Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG04G001510 Citrullus lanatus HOM05D001560 ORTHO05D003613 2.2e-70 268.9 136 100.0
arahy.Tifrunner.gnm1.ann1.K9CWE8 Arachis hypogaea HOM05D001560 ORTHO05D003613 9.0e-24 114.0 108 63.0
ClCG10G004690 Citrullus lanatus HOM05D001560 ORTHO05D003613 4.2e-21 105.1 59 89.8
Sed0003843 Sechium edule HOM05D001560 ORTHO05D003613 4.2e-21 105.1 59 89.8
CsaV3_UNG210420 Cucumis sativus L. HOM05D001560 ORTHO05D003613 7.2e-21 104.4 50 100.0
ClCG10G004710 Citrullus lanatus HOM05D001560 ORTHO05D003613 1.8e-19 99.8 59 86.4
CANSAT16G0039 Cannabis sativa HOM05D001560 ORTHO05D003613 8.8e-19 97.4 59 84.7
Ca_14833_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 8.8e-19 97.4 59 84.7
Ca_22165_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 8.8e-19 97.4 59 84.7
LjContig00315g0001212 Lotus japonicus HOM05D001560 ORTHO05D003613 8.8e-19 97.4 59 84.7
BolSC28t60329H Brassica oleracea HOM05D001560 ORTHO05D003613 4.3e-18 95.1 59 83.1
BraSC48t46281Z Brassica rapa HOM05D001560 ORTHO05D003613 4.3e-18 95.1 59 83.1
BraSC77t46661Z Brassica rapa HOM05D001560 ORTHO05D003613 4.3e-18 95.1 59 83.1
CARHR282880 Cardamine hirsuta HOM05D001560 ORTHO05D003613 4.3e-18 95.1 59 83.1
CARHR287190 Cardamine hirsuta HOM05D001560 ORTHO05D003613 4.3e-18 95.1 59 83.1
Cpa.g.sc89.22 Carica papaya HOM05D001560 ORTHO05D003613 4.3e-18 95.1 59 83.1
TPR.G162 Trifolium pratense HOM05D001560 ORTHO05D003613 4.3e-18 95.1 59 83.1
Lj2C1229T3 Lonicera japonica HOM05D001560 ORTHO05D003613 5.7e-18 94.7 59 83.1
Sc04g0005570 Simmondsia chinensis HOM05D001560 ORTHO05D003613 5.7e-18 94.7 59 83.1
Lalb_Chr00c21g0406061 Lupinus albus HOM05D001560 ORTHO05D003613 7.4e-18 94.4 59 83.1
Lalb_Chr00c39g0409051 Lupinus albus HOM05D001560 ORTHO05D003613 7.4e-18 94.4 59 83.1
Lalb_Chr00c39g0409231 Lupinus albus HOM05D001560 ORTHO05D003613 7.4e-18 94.4 59 83.1
Lalb_Chr00c51g0413141 Lupinus albus HOM05D001560 ORTHO05D003613 7.4e-18 94.4 59 83.1
Hund12883 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.3e-17 93.6 79 67.1
Ah.10g028460 Amaranthus hybridus HOM05D001560 ORTHO05D003613 1.7e-17 93.2 50 92.0
AUR62042345 Chenopodium quinoa HOM05D001560 ORTHO05D003613 1.7e-17 93.2 50 92.0
Dinv06700 Davidia involucrata HOM05D001560 ORTHO05D003613 1.7e-17 93.2 59 81.4
HanXRQMTg0579631 Helianthus annuus HOM05D001560 ORTHO05D003613 1.7e-17 93.2 59 81.4
Hma1.2p1_0261F.1_g105120 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 1.7e-17 93.2 59 81.4
Nn1g09975 Nelumbo nucifera HOM05D001560 ORTHO05D003613 2.2e-17 92.8 59 81.4
Nn1g10043 Nelumbo nucifera HOM05D001560 ORTHO05D003613 2.2e-17 92.8 59 81.4
Nn4g26006 Nelumbo nucifera HOM05D001560 ORTHO05D003613 2.2e-17 92.8 59 81.4
SHI36270 Sapria himalayana HOM05D001560 ORTHO05D003613 2.2e-17 92.8 68 73.5
SHI37382 Sapria himalayana HOM05D001560 ORTHO05D003613 2.2e-17 92.8 60 80.0
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 2.2e-17 92.8 68 73.5
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 2.2e-17 92.8 68 73.5
Hund12886 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-17 92.8 50 90.0
Hund27586 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-17 92.8 50 90.0
Hund27816 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-17 92.8 50 90.0
Hund27900 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-17 92.8 50 90.0
Hund28069 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-17 92.8 50 90.0
Hund28082 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-17 92.8 50 90.0
Hund28866 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-17 92.8 50 90.0
Hund28883 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-17 92.8 50 90.0
Hund29084 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-17 92.8 50 90.0
Hund29205 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.2e-17 92.8 50 90.0
DCAR_032442 Daucus carota HOM05D001560 ORTHO05D003613 3.7e-17 92.0 58 82.8
HanXRQChr01g0012841 Helianthus annuus HOM05D001560 ORTHO05D003613 6.3e-17 91.3 51 88.2
