Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 3.7e-302 1040.8 547 100.0
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 2.1e-220 769.2 508 84.3
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 1.7e-174 616.7 457 77.0
Sed0018260 Sechium edule HOM05D006326 ORTHO05D007589 5.6e-133 478.8 407 69.0
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 6.5e-113 412.1 531 52.4
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 6.7e-110 402.1 537 50.8
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 8.7e-110 401.7 524 52.1
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 4.6e-103 379.4 542 50.4
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 7.9e-103 378.6 542 48.2
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 1.8e-99 367.5 536 50.2
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 2.4e-99 367.1 500 51.8
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 5.5e-96 355.9 486 48.4
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 1.6e-95 354.4 520 47.5
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.8e-91 340.9 539 47.5
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 3.4e-90 336.7 537 47.1
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 1.3e-89 334.7 532 47.0
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 1.1e-88 331.6 540 46.1
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 3.6e-87 326.6 548 44.9
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 6.1e-87 325.9 535 45.8
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 9.7e-85 318.5 529 45.7
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 1.4e-83 314.7 520 45.2
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 4.1e-83 313.2 538 45.5
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 2.0e-82 310.8 535 46.0
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.7e-81 307.8 517 45.1
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 2.9e-81 307.0 535 44.3
CiPaw.10G040500 Carya illinoinensis HOM05D006326 ORTHO05D007589 2.7e-79 300.4 480 47.5
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 1.0e-78 298.5 530 44.2
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 2.3e-78 297.4 514 44.0
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 6.7e-78 295.8 526 45.4
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 5.7e-77 292.7 487 45.8
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 3.1e-75 287.0 528 42.4
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 7.0e-75 285.8 550 43.5
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 1.2e-74 285.0 475 44.2
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 4.5e-74 283.1 528 41.7
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 7.7e-74 282.3 486 43.2
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 5.5e-72 276.2 529 42.0
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 5.5e-72 276.2 529 42.0
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 1.3e-68 265.0 514 42.6
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 2.2e-68 264.2 505 42.4
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 2.4e-67 260.8 416 46.6
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 2.4e-67 260.8 515 42.9
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 1.0e-65 255.4 527 42.3
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 3.8e-65 253.4 535 41.7
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 1.1e-64 251.9 532 41.0
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 1.6e-63 248.1 556 39.9
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 4.7e-63 246.5 532 40.2
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 6.1e-63 246.1 464 42.2
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 2.3e-62 244.2 470 41.5
FAN24G3485 Fragaria x ananassa HOM05D006326 ORTHO05D007589 3.0e-62 243.8 504 40.9
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 8.8e-62 242.3 500 41.2
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 1.2e-61 241.9 465 39.4
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 2.0e-61 241.1 528 39.8
CANSAT64G1393 Cannabis sativa HOM05D006326 ORTHO05D007589 1.3e-60 238.4 469 41.2
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 2.2e-60 237.7 531 37.9
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 8.3e-60 235.7 519 40.5
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 2.0e-58 231.1 512 39.1
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 7.8e-58 229.2 520 40.0
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 4.3e-56 223.4 520 38.7
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 1.6e-55 221.5 481 39.9
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 1.0e-54 218.8 521 39.3
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 4.4e-53 213.4 434 39.9
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 9.8e-53 212.2 506 40.1
