Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG04G006100 Citrullus lanatus HOM05D007287 ORTHO05D008965 1.5e-127 459.5 234 100.0
CsaV3_4G027460 Cucumis sativus L. HOM05D007287 ORTHO05D008965 4.3e-114 414.8 234 91.5
MELO3C025269.2 Cucumis melo HOM05D007287 ORTHO05D008965 4.0e-88 328.6 226 78.8
Sed0017124 Sechium edule HOM05D007287 ORTHO05D008965 1.7e-86 323.2 246 74.0
Manes.08G167300 Manihot esculenta HOM05D007287 ORTHO05D008965 1.1e-42 177.6 235 46.8
Manes.09G120600 Manihot esculenta HOM05D007287 ORTHO05D008965 4.8e-41 172.2 240 45.8
Cfa016991 Carpinus fangiana HOM05D007287 ORTHO05D008965 6.5e-38 161.8 234 46.2
Haze_21214 Corylus avellana HOM05D007287 ORTHO05D008965 1.9e-37 160.2 237 44.7
Thecc.04G001200 Theobroma cacao HOM05D007287 ORTHO05D008965 2.7e-36 156.4 242 43.4
TWI74G0480 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 7.9e-36 154.8 195 50.3
Ciclev10012636m.g Citrus clementina HOM05D007287 ORTHO05D008965 1.5e-34 150.6 244 41.0
Prupe.6G299000 Prunus persica HOM05D007287 ORTHO05D008965 3.3e-34 149.4 200 48.0
GSVIVG01029850001 Vitis vinifera HOM05D007287 ORTHO05D008965 4.4e-34 149.1 239 43.5
Glyma.03G000900 Glycine max HOM05D007287 ORTHO05D008965 7.4e-34 148.3 197 48.7
Atru.chr8.50 Acer truncatum HOM05D007287 ORTHO05D008965 1.7e-33 147.1 249 41.0
Potri.016G142100 Populus trichocarpa HOM05D007287 ORTHO05D008965 1.7e-33 147.1 236 41.9
RcHm_v2.0_Chr3g0459671 Rosa chinensis HOM05D007287 ORTHO05D008965 6.3e-33 145.2 240 42.9
QL07p031465 Quercus lobata HOM05D007287 ORTHO05D008965 1.1e-32 144.4 243 41.2
Dinv16928 Davidia involucrata HOM05D007287 ORTHO05D008965 1.4e-32 144.1 242 44.2
Sabra04G0158300 Salix brachista HOM05D007287 ORTHO05D008965 1.4e-32 144.1 224 41.5
QL07p030582 Quercus lobata HOM05D007287 ORTHO05D008965 3.1e-32 142.9 243 40.7
Glyma.16G221800 Glycine max HOM05D007287 ORTHO05D008965 9.1e-32 141.4 197 45.7
FvH4_6g09290 Fragaria vesca HOM05D007287 ORTHO05D008965 3.5e-31 139.4 232 40.9
Sabra06G0087700 Salix brachista HOM05D007287 ORTHO05D008965 1.3e-30 137.5 236 38.6
TWI77G0104 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 1.3e-30 137.5 244 39.8
Nn5g26760 Nelumbo nucifera HOM05D007287 ORTHO05D008965 2.9e-30 136.3 233 43.8
Lsat_1_v5_gn_5_153761 Lactuca sativa HOM05D007287 ORTHO05D008965 6.5e-30 135.2 199 43.2
FAN09G3442 Fragaria x ananassa HOM05D007287 ORTHO05D008965 8.5e-30 134.8 206 43.2
Potri.006G112600 Populus trichocarpa HOM05D007287 ORTHO05D008965 1.1e-29 134.4 236 39.0
MD04G1179200 Malus domestica HOM05D007287 ORTHO05D008965 5.5e-29 132.1 231 44.2
ECA248G0550 Erigeron canadensis HOM05D007287 ORTHO05D008965 1.2e-28 131.0 241 40.2
Cpa.g.sc60.59 Carica papaya HOM05D007287 ORTHO05D008965 1.0e-27 127.9 233 41.6
Duzib268G0768 Durio zibethinus HOM05D007287 ORTHO05D008965 1.0e-27 127.9 242 37.6
VMungo0331G1821 Vigna mungo HOM05D007287 ORTHO05D008965 1.8e-27 127.1 198 42.9