SHI36374 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-16 90.5 68 72.1
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-16 90.5 49 91.8
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-16 90.5 49 91.8
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 1.4e-16 90.1 68 72.1
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 1.8e-16 89.7 59 79.7
AUR62038665 Chenopodium quinoa HOM05D001560 ORTHO05D003613 1.8e-16 89.7 50 88.0
Lsat_1_v5_gn_6_108960 Lactuca sativa HOM05D001560 ORTHO05D003613 1.8e-16 89.7 59 79.7
SHI46061 Sapria himalayana HOM05D001560 ORTHO05D003613 1.8e-16 89.7 68 70.6
SHI36625 Sapria himalayana HOM05D001560 ORTHO05D003613 2.4e-16 89.4 68 70.6
SHI40317 Sapria himalayana HOM05D001560 ORTHO05D003613 2.4e-16 89.4 59 78.0
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 2.4e-16 89.4 58 81.0
unitig_87.g27957 Utricularia gibba HOM05D001560 ORTHO05D003613 2.4e-16 89.4 58 81.0
SHI38532 Sapria himalayana HOM05D001560 ORTHO05D003613 3.1e-16 89.0 51 86.3
SHI44217 Sapria himalayana HOM05D001560 ORTHO05D003613 3.1e-16 89.0 51 86.3
ATMG00520 Arabidopsis thaliana HOM05D001560 ORTHO05D003613 4.1e-16 88.6 59 79.7
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 5.3e-16 88.2 58 81.0
CAN.G1321.15 Capsicum annuum HOM05D001560 ORTHO05D003613 5.3e-16 88.2 58 81.0
CAN.G623.2 Capsicum annuum HOM05D001560 ORTHO05D003613 5.3e-16 88.2 58 81.0
Potri.007G062302 Populus trichocarpa HOM05D001560 ORTHO05D003613 5.3e-16 88.2 50 88.0
SabraMtG0009600 Salix brachista HOM05D001560 ORTHO05D003613 5.3e-16 88.2 50 88.0
Sopen11g018210 Solanum pennellii HOM05D001560 ORTHO05D003613 5.3e-16 88.2 58 81.0
SHI39096 Sapria himalayana HOM05D001560 ORTHO05D003613 6.9e-16 87.8 68 69.1
PGR028G0023 Punica granatum HOM05D001560 ORTHO05D003613 9.1e-16 87.4 59 78.0
PGR071G0003 Punica granatum HOM05D001560 ORTHO05D003613 9.1e-16 87.4 59 78.0
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 1.5e-15 86.7 68 69.1
SHI37134 Sapria himalayana HOM05D001560 ORTHO05D003613 1.5e-15 86.7 61 75.4
PSO675G8388 Papaver somniferum HOM05D001560 ORTHO05D003613 2.6e-15 85.9 59 76.3
Sed0013276 Sechium edule HOM05D001560 ORTHO05D003613 3.4e-15 85.5 51 84.3
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 4.5e-15 85.1 68 67.6
SHI45394 Sapria himalayana HOM05D001560 ORTHO05D003613 4.5e-15 85.1 70 65.7
GSVIVG01006203001 Vitis vinifera HOM05D001560 ORTHO05D003613 4.5e-15 85.1 50 84.0
Solyc01g011060.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 5.9e-15 84.7 49 85.7
Peaxi162Scf00348g00514 Petunia axillaris HOM05D001560 ORTHO05D003613 7.7e-15 84.3 48 87.5
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 1.0e-14 84.0 56 80.4
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 2.2e-14 82.8 68 67.6
SHI37855 Sapria himalayana HOM05D001560 ORTHO05D003613 1.4e-13 80.1 68 66.2
CAN.G505.5 Capsicum annuum HOM05D001560 ORTHO05D003613 4.2e-13 78.6 48 81.2
SHI54824 Sapria himalayana HOM05D001560 ORTHO05D003613 7.2e-13 77.8 68 63.2
Nitab4.5_0000280g0190 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.6e-12 76.6 48 81.2
Nitab4.5_0000307g0350 Nicotiana tabacum HOM05D001560 ORTHO05D003613 2.7e-12 75.9 49 77.6
Solyc11g030900.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 2.7e-12 75.9 48 79.2
SHI38214 Sapria himalayana HOM05D001560 ORTHO05D003613 6.1e-12 74.7 51 76.5
Nitab4.5_0001152g1090 Nicotiana tabacum HOM05D001560 ORTHO05D003613 7.9e-12 74.3 49 75.5
Solyc09g056070.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 1.0e-11 73.9 57 70.2
Sp3g25920 Schrenkiella parvula HOM05D001560 ORTHO05D003613 3.9e-11 72.0 59 69.5
SEGI_16710 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 5.1e-11 71.6 51 74.5
SEGI_26668 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 1.5e-10 70.1 51 72.5
SHI36584 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-08 63.9 46 76.1


User provided reference genes

Program Settings