Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 2.7e-94 348.6 167 100.0
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 7.6e-81 303.9 163 87.7
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 1.3e-80 303.1 167 88.0
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 5.4e-79 297.7 166 84.3
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 9.9e-57 223.8 166 62.0
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 3.8e-56 221.9 155 67.1
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 5.5e-55 218.0 152 64.5
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 7.1e-55 217.6 167 62.9
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 2.1e-54 216.1 157 63.7
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 3.5e-54 215.3 166 62.0
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 4.6e-54 214.9 156 62.8
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 6.0e-54 214.5 148 63.5
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 6.0e-54 214.5 148 64.9
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 7.9e-54 214.2 148 64.9
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 3.0e-53 212.2 159 60.4
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 3.9e-53 211.8 167 60.5
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 5.1e-53 211.5 165 60.6
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 5.1e-53 211.5 168 61.9
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 6.7e-53 211.1 156 62.2
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 6.7e-53 211.1 151 62.9
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 8.7e-53 210.7 142 66.9
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 1.5e-52 209.9 155 62.6
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.5e-52 209.9 155 62.6
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 1.5e-52 209.9 159 63.5
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 2.5e-52 209.1 169 59.2
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 4.3e-52 208.4 133 69.2
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 9.6e-52 207.2 159 60.4
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 1.3e-51 206.8 144 66.7
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 1.3e-51 206.8 129 68.2
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 1.6e-51 206.5 165 60.6
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 2.1e-51 206.1 163 60.7
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 2.1e-51 206.1 160 60.0
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 2.1e-51 206.1 144 66.7
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 2.8e-51 205.7 148 61.5
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 3.7e-51 205.3 166 58.4
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 3.7e-51 205.3 161 59.6
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 3.7e-51 205.3 128 71.1
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 3.7e-51 205.3 155 58.7
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 3.7e-51 205.3 155 61.9
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 6.2e-51 204.5 126 70.6
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 8.2e-51 204.1 162 58.6
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 8.2e-51 204.1 167 55.1
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 1.1e-50 203.8 157 60.5
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 1.1e-50 203.8 157 60.5
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 1.8e-50 203.0 138 63.8
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 1.8e-50 203.0 168 58.3
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 1.8e-50 203.0 126 69.8
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 1.8e-50 203.0 128 68.0
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 2.4e-50 202.6 168 58.3
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 2.4e-50 202.6 173 56.1
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 4.0e-50 201.8 144 64.6
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 5.3e-50 201.4 132 65.9
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 9.0e-50 200.7 157 59.2
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 1.2e-49 200.3 167 58.1
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 1.2e-49 200.3 157 58.6
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 1.2e-49 200.3 119 73.9
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 1.2e-49 200.3 126 69.0
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 1.5e-49 199.9 129 67.4
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 1.5e-49 199.9 169 56.8
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 2.6e-49 199.1 156 60.9
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 3.4e-49 198.7 176 54.0
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 4.5e-49 198.4 167 53.9
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 5.8e-49 198.0 169 57.4
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 1.0e-48 197.2 118 70.3
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 2.2e-48 196.1 166 56.0
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 2.2e-48 196.1 169 55.0
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 2.9e-48 195.7 166 56.0
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 4.9e-48 194.9 168 57.1
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 8.4e-48 194.1 167 55.1
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 1.1e-47 193.7 172 55.2
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 1.4e-47 193.4 167 55.7
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 3.2e-47 192.2 140 58.6
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 5.1e-45 184.9 167 54.5
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 3.3e-44 182.2 166 54.2
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 1.3e-43 180.3 128 61.7
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 4.8e-43 178.3 160 52.5
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 9.0e-42 174.1 135 59.3
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 2.0e-41 172.9 125 61.6
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 7.6e-41 171.0 122 61.5
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 2.9e-40 169.1 143 55.2
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 1.4e-39 166.8 123 61.8
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 6.7e-37 157.9 107 60.7
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 6.7e-37 157.9 139 54.7
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 2.5e-36 156.0 117 57.3
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 9.7e-36 154.1 151 45.0
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 2.8e-35 152.5 176 46.0
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 6.3e-35 151.4 149 50.3
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 9.1e-34 147.5 168 47.6
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 2.6e-33 146.0 160 47.5
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 3.4e-33 145.6 149 49.0
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 2.2e-32 142.9 160 46.9
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 2.9e-32 142.5 87 71.3
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 2.9e-32 142.5 163 47.2
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 4.2e-31 138.7 158 41.1
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 9.7e-28 127.5 87 62.1
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 6.9e-26 121.3 90 60.0
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 3.8e-16 89.0 63 63.5
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 5.5e-15 85.1 81 51.9
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 9.4e-15 84.3 77 49.4
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 2.0e-12 76.6 49 69.4
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 4.8e-11 72.0 128 30.5


User provided reference genes

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