Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG04G007010 Citrullus lanatus HOM05D007481 ORTHO05D009444 1.1e-141 506.5 245 100.0
CsaV3_4G026270 Cucumis sativus L. HOM05D007481 ORTHO05D009444 2.9e-129 465.3 245 92.2
Sed0020862 Sechium edule HOM05D007481 ORTHO05D009444 3.3e-117 425.2 244 83.2
CiPaw.10G156500 Carya illinoinensis HOM05D007481 ORTHO05D009444 2.5e-104 382.5 244 76.2
Gohir.D09G160700 Gossypium hirsutum HOM05D007481 ORTHO05D009444 7.9e-103 377.5 247 74.1
GSVIVG01033961001 Vitis vinifera HOM05D007481 ORTHO05D009444 3.9e-102 375.2 247 74.5
FAN05G5358 Fragaria x ananassa HOM05D007481 ORTHO05D009444 3.3e-101 372.1 246 74.0
Thecc.05G016400 Theobroma cacao HOM05D007481 ORTHO05D009444 5.7e-101 371.3 246 73.6
RcHm_v2.0_Chr3g0463171 Rosa chinensis HOM05D007481 ORTHO05D009444 1.3e-100 370.2 246 74.0
QL07p035708 Quercus lobata HOM05D007481 ORTHO05D009444 2.1e-100 369.4 244 73.8
COL.COLO4_14539 Corchorus olitorius HOM05D007481 ORTHO05D009444 3.7e-100 368.6 251 72.5
MELO3C003292.2 Cucumis melo HOM05D007481 ORTHO05D009444 1.4e-99 366.7 194 92.3
Gorai.006G182400 Gossypium raimondii HOM05D007481 ORTHO05D009444 1.5e-98 363.2 282 64.5
Potri.006G100100 Populus trichocarpa HOM05D007481 ORTHO05D009444 2.0e-98 362.8 244 72.1
Peaxi162Scf00009g01813 Petunia axillaris HOM05D007481 ORTHO05D009444 2.9e-97 359.0 245 69.8
CSS0016102 Camellia sinensis var. sinensis HOM05D007481 ORTHO05D009444 3.8e-97 358.6 247 70.4
CANSAT35G1044 Cannabis sativa HOM05D007481 ORTHO05D009444 3.8e-97 358.6 246 69.9
Cfa017210 Carpinus fangiana HOM05D007481 ORTHO05D009444 3.8e-97 358.6 220 75.0
Prupe.6G277100 Prunus persica HOM05D007481 ORTHO05D009444 5.0e-97 358.2 244 70.1
PGR031G3607 Punica granatum HOM05D007481 ORTHO05D009444 5.0e-97 358.2 241 73.4
FAN02G0465 Fragaria x ananassa HOM05D007481 ORTHO05D009444 8.5e-97 357.5 238 73.9
Manes.09G104600 Manihot esculenta HOM05D007481 ORTHO05D009444 2.5e-96 355.9 243 72.4
Eucgr.B02817 Eucalyptus grandis HOM05D007481 ORTHO05D009444 3.2e-96 355.5 248 69.4
Sabra06G0076900 Salix brachista HOM05D007481 ORTHO05D009444 3.2e-96 355.5 244 70.9
MD04G1152000 Malus domestica HOM05D007481 ORTHO05D009444 4.2e-96 355.1 247 69.6
Dinv04699 Davidia involucrata HOM05D007481 ORTHO05D009444 7.2e-96 354.4 249 71.9
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 7.2e-96 354.4 240 71.2
Actinidia11588 Actinidia chinensis HOM05D007481 ORTHO05D009444 9.3e-96 354.0 247 70.4
HanXRQChr01g0007111 Helianthus annuus HOM05D007481 ORTHO05D009444 1.6e-95 353.2 243 70.8
AL6G10600 Arabidopsis lyrata HOM05D007481 ORTHO05D009444 2.7e-95 352.4 242 71.1
Medtr4g012440 Medicago truncatula HOM05D007481 ORTHO05D009444 2.7e-95 352.4 249 69.9
Cc06_g01380 Coffea canephora HOM05D007481 ORTHO05D009444 4.6e-95 351.7 245 70.6
Nn2g13707 Nelumbo nucifera HOM05D007481 ORTHO05D009444 4.6e-95 351.7 247 69.6
TWI74G0365 Tripterygium wilfordii HOM05D007481 ORTHO05D009444 6.1e-95 351.3 243 71.2
Glyma.03G058200 Glycine max HOM05D007481 ORTHO05D009444 1.3e-94 350.1 246 70.7
PGSC0003DMG400011097 Solanum tuberosum HOM05D007481 ORTHO05D009444 1.8e-94 349.7 247 67.6