Rhsim04G0120200 Rhododendron simsii HOM05D007287 ORTHO05D008965 2.3e-27 126.7 253 41.1
CSS0006882 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 3.0e-27 126.3 202 46.5
CSS0027605 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 3.0e-27 126.3 202 46.5
Gohir.A02G000300 Gossypium hirsutum HOM05D007287 ORTHO05D008965 6.7e-27 125.2 242 39.7
Gorai.005G001000 Gossypium raimondii HOM05D007287 ORTHO05D008965 1.5e-26 124.0 241 38.2
Gohir.D02G000600 Gossypium hirsutum HOM05D007287 ORTHO05D008965 2.0e-26 123.6 240 38.3
Eucgr.K01309 Eucalyptus grandis HOM05D007287 ORTHO05D008965 3.3e-26 122.9 200 40.5
vmacro08958 Vaccinium macrocarpon HOM05D007287 ORTHO05D008965 4.4e-26 122.5 251 39.8
Phvul.010G060000 Phaseolus vulgaris HOM05D007287 ORTHO05D008965 9.7e-26 121.3 200 43.0
Peaxi162Scf00732g00008 Petunia axillaris HOM05D007287 ORTHO05D008965 2.4e-24 116.7 232 39.2
Lj3g0024711 Lotus japonicus HOM05D007287 ORTHO05D008965 9.1e-24 114.8 210 41.0
TAR633G2304 Trochodendron aralioides HOM05D007287 ORTHO05D008965 2.0e-23 113.6 218 39.9
Actinidia20808 Actinidia chinensis HOM05D007287 ORTHO05D008965 7.7e-23 111.7 195 42.6
Oeu039292.1 Olea europaea HOM05D007287 ORTHO05D008965 2.2e-22 110.2 201 40.3
CANSAT01G2619 Cannabis sativa HOM05D007287 ORTHO05D008965 3.8e-22 109.4 213 38.0
TWI53G0571 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 8.5e-22 108.2 185 43.2
FAN02G3892 Fragaria x ananassa HOM05D001484 ORTHO05D008965 2.5e-21 106.7 189 39.7
Sc20g0007340 Simmondsia chinensis HOM05D007287 ORTHO05D008965 4.2e-21 105.9 202 37.6
Sc20g0007530 Simmondsia chinensis HOM05D007287 ORTHO05D008965 4.2e-21 105.9 202 37.6
PGR031G1010 Punica granatum HOM05D007287 ORTHO05D008965 7.2e-21 105.1 235 36.6
HanXRQChr11g0345021 Helianthus annuus HOM05D007287 ORTHO05D008965 3.6e-20 102.8 201 38.8
EL10Ac6g15481 Beta vulgaris HOM05D007287 ORTHO05D008965 4.7e-20 102.4 206 39.3
PSO384G1025 Papaver somniferum HOM05D007287 ORTHO05D008965 4.7e-20 102.4 243 34.6
AUR62029815 Chenopodium quinoa HOM05D007287 ORTHO05D008965 8.0e-20 101.7 203 38.4
Nitab4.5_0000356g0060 Nicotiana tabacum HOM05D007287 ORTHO05D008965 1.0e-19 101.3 201 39.8
Nitab4.5_0002785g0030 Nicotiana tabacum HOM05D007287 ORTHO05D008965 1.0e-19 101.3 201 39.8
MSTRG.26833 Avicennia marina HOM05D007287 ORTHO05D008965 2.3e-19 100.1 199 37.2
MBI15_g22001_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 2.3e-19 100.1 201 37.8
AUR62006459 Chenopodium quinoa HOM05D007287 ORTHO05D008965 5.2e-19 99.0 203 38.4
PSO339G4161 Papaver somniferum HOM05D007287 ORTHO05D008965 5.2e-19 99.0 252 33.3
PGSC0003DMG400020867 Solanum tuberosum HOM05D007287 ORTHO05D008965 1.2e-18 97.8 222 35.1
arahy.Tifrunner.gnm1.ann1.HN5ZMV Arachis hypogaea HOM05D007287 ORTHO05D008965 2.0e-18 97.1 205 37.6