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 2.9e-52 210.7 548 37.6
TWI53G1954 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 4.9e-52 209.9 480 38.3
Glyma.10G102200 Glycine max HOM05D006326 ORTHO05D007589 1.1e-51 208.8 475 39.8
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 1.4e-51 208.4 527 38.5
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 7.0e-51 206.1 520 38.3
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 1.2e-50 205.3 520 38.1
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 5.9e-50 203.0 555 35.9
Gohir.A09G118300 Gossypium hirsutum HOM05D006326 ORTHO05D007589 1.3e-49 201.8 471 39.7
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 7.3e-48 196.1 537 36.9
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 9.5e-48 195.7 516 37.8
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 2.1e-47 194.5 546 36.1
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 4.0e-46 190.3 518 37.6
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 4.4e-45 186.8 516 38.4
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 5.8e-45 186.4 534 37.1
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 3.7e-44 183.7 516 35.5
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 4.9e-44 183.3 454 37.4
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 1.4e-43 181.8 651 31.8
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 2.0e-42 177.9 509 36.1
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 8.6e-41 172.6 472 36.7
Hund19089 Selenicereus undatus HOM05D006326 ORTHO05D007589 1.2e-39 168.7 553 34.7
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 1.4e-38 165.2 506 35.0
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 1.4e-38 165.2 152 62.5
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 5.2e-38 163.3 502 35.7
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 8.9e-38 162.5 518 33.4
Dinv01681 Davidia involucrata HOM05D006326 ORTHO05D007589 8.9e-38 162.5 432 38.7
PSO384G3095 Papaver somniferum HOM05D006326 ORTHO05D007589 1.2e-37 162.2 477 36.1
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 2.0e-37 161.4 155 61.3
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 4.4e-37 160.2 161 59.6
Thhalv10005957m.g Eutrema salsugineum HOM05D006326 ORTHO05D007589 2.9e-36 157.5 475 36.4
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 3.7e-36 157.1 474 35.0
Nn7g36809 Nelumbo nucifera HOM05D006326 ORTHO05D007589 8.3e-36 156.0 447 36.5
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 1.1e-35 155.6 123 65.0
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 1.4e-35 155.2 122 65.6
PSO339G2802 Papaver somniferum HOM05D006326 ORTHO05D007589 1.9e-35 154.8 479 35.9
CSS0038712 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 5.4e-35 153.3 390 40.5
TPR.G7607 Trifolium pratense HOM05D006326 ORTHO05D007589 9.2e-35 152.5 508 33.3
BolC8t50813H Brassica oleracea HOM05D006326 ORTHO05D007589 2.1e-34 151.4 373 38.1
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 2.7e-34 151.0 485 35.1
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 2.3e-33 147.9 573 32.6
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 3.0e-33 147.5 465 34.0
BcaC07g39981 Brassica carinata HOM05D006326 ORTHO05D007589 1.2e-31 142.1 374 36.9
Pp3c14_4840 Physcomitrium patens HOM05D006326 ORTHO05D007589 4.0e-30 137.1 168 50.6
Mapoly0069s0088 Marchantia polymorpha HOM05D006326 ORTHO05D007589 2.6e-29 134.4 160 52.5
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 6.4e-28 129.8 465 32.0
Hma1.2p1_0975F.1_g243130 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 8.4e-28 129.4 322 38.8
Hma1.2p1_0975F.1_g243140 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 8.4e-28 129.4 322 38.8
PGR142G2735 Punica granatum HOM05D006326 ORTHO05D007589 3.0e-25 120.9 464 30.8
Medtr0722s0010 Medicago truncatula HOM05D006326 ORTHO05D007589 3.3e-24 117.5 77 79.2
Pp3c1_21670 Physcomitrium patens HOM05D006326 ORTHO05D007589 4.4e-21 107.1 113 52.2
SMO351G0508 Selaginella moellendorffii HOM05D006326 ORTHO05D007589 3.8e-20 104.0 168 43.5
Actinidia01833 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.4e-19 102.1 133 50.4
A09p49570 Brassica napus HOM05D006326 ORTHO05D007589 5.4e-19 100.1 451 33.0
BraA09t40410Z Brassica rapa HOM05D006326 ORTHO05D007589 5.4e-19 100.1 451 33.0
AagrBONN_evm.TU.Sc2ySwM_344.979 Anthoceros agrestis HOM05D006326 ORTHO05D007589 1.3e-17 95.5 605 30.1
CSS0022371 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.8e-14 85.1 63 66.7
Zm00001eb185630 Zea mays HOM05D006326 ORTHO05D007589 8.7e-09 66.2 333 29.7
CBR_g50470 Chara braunii HOM05D006326 ORTHO05D007589 3.3e-08 64.3 492 26.2
SGA_v2.0_scaffold66G22262 Striga asiatica HOM05D006326 ORTHO05D007589 7.4e-08 63.2 522 28.0
Mapoly0021s0060 Marchantia polymorpha HOM05D006326 ORTHO05D007589 1.6e-07 62.0 105 38.1


User provided reference genes

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