AT5G01470 Arabidopsis thaliana HOM05D007481 ORTHO05D009444 2.3e-94 349.4 244 69.3
Solyc10g085160.2 Solanum lycopersicum HOM05D007481 ORTHO05D009444 2.3e-94 349.4 245 68.2
Sopen10g034630 Solanum pennellii HOM05D007481 ORTHO05D009444 2.3e-94 349.4 244 67.2
Aa31LG1G23100 Aethionema arabicum HOM05D007481 ORTHO05D009444 3.9e-94 348.6 244 68.9
CAN.G616.2 Capsicum annuum HOM05D007481 ORTHO05D009444 5.1e-94 348.2 247 68.4
CARHR211840 Cardamine hirsuta HOM05D007481 ORTHO05D009444 5.1e-94 348.2 247 67.6
Migut.L02012 Erythranthe guttata HOM05D007481 ORTHO05D009444 1.1e-93 347.1 240 70.8
Phvul.010G001400 Phaseolus vulgaris HOM05D007481 ORTHO05D009444 1.1e-93 347.1 246 68.7
Sp6g40760 Schrenkiella parvula HOM05D007481 ORTHO05D009444 1.1e-93 347.1 247 68.8
Nitab4.5_0003666g0020 Nicotiana tabacum HOM05D007481 ORTHO05D009444 1.5e-93 346.7 244 68.0
MSTRG.10219 Avicennia marina HOM05D007481 ORTHO05D009444 3.3e-93 345.5 252 66.7
BcaB05g21923 Brassica carinata HOM05D007481 ORTHO05D009444 3.3e-93 345.5 245 68.6
THA.LOC104816191 Tarenaya hassleriana HOM05D007481 ORTHO05D009444 4.3e-93 345.1 248 67.7
C02p00150 Brassica napus HOM05D007481 ORTHO05D009444 5.7e-93 344.7 245 68.2
Lalb_Chr07g0193571 Lupinus albus HOM05D007481 ORTHO05D009444 7.4e-93 344.4 243 70.4
Carub.0006s0036 Capsella rubella HOM05D007481 ORTHO05D009444 1.6e-92 343.2 242 67.8
Nitab4.5_0003024g0060 Nicotiana tabacum HOM05D007481 ORTHO05D009444 2.2e-92 342.8 258 65.1
Thhalv10014504m.g Eutrema salsugineum HOM05D007481 ORTHO05D009444 2.8e-92 342.4 243 68.3
arahy.Tifrunner.gnm1.ann1.7RHW31 Arachis hypogaea HOM05D007481 ORTHO05D009444 3.7e-92 342.0 245 67.8
BolC2t06012H Brassica oleracea HOM05D007481 ORTHO05D009444 3.7e-92 342.0 245 67.3
Ciclev10012584m.g Citrus clementina HOM05D007481 ORTHO05D009444 4.8e-92 341.7 244 68.4
PSO801G0715 Papaver somniferum HOM05D007481 ORTHO05D009444 4.8e-92 341.7 240 66.7
ECA248G3524 Erigeron canadensis HOM05D007481 ORTHO05D009444 6.3e-92 341.3 240 68.3
BraA02t04685Z Brassica rapa HOM05D007481 ORTHO05D009444 8.2e-92 340.9 245 67.3
BcaC03g13078 Brassica carinata HOM05D007481 ORTHO05D009444 1.1e-91 340.5 245 67.3
FAN14G0098 Fragaria x ananassa HOM05D007481 ORTHO05D009444 3.1e-91 339.0 306 58.8
Aqoxy2G00902 Aquilegia oxysepala HOM05D007481 ORTHO05D009444 5.3e-91 338.2 243 66.7
Lj3g0018029 Lotus japonicus HOM05D007481 ORTHO05D009444 9.1e-91 337.4 243 69.1
PSO339G5056 Papaver somniferum HOM05D007481 ORTHO05D009444 2.6e-90 335.9 244 66.8
Sc07g0006570 Simmondsia chinensis HOM05D007481 ORTHO05D009444 2.6e-90 335.9 244 68.4
Psat7g244960 Pisum sativum HOM05D007481 ORTHO05D009444 7.7e-90 334.3 249 65.9
Ca_20231_v3 Cicer arietinum L. HOM05D007481 ORTHO05D009444 1.0e-89 334.0 242 66.5
TPR.G13336 Trifolium pratense HOM05D007481 ORTHO05D009444 1.0e-89 334.0 249 67.1
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.1e-88 330.5 258 62.8
FAN09G2325 Fragaria x ananassa HOM05D007481 ORTHO05D009444 9.4e-88 327.4 246 67.9
Lj3A953G52 Lonicera japonica HOM05D007481 ORTHO05D009444 1.0e-86 323.9 245 66.9
unitig_736.g22787 Utricularia gibba HOM05D007481 ORTHO05D009444 1.8e-86 323.2 233 67.0
