Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG04G010920 Citrullus lanatus HOM05D008114 ORTHO05D010089 7.9e-30 133.3 66 100.0
CsaV3_1G006920 Cucumis sativus L. HOM05D008114 ORTHO05D010089 2.2e-24 115.2 66 83.3
MELO3C002108.2 Cucumis melo HOM05D008114 ORTHO05D010089 8.5e-24 113.2 66 80.3
Sed0001808 Sechium edule HOM05D008114 ORTHO05D010089 7.4e-20 100.1 66 77.3
Prupe.5G224700 Prunus persica HOM05D008114 ORTHO05D010089 2.6e-12 75.1 67 55.2
TAR371G0741 Trochodendron aralioides HOM05D008114 ORTHO05D010089 2.2e-11 72.0 66 51.5
TAR535G0009 Trochodendron aralioides HOM05D008114 ORTHO05D010089 2.2e-11 72.0 69 53.6
QL10p026513 Quercus lobata HOM05D008114 ORTHO05D010089 2.8e-11 71.6 66 54.5
Thecc.03G040900 Theobroma cacao HOM05D008114 ORTHO05D010089 2.8e-11 71.6 61 59.0
FAN04G2580 Fragaria x ananassa HOM05D008114 ORTHO05D010089 6.3e-11 70.5 69 56.5
FAN08G3365 Fragaria x ananassa HOM05D008114 ORTHO05D010089 8.3e-11 70.1 69 55.1
Haze_18729 Corylus avellana HOM05D008114 ORTHO05D010089 1.1e-10 69.7 66 54.5
FAN18G3335 Fragaria x ananassa HOM05D008114 ORTHO05D010089 1.1e-10 69.7 69 55.1
Duzib205G1811 Durio zibethinus HOM05D008114 ORTHO05D010089 1.8e-10 68.9 47 59.6
Potri.012G054000 Populus trichocarpa HOM05D008114 ORTHO05D010089 1.8e-10 68.9 66 48.5
Sabra12G0037800 Salix brachista HOM05D008114 ORTHO05D010089 1.8e-10 68.9 66 50.0
Cfa019734 Carpinus fangiana HOM05D008114 ORTHO05D010089 2.4e-10 68.6 66 54.5
CiPaw.16G088900 Carya illinoinensis HOM05D008114 ORTHO05D010089 3.1e-10 68.2 66 54.5
Dinv12222 Davidia involucrata HOM05D008114 ORTHO05D010089 4.1e-10 67.8 49 63.3
TAR374G0456 Trochodendron aralioides HOM05D008114 ORTHO05D010089 9.1e-10 66.6 66 53.0
Gohir.D09G050800 Gossypium hirsutum HOM05D008114 ORTHO05D010089 1.6e-09 65.9 66 48.5
Gorai.006G058900 Gossypium raimondii HOM05D008114 ORTHO05D010089 1.6e-09 65.9 66 48.5
TAR426G0004 Trochodendron aralioides HOM05D008114 ORTHO05D010089 2.7e-09 65.1 44 68.2
RcHm_v2.0_Chr4g0434421 Rosa chinensis HOM05D008114 ORTHO05D010089 4.5e-09 64.3 67 50.7
FAN17G1195 Fragaria x ananassa HOM05D008114 ORTHO05D010089 5.0e-08 60.8 69 50.7
FAN22G0519 Fragaria x ananassa HOM05D008114 ORTHO05D010089 8.5e-08 60.1 68 45.6
CSS0032238 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 1.1e-07 59.7 43 58.1
Atru.chr11.236 Acer truncatum HOM05D008114 ORTHO05D010089 1.9e-07 58.9 67 50.7
Atru.chr9.903 Acer truncatum HOM05D008114 ORTHO05D010089 1.9e-07 58.9 65 46.2
Hma1.2p1_1283F.1_g272780 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 1.9e-07 58.9 59 47.5
TAR622G0804 Trochodendron aralioides HOM05D008114 ORTHO05D010089 4.2e-07 57.8 66 45.5
TAR622G1122 Trochodendron aralioides HOM05D008114 ORTHO05D010089 4.2e-07 57.8 66 45.5
FAN12G0147 Fragaria x ananassa HOM05D008114 ORTHO05D010089 7.2e-07 57.0 68 47.1
Rhsim12G0141700 Rhododendron simsii HOM05D008114 ORTHO05D010089 7.2e-07 57.0 67 44.8
FAN07G1623 Fragaria x ananassa HOM05D008114 ORTHO05D010089 9.4e-07 56.6 69 47.8
Manes.05G132900 Manihot esculenta HOM05D008114 ORTHO05D010089 9.4e-07 56.6 66 47.0
Manes.14G106800 Manihot esculenta HOM05D008114 ORTHO05D010089 9.4e-07 56.6 48 52.1
Nn4g23952 Nelumbo nucifera HOM05D008114 ORTHO05D010089 1.2e-06 56.2 55 50.9
Glyma.09G180700 Glycine max HOM05D008114 ORTHO05D010089 1.6e-06 55.8 64 45.3
CSS0047992 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 2.7e-06 55.1 47 53.2
Glyma.07G097200 Glycine max HOM05D008114 ORTHO05D010089 4.7e-06 54.3 45 53.3
Hma1.2p1_1314F.1_g275000 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 4.7e-06 54.3 67 38.8
Hma1.2p1_2306F.1_g319355 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 4.7e-06 54.3 67 38.8
COL.COLO4_32149 Corchorus olitorius HOM05D008114 ORTHO05D010089 6.1e-06 53.9 64 37.5


User provided reference genes

Program Settings