Ah.02g119260 Amaranthus hybridus HOM05D007287 ORTHO05D008965 5.7e-18 95.5 201 34.8
arahy.Tifrunner.gnm1.ann1.K8RLSB Arachis hypogaea HOM05D007287 ORTHO05D008965 9.8e-18 94.7 205 37.6
MBI15_g05588_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 6.3e-17 92.0 201 37.8
Solyc09g031900.4 Solanum lycopersicum HOM05D007287 ORTHO05D008965 8.3e-17 91.7 201 37.8
Sopen09g026010 Solanum pennellii HOM05D007287 ORTHO05D008965 1.1e-16 91.3 201 37.3
Gohir.A05G415801 Gossypium hirsutum HOM05D007287 ORTHO05D008965 4.1e-16 89.4 199 36.7
DCAR_023246 Daucus carota HOM05D007287 ORTHO05D008965 1.6e-15 87.4 196 35.7
DCAR_014750 Daucus carota HOM05D007287 ORTHO05D008965 1.3e-14 84.3 222 36.0
Aqoxy2G01629 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 6.5e-14 82.0 159 34.6
Lalb_Chr13g0290321 Lupinus albus HOM05D007287 ORTHO05D008965 1.5e-13 80.9 156 37.2
Gohir.A05G415501 Gossypium hirsutum HOM05D007287 ORTHO05D008965 2.5e-13 80.1 200 32.5
VMungo1127G2237 Vigna mungo HOM05D007287 ORTHO05D008965 2.5e-13 80.1 197 35.5
CAN.G616.24 Capsicum annuum HOM05D007287 ORTHO05D008965 3.2e-13 79.7 199 35.2
Medtr8g005070 Medicago truncatula HOM05D007287 ORTHO05D008965 1.2e-12 77.8 208 35.6
TPR.G30730 Trifolium pratense HOM05D007287 ORTHO05D008965 2.1e-12 77.0 210 32.9
HPP92_015439 Vanilla planifolia HOM05D007287 ORTHO05D008965 4.7e-12 75.9 150 34.7
CDE07G0622 Ceratophyllum demersum HOM05D007287 ORTHO05D008965 8.0e-12 75.1 234 26.9
Os11g0119900 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 1.8e-11 73.9 144 31.2
Cc06_g00120 Coffea canephora HOM05D007287 ORTHO05D008965 4.0e-11 72.8 152 40.8
CDE06G1816 Ceratophyllum demersum HOM05D005836 ORTHO05D007335 5.2e-11 72.4 140 33.6
Eucgr.A00853 Eucalyptus grandis HOM05D007287 ORTHO05D008965 5.7e-10 68.9 108 39.8
Os12g0119700 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 5.7e-10 68.9 145 31.0
Zm00001eb078960 Zea mays HOM05D007287 ORTHO05D008965 9.8e-10 68.2 140 28.6
VMungo0464G2164 Vigna mungo HOM05D007287 ORTHO05D008965 1.7e-09 67.4 130 37.7
Os12g0119350 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 2.2e-09 67.0 181 26.5
Actinidia32578 Actinidia chinensis HOM05D007287 ORTHO05D008965 2.0e-07 60.5 140 37.9
Psat2g191120 Pisum sativum HOM05D007287 ORTHO05D008965 3.5e-07 59.7 197 29.4
HPP92_018079 Vanilla planifolia HOM05D007287 ORTHO05D008965 1.0e-06 58.2 147 32.7
HanXRQChr10g0286721 Helianthus annuus HOM05D007287 ORTHO05D008965 1.3e-06 57.8 118 36.4
AT2G28330 Arabidopsis thaliana HOM05D009615 ORTHO05D011760 2.3e-06 57.0 82 45.1
THA.LOC104806658 Tarenaya hassleriana HOM05D009615 ORTHO05D011760 2.3e-06 57.0 150 35.3
Aqoxy1G02348 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 2.9e-06 56.6 137 35.0
Aqoxy1G03140 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 6.6e-06 55.5 106 38.7


User provided reference genes

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