Duzib093G0021 Durio zibethinus HOM05D007481 ORTHO05D009444 2.6e-85 319.3 206 73.3
arahy.Tifrunner.gnm1.ann1.6XTR6T Arachis hypogaea HOM05D007481 ORTHO05D009444 7.4e-85 317.8 242 65.3
ATR0618G339 Amborella trichopoda HOM05D007481 ORTHO05D009444 3.1e-83 312.4 244 63.1
vmacro20262 Vaccinium macrocarpon HOM05D007481 ORTHO05D009444 2.1e-79 299.7 253 64.0
FvH4_6g11480 Fragaria vesca HOM05D007481 ORTHO05D009444 4.7e-79 298.5 200 73.0
Hund11009 Selenicereus undatus HOM05D007481 ORTHO05D009444 7.9e-79 297.7 269 58.4
Gohir.A09G165100 Gossypium hirsutum HOM05D007481 ORTHO05D009444 1.0e-78 297.4 197 73.1
Os03g0826700 Oryza sativa ssp. japonica HOM05D007481 ORTHO05D009444 2.3e-78 296.2 253 60.9
Lsat_1_v5_gn_5_149561 Lactuca sativa HOM05D007481 ORTHO05D009444 1.1e-77 293.9 240 61.7
Rhsim05G0214800 Rhododendron simsii HOM05D007481 ORTHO05D009444 2.6e-77 292.7 302 53.3
Zm00001eb063270 Zea mays HOM05D007481 ORTHO05D009444 1.8e-75 286.6 253 55.3
SEGI_08492 Sequoiadendron giganteum HOM05D007481 ORTHO05D009444 2.0e-74 283.1 280 51.4
SalBow4G1731 Salvia bowleyana HOM05D007481 ORTHO05D009444 5.9e-74 281.6 195 69.2
Haze_20985 Corylus avellana HOM05D007481 ORTHO05D009444 1.6e-71 273.5 250 58.4
CDE02G3625 Ceratophyllum demersum HOM05D007481 ORTHO05D009444 8.0e-71 271.2 184 72.3
Cpa.g.sc11.154 Carica papaya HOM05D007481 ORTHO05D009444 1.4e-70 270.4 248 57.7
Pp3c17_21930 Physcomitrium patens HOM05D007481 ORTHO05D009444 3.3e-69 265.8 271 53.1
SMO119G0350 Selaginella moellendorffii HOM05D007481 ORTHO05D009444 5.3e-67 258.5 210 59.5
TAR633G1799 Trochodendron aralioides HOM05D007481 ORTHO05D009444 5.3e-67 258.5 243 54.3
CBR_g4113 Chara braunii HOM05D007481 ORTHO05D009444 7.0e-67 258.1 283 48.8
Mapoly0103s0024 Marchantia polymorpha HOM05D007481 ORTHO05D009444 7.7e-66 254.6 269 51.3
AagrBONN_evm.TU.Sc2ySwM_228.1780 Anthoceros agrestis HOM05D007481 ORTHO05D009444 1.3e-65 253.8 211 57.3
FAN14G2270 Fragaria x ananassa HOM05D000872 ORTHO05D000777 7.5e-61 238.0 291 49.5
MBI14_g30737_MAGBIO Magnolia biondii HOM05D007481 ORTHO05D009444 1.2e-55 220.7 251 49.0
DCAR_015418 Daucus carota HOM05D007481 ORTHO05D009444 3.7e-52 209.1 137 73.0
VMungo0331G0457 Vigna mungo HOM05D007481 ORTHO05D009444 7.3e-48 194.9 135 69.6
HPP92_003771 Vanilla planifolia HOM05D007481 ORTHO05D009444 9.8e-45 184.5 209 49.3
Atru.chr8.2241 Acer truncatum HOM05D007481 ORTHO05D009444 1.6e-39 167.2 116 68.1
Oeu006297.1 Olea europaea HOM05D007481 ORTHO05D009444 1.4e-27 127.5 86 73.3
EL10Ac5g12562 Beta vulgaris HOM05D007481 ORTHO05D009444 1.7e-25 120.6 95 66.3
Eucgr.B02818 Eucalyptus grandis HOM05D007481 ORTHO05D009444 8.4e-20 101.7 90 56.7
AUR62030437 Chenopodium quinoa HOM05D007481 ORTHO05D009444 2.9e-12 76.6 41 80.5
PSO541G1183 Papaver somniferum HOM05D006745 ORTHO05D008449 3.3e-08 63.2 173 26.0
SMO307G0066 Selaginella moellendorffii HOM05D002553 ORTHO05D002767 4.0e-06 56.2 135 28.1
Pp3c26_2100 Physcomitrium patens HOM05D001602 ORTHO05D001470 5.3e-06 55.8 121 27.3
Actinidia19186 Actinidia chinensis HOM05D005677 ORTHO05D006966 9.0e-06 55.1 190 27.4


User provided reference genes

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