 92.0 99 49.5
CsaV3_3G044280 Cucumis sativus L. HOM05D014519 ORTHO05D006336 7.6e-17 91.3 77 64.9
ClCG04G011490 Citrullus lanatus HOM05D014519 ORTHO05D006336 4.2e-15 85.5 91 50.5
QL07p042995 Quercus lobata HOM05D007277 ORTHO05D006336 1.2e-11 73.9 108 40.7
Thecc.03G110900 Theobroma cacao HOM05D007277 ORTHO05D006336 6.2e-11 71.6 89 46.1
QL07p042879 Quercus lobata HOM05D007277 ORTHO05D006336 8.1e-11 71.2 110 39.1
FvH4_5g13221 Fragaria vesca HOM05D007277 ORTHO05D006336 1.5e-09 67.0 91 35.2
Gohir.A07G058000 Gossypium hirsutum HOM05D007277 ORTHO05D006336 2.6e-09 66.2 89 42.7
CsaV3_1G006330 Cucumis sativus L. HOM05D014519 ORTHO05D006336 3.4e-09 65.9 53 71.7
FAN08G1781 Fragaria x ananassa HOM05D007277 ORTHO05D006336 4.4e-09 65.5 87 37.9
FvH4_5g13230 Fragaria vesca HOM05D007277 ORTHO05D006336 9.9e-09 64.3 83 41.0
Thecc.03G111200 Theobroma cacao HOM05D007277 ORTHO05D006336 9.9e-09 64.3 89 42.7
COL.COLO4_28831 Corchorus olitorius HOM05D007277 ORTHO05D006336 1.7e-08 63.5 90 45.6
FvH4_5g13170 Fragaria vesca HOM05D007277 ORTHO05D006336 2.2e-08 63.2 83 39.8
FAN18G2501 Fragaria x ananassa HOM05D007277 ORTHO05D006336 2.9e-08 62.8 83 39.8
FAN18G2870 Fragaria x ananassa HOM05D000423 ORTHO05D000284 2.9e-08 62.8 83 39.8
FvH4_5g13140 Fragaria vesca HOM05D007277 ORTHO05D006336 3.8e-08 62.4 83 39.8
FAN18G3246 Fragaria x ananassa HOM05D007277 ORTHO05D006336 3.8e-08 62.4 83 39.8
RcHm_v2.0_Chr7g0241491 Rosa chinensis HOM05D007277 ORTHO05D006336 3.8e-08 62.4 86 36.0
Ciclev10024167m.g Citrus clementina HOM05D007277 ORTHO05D006336 8.4e-08 61.2 93 35.5
FvH4_5g13130 Fragaria vesca HOM05D007277 ORTHO05D006336 8.4e-08 61.2 83 38.6
FvH4_5g13190 Fragaria vesca HOM05D007277 ORTHO05D013598 8.4e-08 61.2 83 38.6
FAN18G0686 Fragaria x ananassa HOM05D007277 ORTHO05D006336 8.4e-08 61.2 83 38.6
FAN08G1790 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.1e-07 60.8 83 39.8
QL07p042928 Quercus lobata HOM05D007277 ORTHO05D006336 1.1e-07 60.8 102 38.2
Gohir.D07G062800 Gossypium hirsutum HOM05D007277 ORTHO05D006336 1.9e-07 60.1 89 39.3
TAR636G3203 Trochodendron aralioides HOM05D012741 ORTHO05D006336 1.9e-07 60.1 90 38.9
QL07p042983 Quercus lobata HOM05D007277 ORTHO05D006336 2.4e-07 59.7 89 34.8
RcHm_v2.0_Chr7g0240781 Rosa chinensis HOM05D007277 ORTHO05D006336 2.4e-07 59.7 86 34.9
FvH4_5g13220 Fragaria vesca HOM05D007277 ORTHO05D006336 4.2e-07 58.9 87 39.1
QL07p042903 Quercus lobata HOM05D007277 ORTHO05D006336 4.2e-07 58.9 100 37.0
QL07p042908 Quercus lobata HOM05D007277 ORTHO05D006336 5.4e-07 58.5 91 35.2
QL07p042964 Quercus lobata HOM05D007277 ORTHO05D006336 9.3e-07 57.8 64 40.6
Ciclev10029817m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.2e-06 57.4 93 34.4
TAR636G0488 Trochodendron aralioides HOM05D000568 ORTHO05D000628 2.1e-06 56.6 90 36.7
MD03G1010100 Malus domestica HOM05D007277 ORTHO05D006336 2.7e-06 56.2 92 34.8
QL10p052020 Quercus lobata HOM05D007277 ORTHO05D006336 2.7e-06 56.2 91 36.3
Haze_24862 Corylus avellana HOM05D007277 ORTHO05D006336 4.6e-06 55.5 95 32.6
Prupe.1G109400 Prunus persica HOM05D007277 ORTHO05D006336 7.8e-06 54.7 110 30.9
QL07p042874 Quercus lobata HOM05D007277 ORTHO05D006336 7.8e-06 54.7 89 37.1
TAR636G1074 Trochodendron aralioides HOM05D012741 ORTHO05D006336 7.8e-06 54.7 90 35.6
TAR636G2604 Trochodendron aralioides HOM05D012741 ORTHO05D006336 7.8e-06 54.7 90 37.8


User provided reference genes

Program Settings